Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054356
CDS Infomation

pacid=37427413 polypeptide=PGSC0003DMP400036563 locus=PGSC0003DMG400021098 ID=PGSC0003DMT400054356.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGCTGCAATCATATTCTTTCTGAGAAGGCTAGGCTATCAGTTAATACAAGAA
GGAAATGTTCTATCAGGTGTGCAAGATGAAATTGAGTGGATGAAGAAAGAGTTTGAAGCC
ATGGTAGCTTTTCTAAAAGATGCTGACAAGAGGCAACAGAGAGATGAAACTGTGGCTGGT
TGGGTAAAAGAGGTAAGAATCTTGGCTTTTAATGCTGAAGATGTTATTGATGAATTTCTT
ATTCAAATGGCTGCTACTCATTGGAATAGCTTATACTTCTTTAAGTACTTGAAAATAAGG
TATCAAATTGGCTCTCATATTAGAAAACTCAAGAAACAAGTCATTGAAGTCAAAGAAAGA
AAAGATAGATATGTTATCAATGGATTAATGATGTGTGAAGATGCATTAGCAGCTAGTAGC
TATAGAGGCACTGGTGGGATGTCCTCTAGAGGGCCTGGTGCAGCATCCCCTTTTGTTCGA
GAAGACGATATTGTGGGAATTGAACATGATGTTGAACAGCTAATGAAACTCGTATTAGAA
GGGAATGTGAAGAATTTCCTCGCGGTTTCAGTGTTTGGTATGGGGGGTTTGGGCAAAACT
ACTCTTGTGAAAGAAGTTTTCAAGAAGTCAAAAGCGTTGTTTGATTGCCATTCTTGGGTT
TTCGTGTCACAATCTTGTAATTTAAAGGATGTCTTGAAACACATCCTCTTTGGATTCATA
GCTAGTAGAGGAGAGCCAGCTCTGGATGTAATGGGTGCCATGGATGAGGGATGGTTACTG
GAGAGGATCAATGACTACTTGCAAGACAAGAAGTACTTGCTGGTTCTTGATGATATATGG
GATGATAACCTATGGGAAGAGCTTAAACATGCATTTCCACGAAGAAAAGGGCGAATCATA
ATTACAACAAGACTTCGCGGTATAGCATCTCCTCTTGAGGATAATTTCCACATCTATGAT
CTCCAACCCCTCCCTTATGAATTATCTTGGAGAATCTTTTGCAAGAAGGCGTTTCGATCA
TCTCAGGGGACTTGTCCTGATGACTTGAAGGAATTCGCGGAGGCCATAGTGAGAAAATGT
GGAGGTTTGCCTCTTGCAATTGTGGCCATCGGAGGCTTATTGTCGTGTAAGGGAAGAAAT
ACTCGTGTGTGGCAATCTGTTCTTGATACCTTAGATTGGGAATTCAACCATAACCGAGAC
ATTGAGCGTCTAAACAAGGCCTTGTTGTTCAGCTATATTCACCTTCCATTTTACCTCAAG
TATTGTTTCCTTTATCTCGGTTTGTTCCCTGAGGACTATGAGATTGGAAGGAAAAGGCTG
ATCCGAATGTGGGTGGCCGAGGGGTTTGTTGAGGGAACTGCTCAGAGAACAGAGGAAGAG
GTCGCGAACCATTACTTTGTGCAGCTTACTGACAGGAGTATGATTCAAGCAGTCACTATA
CATGCTCGAGATGTGGTGAAAGCGTGCAAGCTGCATGATCTAGTGCGTGATGTGGCCAAT
CAAATGCTACAGGAAGAGAAATTTGGATCCATCATAGAAGAAGTCGACAAGACCATTCAA
GAGAGACAAAGGAGACTTGCAATCTATGAAGATGCAGATAGTATCCCCTCAGACATCAGT
AAGTTGAATCTGAGGTCCCTTCTCTTTTTTAGAATAAATGAATTGTCATTTTCTGCTCTA
CAAAAACTGCTAAGGCAGCTCAGATTGGTAAGAGTTGTAGATTTACAATATGCTCCTCTA
GAAAAACTACCAAATGAGATTGGTAATTTGATTCATCTCCGGTACTTAGATTTAAGAGGG
ACTTTGATAAACGAACTTCCAAAATCAGTGAAGAATTTGAGGAATCTACAGACATTGGAT
GTGAGAAACACGGAAGTTAAACATTTGCCTGCTGGAATCAATGAGCTGCAACACTTAAGA
CATCTTCTCCTGTCAAGTTTCCGTGACAGAGAAAATGGATTTGTGAAGATGGCTAGTGGG
GGAAAAGACTTTGTGAAGCTACAAACACTATCTGGAATTGAATCAGATGAAGACTTAGTT
AAACAACTTAGAAGTTTAACAAGCTTGAGGAAAGTCTACATAGGGAAAATGACACAAGCC
AACAGCGGAGATTTTTGCCAATCATTAGAAAGGATGAGCAAGTTGAGGTCCTTAACAGTG
TTAAGTGAGAGTCCATTTGAGCAAAACATACAAATGGAATCGCTCACAAAGTCCACTAAG
CACTTAGAGAAACTCAAACTCCAAGTCCATATGAAAAAACTGCCAGGATGGTTCGATTCT
CTTAGTTGCCTTCACTCATTGTACCTTTTCAAGAACTTCTTAACAGAAGATCCATTTCCT
ATACTTGGAAAGCTTCCAAGCCTAGCTATTCTGACATTAGCATCTTCAGCTTACGTAAAC
AGCATCGTTAACATCCCTCCGGGAGGATTTCCTAAGCTCAAACTGTTGAGGATTCTTGGC
ATGGAAAATTGGACTACTTGGATGCCTATTGAGAAGGGTTCTATGCCAGAAATTCAGTTT
CTTCTGATAGCTAATTGTCCAAGGCTAACTAACTTACCAGATGGCTTCAATCACCTTACT
AGCCTTGATGATCTCACCCTTATGGGCATGTCCCTCTTTTTCGCTCATAAATTGCAGAGT
AGAGATAAGTGGAAAGTCACTCATGTCAAGGAAGTTTCAATCATTTCAGAAGTCAATGGC
CAAATTGTCAAGAAAAAACTCAACACTCCTCTTGTTAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036563
PEP Infomation

pacid=37427413 transcript=PGSC0003DMT400054356 locus=PGSC0003DMG400021098 ID=PGSC0003DMT400054356.v4.03 annot-version=v4.03
Sequence

MAEAAIIFFLRRLGYQLIQEGNVLSGVQDEIEWMKKEFEAMVAFLKDADKRQQRDETVAG
WVKEVRILAFNAEDVIDEFLIQMAATHWNSLYFFKYLKIRYQIGSHIRKLKKQVIEVKER
KDRYVINGLMMCEDALAASSYRGTGGMSSRGPGAASPFVREDDIVGIEHDVEQLMKLVLE
GNVKNFLAVSVFGMGGLGKTTLVKEVFKKSKALFDCHSWVFVSQSCNLKDVLKHILFGFI
ASRGEPALDVMGAMDEGWLLERINDYLQDKKYLLVLDDIWDDNLWEELKHAFPRRKGRII
ITTRLRGIASPLEDNFHIYDLQPLPYELSWRIFCKKAFRSSQGTCPDDLKEFAEAIVRKC
GGLPLAIVAIGGLLSCKGRNTRVWQSVLDTLDWEFNHNRDIERLNKALLFSYIHLPFYLK
YCFLYLGLFPEDYEIGRKRLIRMWVAEGFVEGTAQRTEEEVANHYFVQLTDRSMIQAVTI
HARDVVKACKLHDLVRDVANQMLQEEKFGSIIEEVDKTIQERQRRLAIYEDADSIPSDIS
KLNLRSLLFFRINELSFSALQKLLRQLRLVRVVDLQYAPLEKLPNEIGNLIHLRYLDLRG
TLINELPKSVKNLRNLQTLDVRNTEVKHLPAGINELQHLRHLLLSSFRDRENGFVKMASG
GKDFVKLQTLSGIESDEDLVKQLRSLTSLRKVYIGKMTQANSGDFCQSLERMSKLRSLTV
LSESPFEQNIQMESLTKSTKHLEKLKLQVHMKKLPGWFDSLSCLHSLYLFKNFLTEDPFP
ILGKLPSLAILTLASSAYVNSIVNIPPGGFPKLKLLRILGMENWTTWMPIEKGSMPEIQF
LLIANCPRLTNLPDGFNHLTSLDDLTLMGMSLFFAHKLQSRDKWKVTHVKEVSIISEVNG
QIVKKKLNTPLVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400054356
Transcript Infomation

pacid=37427413 locus=PGSC0003DMG400021098 ID=PGSC0003DMT400054356.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGCTGCAATCATATTCTTTCTGAGAAGGCTAGGCTATCAGTTAATACAAGAA
GGAAATGTTCTATCAGGTGTGCAAGATGAAATTGAGTGGATGAAGAAAGAGTTTGAAGCC
ATGGTAGCTTTTCTAAAAGATGCTGACAAGAGGCAACAGAGAGATGAAACTGTGGCTGGT
TGGGTAAAAGAGGTAAGAATCTTGGCTTTTAATGCTGAAGATGTTATTGATGAATTTCTT
ATTCAAATGGCTGCTACTCATTGGAATAGCTTATACTTCTTTAAGTACTTGAAAATAAGG
TATCAAATTGGCTCTCATATTAGAAAACTCAAGAAACAAGTCATTGAAGTCAAAGAAAGA
AAAGATAGATATGTTATCAATGGATTAATGATGTGTGAAGATGCATTAGCAGCTAGTAGC
TATAGAGGCACTGGTGGGATGTCCTCTAGAGGGCCTGGTGCAGCATCCCCTTTTGTTCGA
GAAGACGATATTGTGGGAATTGAACATGATGTTGAACAGCTAATGAAACTCGTATTAGAA
GGGAATGTGAAGAATTTCCTCGCGGTTTCAGTGTTTGGTATGGGGGGTTTGGGCAAAACT
ACTCTTGTGAAAGAAGTTTTCAAGAAGTCAAAAGCGTTGTTTGATTGCCATTCTTGGGTT
TTCGTGTCACAATCTTGTAATTTAAAGGATGTCTTGAAACACATCCTCTTTGGATTCATA
GCTAGTAGAGGAGAGCCAGCTCTGGATGTAATGGGTGCCATGGATGAGGGATGGTTACTG
GAGAGGATCAATGACTACTTGCAAGACAAGAAGTACTTGCTGGTTCTTGATGATATATGG
GATGATAACCTATGGGAAGAGCTTAAACATGCATTTCCACGAAGAAAAGGGCGAATCATA
ATTACAACAAGACTTCGCGGTATAGCATCTCCTCTTGAGGATAATTTCCACATCTATGAT
CTCCAACCCCTCCCTTATGAATTATCTTGGAGAATCTTTTGCAAGAAGGCGTTTCGATCA
TCTCAGGGGACTTGTCCTGATGACTTGAAGGAATTCGCGGAGGCCATAGTGAGAAAATGT
GGAGGTTTGCCTCTTGCAATTGTGGCCATCGGAGGCTTATTGTCGTGTAAGGGAAGAAAT
ACTCGTGTGTGGCAATCTGTTCTTGATACCTTAGATTGGGAATTCAACCATAACCGAGAC
ATTGAGCGTCTAAACAAGGCCTTGTTGTTCAGCTATATTCACCTTCCATTTTACCTCAAG
TATTGTTTCCTTTATCTCGGTTTGTTCCCTGAGGACTATGAGATTGGAAGGAAAAGGCTG
ATCCGAATGTGGGTGGCCGAGGGGTTTGTTGAGGGAACTGCTCAGAGAACAGAGGAAGAG
GTCGCGAACCATTACTTTGTGCAGCTTACTGACAGGAGTATGATTCAAGCAGTCACTATA
CATGCTCGAGATGTGGTGAAAGCGTGCAAGCTGCATGATCTAGTGCGTGATGTGGCCAAT
CAAATGCTACAGGAAGAGAAATTTGGATCCATCATAGAAGAAGTCGACAAGACCATTCAA
GAGAGACAAAGGAGACTTGCAATCTATGAAGATGCAGATAGTATCCCCTCAGACATCAGT
AAGTTGAATCTGAGGTCCCTTCTCTTTTTTAGAATAAATGAATTGTCATTTTCTGCTCTA
CAAAAACTGCTAAGGCAGCTCAGATTGGTAAGAGTTGTAGATTTACAATATGCTCCTCTA
GAAAAACTACCAAATGAGATTGGTAATTTGATTCATCTCCGGTACTTAGATTTAAGAGGG
ACTTTGATAAACGAACTTCCAAAATCAGTGAAGAATTTGAGGAATCTACAGACATTGGAT
GTGAGAAACACGGAAGTTAAACATTTGCCTGCTGGAATCAATGAGCTGCAACACTTAAGA
CATCTTCTCCTGTCAAGTTTCCGTGACAGAGAAAATGGATTTGTGAAGATGGCTAGTGGG
GGAAAAGACTTTGTGAAGCTACAAACACTATCTGGAATTGAATCAGATGAAGACTTAGTT
AAACAACTTAGAAGTTTAACAAGCTTGAGGAAAGTCTACATAGGGAAAATGACACAAGCC
AACAGCGGAGATTTTTGCCAATCATTAGAAAGGATGAGCAAGTTGAGGTCCTTAACAGTG
TTAAGTGAGAGTCCATTTGAGCAAAACATACAAATGGAATCGCTCACAAAGTCCACTAAG
CACTTAGAGAAACTCAAACTCCAAGTCCATATGAAAAAACTGCCAGGATGGTTCGATTCT
CTTAGTTGCCTTCACTCATTGTACCTTTTCAAGAACTTCTTAACAGAAGATCCATTTCCT
ATACTTGGAAAGCTTCCAAGCCTAGCTATTCTGACATTAGCATCTTCAGCTTACGTAAAC
AGCATCGTTAACATCCCTCCGGGAGGATTTCCTAAGCTCAAACTGTTGAGGATTCTTGGC
ATGGAAAATTGGACTACTTGGATGCCTATTGAGAAGGGTTCTATGCCAGAAATTCAGTTT
CTTCTGATAGCTAATTGTCCAAGGCTAACTAACTTACCAGATGGCTTCAATCACCTTACT
AGCCTTGATGATCTCACCCTTATGGGCATGTCCCTCTTTTTCGCTCATAAATTGCAGAGT
AGAGATAAGTGGAAAGTCACTCATGTCAAGGAAGTTTCAATCATTTCAGAAGTCAATGGC
CAAATTGTCAAGAAAAAACTCAACACTCCTCTTGTTAACTAG