Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054340
CDS Infomation

pacid=37425226 polypeptide=PGSC0003DMP400036551 locus=PGSC0003DMG400021091 ID=PGSC0003DMT400054340.v4.03 annot-version=v4.03
Sequence

ATGATTGCTGATAGATATCCTGATTCGAAAAAGACATGGATTGGTGCTGTATATCCAGAT
TTCAAGCAACTAAGTGTTGGTGACAGATACATAACCTCATTGTATTGGTCTATTGTAACG
CTGACAACAACCGGTTATGGAGACTTGCATGCTGAGAACTCAAGAGAGATGCTGTTTGAT
ATCTTTTACATGTTATTCAACTTGGGATTGACATCTTACATAATTGGAAACATGACTAAC
CTTGTTGTTCATTGGACTAGTCGCACCAGAAACTTCAGGGAGGCAGTGAAAGCAGCTCAA
GAATTCGCGAAAAGGAATCAGTTGCCTCCAAGAGTACAAGATCAGGTTTTGTCTCACATG
TGTCTCAAGTTCAAAACAGAAACATTAAAACAAGAAGAGACTCTTAATGGCCTGCCTAAA
GCCATCAGAACAAGCATTGCACACCATCTGTTTTTTCCTATAGTTCAAAATGTTCATTTG
TTCCAAGGTGTTTCGCGGAACCTCCTTTTCCAACTGGTTCCTGAAATGGAAGCTGAATAC
TTCCCTCCGAAGCAAGAAGTAATTTTGCAGAATGAGGCACCAACTGATCTGTATATAATA
GTTTCAGGAGCAGTGGAATTTATAGCACAGATTGAAGGGCTAGAGCAAATAATTGGAAAG
GCTGTTGCAGGAGAAATATTTGGAGACATAGGTGTTTTATGTGGGAGACCACAGCCATTT
GCTGTTCGAACTACCGAGATTTCTCAGATTCTAAGGCTAAGTAGGACATCATTGATGAAC
ATTCTTCGCGCAAATCCAGAAGATGAATGTATAATTATGAACAATCTTTTGATGAAACTT
CAGGGATTTGGAGGATTTGGTTATGTGGACCACCAAACAAATGCAGGACCAGAAATCAAA
AGGCATGATGATATCACACTTACTAGCATAGATATCAATAATTTGGAAGCTAGAGTTAAG
AAGCAAGAGAGAGATGATGGACAAGAAGTAAACAAAACCATGAATGATTTGTCATTAAAT
CTTGAAAATAAGAGTGAGTTAAGTGAGCATAAAGTGGAGCTCATTGGACCAGATGAGGGA
ACAAAGAGCTGTCAACTGAAGCCTGAGGTCCCCAGTTGTTCCAACTCTTGCCTAAAAAGA
CCCACATGTAGTACCAGTTCAAGTGGCTCTCAAGGGACAAAATCTACCCACCATAAGAAG
AGAATCACCATTCACGTGAAAAAAGAATCATTGCATCAACAGTTTGGGAAACTAATCATT
CTACCGGATTCACTACAAGAGCTATTCAGAGTAGCAGGTCAAAGATTTGGAAGCTACGAT
TTCAAGAGAGCTGTAAATGCAGAGGATGCTGAAATAGATGACATTGATGTCATCAGAGAT
GGCGACCATCTGTTTTTCCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036551
PEP Infomation

pacid=37425226 transcript=PGSC0003DMT400054340 locus=PGSC0003DMG400021091 ID=PGSC0003DMT400054340.v4.03 annot-version=v4.03
Sequence

MIADRYPDSKKTWIGAVYPDFKQLSVGDRYITSLYWSIVTLTTTGYGDLHAENSREMLFD
IFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFREAVKAAQEFAKRNQLPPRVQDQVLSHM
CLKFKTETLKQEETLNGLPKAIRTSIAHHLFFPIVQNVHLFQGVSRNLLFQLVPEMEAEY
FPPKQEVILQNEAPTDLYIIVSGAVEFIAQIEGLEQIIGKAVAGEIFGDIGVLCGRPQPF
AVRTTEISQILRLSRTSLMNILRANPEDECIIMNNLLMKLQGFGGFGYVDHQTNAGPEIK
RHDDITLTSIDINNLEARVKKQERDDGQEVNKTMNDLSLNLENKSELSEHKVELIGPDEG
TKSCQLKPEVPSCSNSCLKRPTCSTSSSGSQGTKSTHHKKRITIHVKKESLHQQFGKLII
LPDSLQELFRVAGQRFGSYDFKRAVNAEDAEIDDIDVIRDGDHLFFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400054340
Transcript Infomation

pacid=37425226 locus=PGSC0003DMG400021091 ID=PGSC0003DMT400054340.v4.03 annot-version=v4.03
Sequence

ATGATTGCTGATAGATATCCTGATTCGAAAAAGACATGGATTGGTGCTGTATATCCAGAT
TTCAAGCAACTAAGTGTTGGTGACAGATACATAACCTCATTGTATTGGTCTATTGTAACG
CTGACAACAACCGGTTATGGAGACTTGCATGCTGAGAACTCAAGAGAGATGCTGTTTGAT
ATCTTTTACATGTTATTCAACTTGGGATTGACATCTTACATAATTGGAAACATGACTAAC
CTTGTTGTTCATTGGACTAGTCGCACCAGAAACTTCAGGGAGGCAGTGAAAGCAGCTCAA
GAATTCGCGAAAAGGAATCAGTTGCCTCCAAGAGTACAAGATCAGGTTTTGTCTCACATG
TGTCTCAAGTTCAAAACAGAAACATTAAAACAAGAAGAGACTCTTAATGGCCTGCCTAAA
GCCATCAGAACAAGCATTGCACACCATCTGTTTTTTCCTATAGTTCAAAATGTTCATTTG
TTCCAAGGTGTTTCGCGGAACCTCCTTTTCCAACTGGTTCCTGAAATGGAAGCTGAATAC
TTCCCTCCGAAGCAAGAAGTAATTTTGCAGAATGAGGCACCAACTGATCTGTATATAATA
GTTTCAGGAGCAGTGGAATTTATAGCACAGATTGAAGGGCTAGAGCAAATAATTGGAAAG
GCTGTTGCAGGAGAAATATTTGGAGACATAGGTGTTTTATGTGGGAGACCACAGCCATTT
GCTGTTCGAACTACCGAGATTTCTCAGATTCTAAGGCTAAGTAGGACATCATTGATGAAC
ATTCTTCGCGCAAATCCAGAAGATGAATGTATAATTATGAACAATCTTTTGATGAAACTT
CAGGGATTTGGAGGATTTGGTTATGTGGACCACCAAACAAATGCAGGACCAGAAATCAAA
AGGCATGATGATATCACACTTACTAGCATAGATATCAATAATTTGGAAGCTAGAGTTAAG
AAGCAAGAGAGAGATGATGGACAAGAAGTAAACAAAACCATGAATGATTTGTCATTAAAT
CTTGAAAATAAGAGTGAGTTAAGTGAGCATAAAGTGGAGCTCATTGGACCAGATGAGGGA
ACAAAGAGCTGTCAACTGAAGCCTGAGGTCCCCAGTTGTTCCAACTCTTGCCTAAAAAGA
CCCACATGTAGTACCAGTTCAAGTGGCTCTCAAGGGACAAAATCTACCCACCATAAGAAG
AGAATCACCATTCACGTGAAAAAAGAATCATTGCATCAACAGTTTGGGAAACTAATCATT
CTACCGGATTCACTACAAGAGCTATTCAGAGTAGCAGGTCAAAGATTTGGAAGCTACGAT
TTCAAGAGAGCTGTAAATGCAGAGGATGCTGAAATAGATGACATTGATGTCATCAGAGAT
GGCGACCATCTGTTTTTCCTTTAA