Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054462
CDS Infomation

pacid=37425297 polypeptide=PGSC0003DMP400036646 locus=PGSC0003DMG401021138 ID=PGSC0003DMT400054462.v4.03 annot-version=v4.03
Sequence

ATGCATTTTGCAGCTGTAGCATATGTCGGAGAGAGCACCCTCCATCCTCTAAAGTACTAT
CACAACATTACTTCAAATACGCTCACTGTCTTAGAAGCTATGTCAGCTCATGGAGTCCCC
ACATTGATTTACTCTAGTACATGTGCAACATATGGAGAGCCTGAAAAGATGCCTATTACT
GAAGAAACTCCACAGCTCCCTATTAATCCATATGGAAAAGCGAAGAAAATGGCAGAGGAT
ATTATTTTGGATTTCCATAAGAACTCAAACATGGCTGTCATGATTTTGAGGTACTTCAAT
GTGATTGGATCTGATCCAGAGGGAAGACTAGGAGAAGCTCCCCGGCCTGAACTTCGTGAA
CATGGGAGAATTTCTGGTGCTTGTTATGATGCAGCTCGTGGAATCTTACCTGATCTTAAG
GTTAGAGGAACAGACTATAAGACAACAGATGGTACATGCATTAGGGATTATATAGATGTC
ACTGATCTGGTTGATGCTCATGTGAAAGCTCTTGAAAAGTCTAGGCCCGGGAAGGTGGGA
ATCTACAACGTTGGAACCGGAAGAGGTAGATCAGTGAAGGAATTTGTGGAGGCTTGCAAG
GCAGCCACTGGAGTTCCTATCAAAGTTGACTTCCTTCCTCGTCGACCTGGTGATTATGCA
GAAGTCTTTAGTGATCCTACTAAGATAAAACTTGAACTGAACTGGACAGCCAAACACACC
GATCTTCAAGAGAGTTTGCAGGTCGCATGGAGATGGCAGAAATCACACCTTAATGGTTAT
GGTTCATCTCTGGTCAAGTCTTCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036646
PEP Infomation

pacid=37425297 transcript=PGSC0003DMT400054462 locus=PGSC0003DMG401021138 ID=PGSC0003DMT400054462.v4.03 annot-version=v4.03
Sequence

MHFAAVAYVGESTLHPLKYYHNITSNTLTVLEAMSAHGVPTLIYSSTCATYGEPEKMPIT
EETPQLPINPYGKAKKMAEDIILDFHKNSNMAVMILRYFNVIGSDPEGRLGEAPRPELRE
HGRISGACYDAARGILPDLKVRGTDYKTTDGTCIRDYIDVTDLVDAHVKALEKSRPGKVG
IYNVGTGRGRSVKEFVEACKAATGVPIKVDFLPRRPGDYAEVFSDPTKIKLELNWTAKHT
DLQESLQVAWRWQKSHLNGYGSSLVKSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400054462
Transcript Infomation

pacid=37425297 locus=PGSC0003DMG401021138 ID=PGSC0003DMT400054462.v4.03 annot-version=v4.03
Sequence

ATGCATTTTGCAGCTGTAGCATATGTCGGAGAGAGCACCCTCCATCCTCTAAAGTACTAT
CACAACATTACTTCAAATACGCTCACTGTCTTAGAAGCTATGTCAGCTCATGGAGTCCCC
ACATTGATTTACTCTAGTACATGTGCAACATATGGAGAGCCTGAAAAGATGCCTATTACT
GAAGAAACTCCACAGCTCCCTATTAATCCATATGGAAAAGCGAAGAAAATGGCAGAGGAT
ATTATTTTGGATTTCCATAAGAACTCAAACATGGCTGTCATGATTTTGAGGTACTTCAAT
GTGATTGGATCTGATCCAGAGGGAAGACTAGGAGAAGCTCCCCGGCCTGAACTTCGTGAA
CATGGGAGAATTTCTGGTGCTTGTTATGATGCAGCTCGTGGAATCTTACCTGATCTTAAG
GTTAGAGGAACAGACTATAAGACAACAGATGGTACATGCATTAGGGATTATATAGATGTC
ACTGATCTGGTTGATGCTCATGTGAAAGCTCTTGAAAAGTCTAGGCCCGGGAAGGTGGGA
ATCTACAACGTTGGAACCGGAAGAGGTAGATCAGTGAAGGAATTTGTGGAGGCTTGCAAG
GCAGCCACTGGAGTTCCTATCAAAGTTGACTTCCTTCCTCGTCGACCTGGTGATTATGCA
GAAGTCTTTAGTGATCCTACTAAGATAAAACTTGAACTGAACTGGACAGCCAAACACACC
GATCTTCAAGAGAGTTTGCAGGTCGCATGGAGATGGCAGAAATCACACCTTAATGGTTAT
GGTTCATCTCTGGTCAAGTCTTCGTAA