Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054355
CDS Infomation

pacid=37426665 polypeptide=PGSC0003DMP400036562 locus=PGSC0003DMG402021097 ID=PGSC0003DMT400054355.v4.03 annot-version=v4.03
Sequence

ATGGACTCCACTTCTGGGCAACTTGAACCAGCATCTGGAGCTCGCGCTAGTATTCCTGGG
AAGGAGTACTGGCCAGAAGGCACAGCTAGTCGAGTTCAGGCCGCCAGGGCTCCTGAACCA
GTTGGTATTTCAACTGGAACTCCATCTTATGGAAAAACTCCTGGAAGTAGACGAAAGAAG
TACAAGGCATCTGCTTCCACTTCCCAGCCTTCAGAAATCAATGTAATTTCTGATGATCCT
CTGGAGACTCCAGATAATGTACCAGAAGAGCCAAAGGATCTTTCCTCAGAGTATGTCATT
TATCAGCCTGAACAAGATGAAGAGGAGCTGACAGGCTATGAGCTGGATAAAAGACATGGA
CGGCCCCACCCATTTATTGATCCAAAGGCAAAGAAGGAAATAGAGAAGCCACTTACTAGT
GAAGAACTATGGTGGAATTGGAGAAAACCTGAGAAGGAGCAATGGTCTAGGTGGCAGAGG
CGGCGCCCTGATGTTGAAACGGTGTTTCTTAAAGCTATGGCAGAGACAGGACAAGTAAAG
CTCTATGGTGAGCATCCTACATTGACAGAGACTGCGCTCTATAGAGCAAGGAGACATTTA
TATAAGGAGGAAAGGCTACAGGCTGAAAAAGAAAAAATGGAAAAGATTGGTCCTATTGCA
TACTACTCAGAGTGGGTCAAAGCTTGGAAGAGAGATACTTCTCGAGAGGCCATTCAAAAG
CATTTTGAAGAGACTGGTGAAGACGAGAACACTCAACTCATCGAAATGTTCTCCCATCAA
ACAGATCGTGAATACCGCATAATGATGGGAACTGATATGCGTATTCCTCGTGACCCGTTG
GCCATGAGAATGCGGGAGGATCAAATAAAACAAATTTGGGGTGGAGATCCAGTTTACCCG
ACCATTAATTACATTCAAGATCCAGATGAAGTGATTGATTTCAGGGGTCCAGACTTCCAT
GAACCAACACCAAATATGTTGGCCTATTTGAAAGAGCATGGCAAAATAATATCAAGAGAG
GAGCTAGAGAAAATTCTGGCCAAAGAGAAGACGGAAGAAATTGAGGTGGCAGAAATTGAT
GAAGCTATGGCAAGAGCTGTTGACATTGGTGAAAATGATGATGAAGAAGAAGGAAGTGAG
GCTGAAGGTGAAGAGGAGGATGAGAAAATTACACGCAATTGGAGTGTTTTGAAAAGTAAT
CCCGAGCTTAGCAAATCAAAGGGTAAACCCAAAAACAAAGACATGTCTCTGGAGGAAGCT
GTAGACGATTCTGAAAATTTAACAGACTTCCTTATGGACTTTGACGAGGATGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036562
PEP Infomation

pacid=37426665 transcript=PGSC0003DMT400054355 locus=PGSC0003DMG402021097 ID=PGSC0003DMT400054355.v4.03 annot-version=v4.03
Sequence

MDSTSGQLEPASGARASIPGKEYWPEGTASRVQAARAPEPVGISTGTPSYGKTPGSRRKK
YKASASTSQPSEINVISDDPLETPDNVPEEPKDLSSEYVIYQPEQDEEELTGYELDKRHG
RPHPFIDPKAKKEIEKPLTSEELWWNWRKPEKEQWSRWQRRRPDVETVFLKAMAETGQVK
LYGEHPTLTETALYRARRHLYKEERLQAEKEKMEKIGPIAYYSEWVKAWKRDTSREAIQK
HFEETGEDENTQLIEMFSHQTDREYRIMMGTDMRIPRDPLAMRMREDQIKQIWGGDPVYP
TINYIQDPDEVIDFRGPDFHEPTPNMLAYLKEHGKIISREELEKILAKEKTEEIEVAEID
EAMARAVDIGENDDEEEGSEAEGEEEDEKITRNWSVLKSNPELSKSKGKPKNKDMSLEEA
VDDSENLTDFLMDFDEDE*

Transcript Sequence

Transcript ID

PGSC0003DMT400054355
Transcript Infomation

pacid=37426665 locus=PGSC0003DMG402021097 ID=PGSC0003DMT400054355.v4.03 annot-version=v4.03
Sequence

ATGGACTCCACTTCTGGGCAACTTGAACCAGCATCTGGAGCTCGCGCTAGTATTCCTGGG
AAGGAGTACTGGCCAGAAGGCACAGCTAGTCGAGTTCAGGCCGCCAGGGCTCCTGAACCA
GTTGGTATTTCAACTGGAACTCCATCTTATGGAAAAACTCCTGGAAGTAGACGAAAGAAG
TACAAGGCATCTGCTTCCACTTCCCAGCCTTCAGAAATCAATGTAATTTCTGATGATCCT
CTGGAGACTCCAGATAATGTACCAGAAGAGCCAAAGGATCTTTCCTCAGAGTATGTCATT
TATCAGCCTGAACAAGATGAAGAGGAGCTGACAGGCTATGAGCTGGATAAAAGACATGGA
CGGCCCCACCCATTTATTGATCCAAAGGCAAAGAAGGAAATAGAGAAGCCACTTACTAGT
GAAGAACTATGGTGGAATTGGAGAAAACCTGAGAAGGAGCAATGGTCTAGGTGGCAGAGG
CGGCGCCCTGATGTTGAAACGGTGTTTCTTAAAGCTATGGCAGAGACAGGACAAGTAAAG
CTCTATGGTGAGCATCCTACATTGACAGAGACTGCGCTCTATAGAGCAAGGAGACATTTA
TATAAGGAGGAAAGGCTACAGGCTGAAAAAGAAAAAATGGAAAAGATTGGTCCTATTGCA
TACTACTCAGAGTGGGTCAAAGCTTGGAAGAGAGATACTTCTCGAGAGGCCATTCAAAAG
CATTTTGAAGAGACTGGTGAAGACGAGAACACTCAACTCATCGAAATGTTCTCCCATCAA
ACAGATCGTGAATACCGCATAATGATGGGAACTGATATGCGTATTCCTCGTGACCCGTTG
GCCATGAGAATGCGGGAGGATCAAATAAAACAAATTTGGGGTGGAGATCCAGTTTACCCG
ACCATTAATTACATTCAAGATCCAGATGAAGTGATTGATTTCAGGGGTCCAGACTTCCAT
GAACCAACACCAAATATGTTGGCCTATTTGAAAGAGCATGGCAAAATAATATCAAGAGAG
GAGCTAGAGAAAATTCTGGCCAAAGAGAAGACGGAAGAAATTGAGGTGGCAGAAATTGAT
GAAGCTATGGCAAGAGCTGTTGACATTGGTGAAAATGATGATGAAGAAGAAGGAAGTGAG
GCTGAAGGTGAAGAGGAGGATGAGAAAATTACACGCAATTGGAGTGTTTTGAAAAGTAAT
CCCGAGCTTAGCAAATCAAAGGGTAAACCCAAAAACAAAGACATGTCTCTGGAGGAAGCT
GTAGACGATTCTGAAAATTTAACAGACTTCCTTATGGACTTTGACGAGGATGAGTGA