Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054404
CDS Infomation

pacid=37428278 polypeptide=PGSC0003DMP400036601 locus=PGSC0003DMG400021117 ID=PGSC0003DMT400054404.v4.03 annot-version=v4.03
Sequence

ATGCTCAGCAGGAGTTATTGCATGTTCTCGGCCACTTATGAGTCCTCTACTTGGTCTTCA
CCCACATATTCTATCTCGCAGTCTAGTAGTGCCAGTACAGCTGCTTCTGGAACACCTTTA
AGTTTTGGAAGAAGAAAGGGAAGAGTTGTTTTCATGGCTGTATCTAATAACAGAGCTAAT
CATAGAAAACTTCCAAAGAACCTTAGAAATCCTCGACGACCCAAGCTACCACCAGATATG
GACTATAGTTTTAATAGGGTCTTGTACGAGGAGGATGAGGGAGTTGCAACTGAGGCTTGT
TCTGATGGAATGGATGAAGAATTGGAGCTGGAAGTAGAAAAAGGAAGGATGTGTGATGAT
GATGGGGGAATTATATGGGAGTCGGATGAGATGGAAGCAATTTCATCTCTTTTTAAAGGG
AGGATCCCTCAGAAGCCTGGAAAATTGGATAGAGAGAGGCCTCTACCTCTGCCCCTTCCT
TACAAGATTCGACCTTTAGGACTTCCTACACAAAAGGGATTCACAAATCGTTCAAGGCAA
TCCATATCAACGCAAGTGTACAAGAATCCTACTTTCTTGATTGGTTTGGCTAAAGAGATA
CAAGGCCTTTCAACTGAGGAAAATGTATCAAAGGTTCTCAGTAAATGGAGTCCATTTCTT
AGGAAAGGATCATTGTCGTTGACAATCCGAGAGTTGGGTTACTTGGGGCTTCCGGAGAGA
GCTCTTGAAACATTCTGTTGGGTGAAGAAACAACCCCATCTTTTCCCAGATGATCATATT
CTTGGTTCTACCATTGAAGTTTTGGCAGGGTCAAATGAGTTGAAAGTGCCATTTGATTTG
GACAAGTTCACTGGCTTGGCAAGTCGGGGTGTGTATGAAGCAATGTTAAGGGGTTATATT
AAAGGAGGAAGCCTGAAGCTTGCTTTGAAGCTACTTTCAATGGCTAAGGAATCTAACAGA
GTGCTTGATACTGGGGTGTATGCTAAGCTAATCTTAGAGCTTGGTAAGGATCCTGATAAA
AGCACACTTGTCTTGGTATTATTAGAGGAGCTTGCTGTGAGAGATGATCTGAATTTGACA
CCACAGGACTGTACAGCTATCATGAAGATTTGCATTAGGCTGGGAAGATTTGAGATCGTG
GAGGGACTATATGACTGGTTCAGGAAATCTGGTGGTAATCCAAGTGTAGTTATGTATACT
ACTCTGATTCACTGTCGTTATTCAGCGAACAACTATAGAGAGGCAATAGACATGCTATGG
GAAATGGAGGCTTCAAATTGCCTTTTTGATCTTCCAGCTTATCGTGTAGTTATTAAGCTT
TTTGTTGCTTTGAACGATCTCTCAAGGGCTGTACGCTATTTCTCTAAACTTAAGGAAGCA
GGTTTTAGTCCAACTTTTGACATATACTGCAGCTTGATCAAAGTTTATATGGCATCTGGA
AGGGTAGCTAAGTGCAAGGATATCTGCAAGGAGGCAGAGATGGCTGGATTCAGGTTTGAC
GAACATACATTGTTAAAGTTGCAACAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036601
PEP Infomation

pacid=37428278 transcript=PGSC0003DMT400054404 locus=PGSC0003DMG400021117 ID=PGSC0003DMT400054404.v4.03 annot-version=v4.03
Sequence

MLSRSYCMFSATYESSTWSSPTYSISQSSSASTAASGTPLSFGRRKGRVVFMAVSNNRAN
HRKLPKNLRNPRRPKLPPDMDYSFNRVLYEEDEGVATEACSDGMDEELELEVEKGRMCDD
DGGIIWESDEMEAISSLFKGRIPQKPGKLDRERPLPLPLPYKIRPLGLPTQKGFTNRSRQ
SISTQVYKNPTFLIGLAKEIQGLSTEENVSKVLSKWSPFLRKGSLSLTIRELGYLGLPER
ALETFCWVKKQPHLFPDDHILGSTIEVLAGSNELKVPFDLDKFTGLASRGVYEAMLRGYI
KGGSLKLALKLLSMAKESNRVLDTGVYAKLILELGKDPDKSTLVLVLLEELAVRDDLNLT
PQDCTAIMKICIRLGRFEIVEGLYDWFRKSGGNPSVVMYTTLIHCRYSANNYREAIDMLW
EMEASNCLFDLPAYRVVIKLFVALNDLSRAVRYFSKLKEAGFSPTFDIYCSLIKVYMASG
RVAKCKDICKEAEMAGFRFDEHTLLKLQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400054404
Transcript Infomation

pacid=37428278 locus=PGSC0003DMG400021117 ID=PGSC0003DMT400054404.v4.03 annot-version=v4.03
Sequence

ATGCTCAGCAGGAGTTATTGCATGTTCTCGGCCACTTATGAGTCCTCTACTTGGTCTTCA
CCCACATATTCTATCTCGCAGTCTAGTAGTGCCAGTACAGCTGCTTCTGGAACACCTTTA
AGTTTTGGAAGAAGAAAGGGAAGAGTTGTTTTCATGGCTGTATCTAATAACAGAGCTAAT
CATAGAAAACTTCCAAAGAACCTTAGAAATCCTCGACGACCCAAGCTACCACCAGATATG
GACTATAGTTTTAATAGGGTCTTGTACGAGGAGGATGAGGGAGTTGCAACTGAGGCTTGT
TCTGATGGAATGGATGAAGAATTGGAGCTGGAAGTAGAAAAAGGAAGGATGTGTGATGAT
GATGGGGGAATTATATGGGAGTCGGATGAGATGGAAGCAATTTCATCTCTTTTTAAAGGG
AGGATCCCTCAGAAGCCTGGAAAATTGGATAGAGAGAGGCCTCTACCTCTGCCCCTTCCT
TACAAGATTCGACCTTTAGGACTTCCTACACAAAAGGGATTCACAAATCGTTCAAGGCAA
TCCATATCAACGCAAGTGTACAAGAATCCTACTTTCTTGATTGGTTTGGCTAAAGAGATA
CAAGGCCTTTCAACTGAGGAAAATGTATCAAAGGTTCTCAGTAAATGGAGTCCATTTCTT
AGGAAAGGATCATTGTCGTTGACAATCCGAGAGTTGGGTTACTTGGGGCTTCCGGAGAGA
GCTCTTGAAACATTCTGTTGGGTGAAGAAACAACCCCATCTTTTCCCAGATGATCATATT
CTTGGTTCTACCATTGAAGTTTTGGCAGGGTCAAATGAGTTGAAAGTGCCATTTGATTTG
GACAAGTTCACTGGCTTGGCAAGTCGGGGTGTGTATGAAGCAATGTTAAGGGGTTATATT
AAAGGAGGAAGCCTGAAGCTTGCTTTGAAGCTACTTTCAATGGCTAAGGAATCTAACAGA
GTGCTTGATACTGGGGTGTATGCTAAGCTAATCTTAGAGCTTGGTAAGGATCCTGATAAA
AGCACACTTGTCTTGGTATTATTAGAGGAGCTTGCTGTGAGAGATGATCTGAATTTGACA
CCACAGGACTGTACAGCTATCATGAAGATTTGCATTAGGCTGGGAAGATTTGAGATCGTG
GAGGGACTATATGACTGGTTCAGGAAATCTGGTGGTAATCCAAGTGTAGTTATGTATACT
ACTCTGATTCACTGTCGTTATTCAGCGAACAACTATAGAGAGGCAATAGACATGCTATGG
GAAATGGAGGCTTCAAATTGCCTTTTTGATCTTCCAGCTTATCGTGTAGTTATTAAGCTT
TTTGTTGCTTTGAACGATCTCTCAAGGGCTGTACGCTATTTCTCTAAACTTAAGGAAGCA
GGTTTTAGTCCAACTTTTGACATATACTGCAGCTTGATCAAAGTTTATATGGCATCTGGA
AGGGTAGCTAAGTGCAAGGATATCTGCAAGGAGGCAGAGATGGCTGGATTCAGGTTTGAC
GAACATACATTGTTAAAGTTGCAACAGTAA