Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054477
CDS Infomation

pacid=37426750 polypeptide=PGSC0003DMP400036652 locus=PGSC0003DMG400021142 ID=PGSC0003DMT400054477.v4.03 annot-version=v4.03
Sequence

ATGTCGGATGCTAAGGCCCCCGCGGCCACCGTTCACCCTAGGAGGAAGATCCAGTTGGTG
GACTTTCTTCTTTCGTTCCGATGGATCATTGTTATCTTTTTTGTCCTTCCATTCTCGTTC
TTGTATTACTTCTCCATATATCTTGGGGATTTGAAGTCTGAGAAGAAATCTTACAAGCAA
CGCCAGATGGAACACGATGAGAATGTTAAAGAGGTTGTGAAGCGCCTTGAACAGAGGAAT
GCAGAAAAGGATGGTCTTGTCTGCACGGCCAGGCCTCCTTGGGTTGTTGTTGGAATGAGA
AACGTAGACTATAAACGTGCTCGTCATTTTGAAGTTGATCTTTCTAAGTTTAGAAATATA
CTTGATATTGACACGGAACGTATGGTTGCCAAAGTTGAGCCTCTTGTCAATATGGGCCAA
ATGTCAAGGGTCGCCATCCCAATGAATCTTTCCCTTGCAGTTCTTGCTGAGCTTGATGAT
CTTACCGTTGGAGGTTTGATCAATGGGTTCGGGGTCGAAGGAAGTTCTCACATCTTTGGA
TTGTTCTCTGACACTGTTGTAGCACTTGAGGTTGTTCTAGCTGATGGAAAGGTTGTTAGA
GCTACAAAGGACAACGAATATTCTGATCTTTTCTACGCTATTCCGTGGTCTCAAGGGACA
TTGGGGCTTCTTGTTTCAGCTGAAATCAAGCTTATACCAGTTGATCAATACGTAAAACTT
ACCTACAAACCTGTAAGGGGTAATCTTAAAGAGCTTGCACAGGCTTACGCGGATTCTTTT
GCACCTAAAGATGGAGATCAGGACAATCCTTCTAAAGTTCCAGAGATGGTAGAAGGCATG
ATTTATGGTCCAACGGAAGGTGTTATGATGACCGGTATGTATGCTTCGAGGAATGAAGCC
AAACGAAGGGGTAATGTAATCAACAATTATGGTTGGTGGTTCAAACCATGGTTTTACCAA
CACGCTCAAACCGCATTGAAAAGAGGGGAGTTTGTGGAGTACATTCCGACTAGGGACTAC
TACCACAGGCACACGAGATCGTTGTATTGGGAAGGGAAACTAATTCTTCCATTTGGTGAT
CAGTTCTGGTTTAGGTTCCTCTTAGGATGGCTCATGCCACCAAAGATTGCTCTGCTCAAA
GCCACACAAAGTGAGGCTATTAGAAACTATTACCATGACCATCATGTCATTCAGGATCTG
CTTGTTCCTCTTTACAAGGTCGGCGATTGTCTCGAATGGGTTCACCGCGAGATGGAGGTA
TATCCCATTTGGCTCTGCCCACACAGAATTTACAAGCTGCCTGTGAGACCAATGATCTAC
CCTGAACCAGGATTCGAGAAACACAAAAGGCAGGGTGACACCGAATATGCACAAATGTAC
ACTGATATTGGTGTCTACTATGTTCCGGGAGCAGTCCTGAGGGGTGAGCCATTTGATGGT
TCAGAGAAATGCCGCCAACTTGAGCTTTGGTTGATAGAAAACCATGGATTTCAGGCTCAA
TACGCGGTGACTGAGCTGACAGAGAAGAATTTCTGGAGGATGTTTGATAACAGTCTGTAC
GAGCAATGCAGAAGGAAGTACAAAGCTATCGGAACGTTCATGAGCGTGTACTATAAATCG
AAGAAAGGAAGGAAGACAGAGAAGGAAGTGCAGGAAGCTGAGCAAGAGAAAGCTGAACAA
GAGACTCCTGAAGCTGATGAACCTGCAAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036652
PEP Infomation

pacid=37426750 transcript=PGSC0003DMT400054477 locus=PGSC0003DMG400021142 ID=PGSC0003DMT400054477.v4.03 annot-version=v4.03
Sequence

MSDAKAPAATVHPRRKIQLVDFLLSFRWIIVIFFVLPFSFLYYFSIYLGDLKSEKKSYKQ
RQMEHDENVKEVVKRLEQRNAEKDGLVCTARPPWVVVGMRNVDYKRARHFEVDLSKFRNI
LDIDTERMVAKVEPLVNMGQMSRVAIPMNLSLAVLAELDDLTVGGLINGFGVEGSSHIFG
LFSDTVVALEVVLADGKVVRATKDNEYSDLFYAIPWSQGTLGLLVSAEIKLIPVDQYVKL
TYKPVRGNLKELAQAYADSFAPKDGDQDNPSKVPEMVEGMIYGPTEGVMMTGMYASRNEA
KRRGNVINNYGWWFKPWFYQHAQTALKRGEFVEYIPTRDYYHRHTRSLYWEGKLILPFGD
QFWFRFLLGWLMPPKIALLKATQSEAIRNYYHDHHVIQDLLVPLYKVGDCLEWVHREMEV
YPIWLCPHRIYKLPVRPMIYPEPGFEKHKRQGDTEYAQMYTDIGVYYVPGAVLRGEPFDG
SEKCRQLELWLIENHGFQAQYAVTELTEKNFWRMFDNSLYEQCRRKYKAIGTFMSVYYKS
KKGRKTEKEVQEAEQEKAEQETPEADEPAN*

Transcript Sequence

Transcript ID

PGSC0003DMT400054477
Transcript Infomation

pacid=37426750 locus=PGSC0003DMG400021142 ID=PGSC0003DMT400054477.v4.03 annot-version=v4.03
Sequence

ATGTCGGATGCTAAGGCCCCCGCGGCCACCGTTCACCCTAGGAGGAAGATCCAGTTGGTG
GACTTTCTTCTTTCGTTCCGATGGATCATTGTTATCTTTTTTGTCCTTCCATTCTCGTTC
TTGTATTACTTCTCCATATATCTTGGGGATTTGAAGTCTGAGAAGAAATCTTACAAGCAA
CGCCAGATGGAACACGATGAGAATGTTAAAGAGGTTGTGAAGCGCCTTGAACAGAGGAAT
GCAGAAAAGGATGGTCTTGTCTGCACGGCCAGGCCTCCTTGGGTTGTTGTTGGAATGAGA
AACGTAGACTATAAACGTGCTCGTCATTTTGAAGTTGATCTTTCTAAGTTTAGAAATATA
CTTGATATTGACACGGAACGTATGGTTGCCAAAGTTGAGCCTCTTGTCAATATGGGCCAA
ATGTCAAGGGTCGCCATCCCAATGAATCTTTCCCTTGCAGTTCTTGCTGAGCTTGATGAT
CTTACCGTTGGAGGTTTGATCAATGGGTTCGGGGTCGAAGGAAGTTCTCACATCTTTGGA
TTGTTCTCTGACACTGTTGTAGCACTTGAGGTTGTTCTAGCTGATGGAAAGGTTGTTAGA
GCTACAAAGGACAACGAATATTCTGATCTTTTCTACGCTATTCCGTGGTCTCAAGGGACA
TTGGGGCTTCTTGTTTCAGCTGAAATCAAGCTTATACCAGTTGATCAATACGTAAAACTT
ACCTACAAACCTGTAAGGGGTAATCTTAAAGAGCTTGCACAGGCTTACGCGGATTCTTTT
GCACCTAAAGATGGAGATCAGGACAATCCTTCTAAAGTTCCAGAGATGGTAGAAGGCATG
ATTTATGGTCCAACGGAAGGTGTTATGATGACCGGTATGTATGCTTCGAGGAATGAAGCC
AAACGAAGGGGTAATGTAATCAACAATTATGGTTGGTGGTTCAAACCATGGTTTTACCAA
CACGCTCAAACCGCATTGAAAAGAGGGGAGTTTGTGGAGTACATTCCGACTAGGGACTAC
TACCACAGGCACACGAGATCGTTGTATTGGGAAGGGAAACTAATTCTTCCATTTGGTGAT
CAGTTCTGGTTTAGGTTCCTCTTAGGATGGCTCATGCCACCAAAGATTGCTCTGCTCAAA
GCCACACAAAGTGAGGCTATTAGAAACTATTACCATGACCATCATGTCATTCAGGATCTG
CTTGTTCCTCTTTACAAGGTCGGCGATTGTCTCGAATGGGTTCACCGCGAGATGGAGGTA
TATCCCATTTGGCTCTGCCCACACAGAATTTACAAGCTGCCTGTGAGACCAATGATCTAC
CCTGAACCAGGATTCGAGAAACACAAAAGGCAGGGTGACACCGAATATGCACAAATGTAC
ACTGATATTGGTGTCTACTATGTTCCGGGAGCAGTCCTGAGGGGTGAGCCATTTGATGGT
TCAGAGAAATGCCGCCAACTTGAGCTTTGGTTGATAGAAAACCATGGATTTCAGGCTCAA
TACGCGGTGACTGAGCTGACAGAGAAGAATTTCTGGAGGATGTTTGATAACAGTCTGTAC
GAGCAATGCAGAAGGAAGTACAAAGCTATCGGAACGTTCATGAGCGTGTACTATAAATCG
AAGAAAGGAAGGAAGACAGAGAAGGAAGTGCAGGAAGCTGAGCAAGAGAAAGCTGAACAA
GAGACTCCTGAAGCTGATGAACCTGCAAATTGA