Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054393
CDS Infomation

pacid=37426465 polypeptide=PGSC0003DMP400036593 locus=PGSC0003DMG400021112 ID=PGSC0003DMT400054393.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCAAACTGTATTATGGTTACATTAATCATAATCTTATTGTGGAGTTCTTCT
TCTGTTCTTTCTGATACAATCCCTGAAAAGTTCTACCAATGTATTTGCAAGAATTCTGAT
TTCTCTGACTCTTTTTCCACAGCTTTCTATACCCCAAATGATGCTTCTTTCAACACAATC
TTGAATTCAACAGCTCAAAATCTCAGGTGTTTGATGCCATCAGTGCCTAAACCTGAGCTG
ATTTTCACTCCATTGACAGAACCCCATGTGCAAGCATCTGTAATTTGTGCGAAACAACTC
AATCTTCAGCTCAGAGTTAGGAGTGGAGGGCATGACTATGAGGGGATTTCGTACATTTCT
GAAATGGGATCTCCTTTTGTCATCGTCGATCTCTTGAAGCTTCGAGGGATCGAGGTGAAC
ATAGAGGAGAATTCAGCTTGGGCTCAAGCTGGTGCTACTGTTGGTGAAGTTTATTATAGG
ATTTCAGAGAAAAGCAAAACTCTTGGATTCCCTGCTGGACTCTGTACTAGTTTGGGAATT
GGTGGTCATATTACTGGTGGTGCTTATGGTTCCATGATGAGGAAATTCGGGCTTGGAGTT
GACAATGTGATCGATGCTCATATAGTCAATGCAAATGGAACCATACTCGATAGACAATCG
ATGGGGGAAGACTTATTTTGGGCTATTCGCGGAGGTGGAGGAGCTAGTTTTGGGATCATA
CTTTCTTGGAAAATGAAATTAGTCACTGTTCCATCGATTGTCACTGTTTTCACTGTCCCG
AAAACACTGGAAGACGGAGCAACAAAGATTTTATACAAGTGGCAACAAGTTGCTGACAAA
ATCGACGATGGTCTGTTCATGAGAGTAGTCATAAATGTTGTAGATAAAAAAGATGTAAAA
GGGGAAAGAACTGTTCAAACAGCTTATAACTCATTGTTTCTTGGAAATGCTGAAACACTT
TTACGAATAATGAATGAGTCTTTCCCTGAATTGGGATTGACACAAAAAGATGTTACAGAA
ATGAGTTGGATAGAGTCAATTTTATACATTGCAGGGTACGCGAACAACACGCCACCAGAA
GTACTCCTTCAGGGGAAATCACTATTCAAGAATTACTTCAAAGCCAAATCAGACTTCATA
AAAGAGCCAATACCAGAAACAGGACTCGAAGGCTTATGGAAAAGGCTATTAGAAGAGGAC
TCACCATTGATGATATGGAATCCTTACGGAGGAATGATGGCGAATATATCAGAATCAGAC
ACTCCATTCCCACACAGAAAAGGGGTTATTTTCAAGATTCAGTATTTAACTCTCTGGAAT
CAACCTGATCAAGAATTAGCCACGAAGCACGTCGATTGGATCAGGAAACTCTATAATTAC
ATGACTTCTTATGCATCTATGTACCCAAGAGAAGCCTATGTGAATTACAGAGATCTTGAT
TTAGGAATGAACAAGAATGTGAATCGTAATTCGAGCTTTGCACAAGCTAGTGTGTGGGGG
AACAAGTATTTCAAGAACAATTTTAACAGGCTGGTGCAAATAAAAACTATAGTGGATCCA
GAAAATTTCTTCAAACATGAACAAAGCATCCCAGTAAAGGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400036593
PEP Infomation

pacid=37426465 transcript=PGSC0003DMT400054393 locus=PGSC0003DMG400021112 ID=PGSC0003DMT400054393.v4.03 annot-version=v4.03
Sequence

MASSNCIMVTLIIILLWSSSSVLSDTIPEKFYQCICKNSDFSDSFSTAFYTPNDASFNTI
LNSTAQNLRCLMPSVPKPELIFTPLTEPHVQASVICAKQLNLQLRVRSGGHDYEGISYIS
EMGSPFVIVDLLKLRGIEVNIEENSAWAQAGATVGEVYYRISEKSKTLGFPAGLCTSLGI
GGHITGGAYGSMMRKFGLGVDNVIDAHIVNANGTILDRQSMGEDLFWAIRGGGGASFGII
LSWKMKLVTVPSIVTVFTVPKTLEDGATKILYKWQQVADKIDDGLFMRVVINVVDKKDVK
GERTVQTAYNSLFLGNAETLLRIMNESFPELGLTQKDVTEMSWIESILYIAGYANNTPPE
VLLQGKSLFKNYFKAKSDFIKEPIPETGLEGLWKRLLEEDSPLMIWNPYGGMMANISESD
TPFPHRKGVIFKIQYLTLWNQPDQELATKHVDWIRKLYNYMTSYASMYPREAYVNYRDLD
LGMNKNVNRNSSFAQASVWGNKYFKNNFNRLVQIKTIVDPENFFKHEQSIPVKG*

Transcript Sequence

Transcript ID

PGSC0003DMT400054393
Transcript Infomation

pacid=37426465 locus=PGSC0003DMG400021112 ID=PGSC0003DMT400054393.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCAAACTGTATTATGGTTACATTAATCATAATCTTATTGTGGAGTTCTTCT
TCTGTTCTTTCTGATACAATCCCTGAAAAGTTCTACCAATGTATTTGCAAGAATTCTGAT
TTCTCTGACTCTTTTTCCACAGCTTTCTATACCCCAAATGATGCTTCTTTCAACACAATC
TTGAATTCAACAGCTCAAAATCTCAGGTGTTTGATGCCATCAGTGCCTAAACCTGAGCTG
ATTTTCACTCCATTGACAGAACCCCATGTGCAAGCATCTGTAATTTGTGCGAAACAACTC
AATCTTCAGCTCAGAGTTAGGAGTGGAGGGCATGACTATGAGGGGATTTCGTACATTTCT
GAAATGGGATCTCCTTTTGTCATCGTCGATCTCTTGAAGCTTCGAGGGATCGAGGTGAAC
ATAGAGGAGAATTCAGCTTGGGCTCAAGCTGGTGCTACTGTTGGTGAAGTTTATTATAGG
ATTTCAGAGAAAAGCAAAACTCTTGGATTCCCTGCTGGACTCTGTACTAGTTTGGGAATT
GGTGGTCATATTACTGGTGGTGCTTATGGTTCCATGATGAGGAAATTCGGGCTTGGAGTT
GACAATGTGATCGATGCTCATATAGTCAATGCAAATGGAACCATACTCGATAGACAATCG
ATGGGGGAAGACTTATTTTGGGCTATTCGCGGAGGTGGAGGAGCTAGTTTTGGGATCATA
CTTTCTTGGAAAATGAAATTAGTCACTGTTCCATCGATTGTCACTGTTTTCACTGTCCCG
AAAACACTGGAAGACGGAGCAACAAAGATTTTATACAAGTGGCAACAAGTTGCTGACAAA
ATCGACGATGGTCTGTTCATGAGAGTAGTCATAAATGTTGTAGATAAAAAAGATGTAAAA
GGGGAAAGAACTGTTCAAACAGCTTATAACTCATTGTTTCTTGGAAATGCTGAAACACTT
TTACGAATAATGAATGAGTCTTTCCCTGAATTGGGATTGACACAAAAAGATGTTACAGAA
ATGAGTTGGATAGAGTCAATTTTATACATTGCAGGGTACGCGAACAACACGCCACCAGAA
GTACTCCTTCAGGGGAAATCACTATTCAAGAATTACTTCAAAGCCAAATCAGACTTCATA
AAAGAGCCAATACCAGAAACAGGACTCGAAGGCTTATGGAAAAGGCTATTAGAAGAGGAC
TCACCATTGATGATATGGAATCCTTACGGAGGAATGATGGCGAATATATCAGAATCAGAC
ACTCCATTCCCACACAGAAAAGGGGTTATTTTCAAGATTCAGTATTTAACTCTCTGGAAT
CAACCTGATCAAGAATTAGCCACGAAGCACGTCGATTGGATCAGGAAACTCTATAATTAC
ATGACTTCTTATGCATCTATGTACCCAAGAGAAGCCTATGTGAATTACAGAGATCTTGAT
TTAGGAATGAACAAGAATGTGAATCGTAATTCGAGCTTTGCACAAGCTAGTGTGTGGGGG
AACAAGTATTTCAAGAACAATTTTAACAGGCTGGTGCAAATAAAAACTATAGTGGATCCA
GAAAATTTCTTCAAACATGAACAAAGCATCCCAGTAAAGGGATGA