Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054306
CDS Infomation

pacid=37463013 polypeptide=PGSC0003DMP400036530 locus=PGSC0003DMG400021072 ID=PGSC0003DMT400054306.v4.03 annot-version=v4.03
Sequence

ATGTCTATTCTATCCTTGCATTCTCTCATTTTCAACGTTAAAACCACTGCTAAATCCTAC
TGTTTCACTTCATTTCTTCCTTCTTCTTCAATCTCAAGCTCTAAATTTAGAAAGCTTTCA
CAATTTTCAACTCATTCATCATTTGATGATTCTCGAGATTTTTTTGTACCAAAACCCAAG
CAAAACGACGATGATTCTGATGATAAACCATTCTCATTTGTTGATGAATGGGGCGAGAGG
TCGAAACCGCAGCTCCGACCCATGACGAAGTTATCGGAATCGGATCCTCCTATTGACGTA
GACGAATGGGGTAGAGCTGAGCTAGGGATCAACAACTCTTCAGGGATTGAAGATGAGTGG
GGCGAGAAGTCGTTTCCGGAGCTCCGACCCACGAAAACGGTATCGGATTCGGATCCTCCT
ATTGACGAAGACGAATGGATCGGTGCTAAGCTAACAGGCAACAACAACATTGATAGAGTT
AGTAATCAGGGTGTTTTGGAACCCGAAACGATGGAGGAAGATGGATGGGACGAAGCTGAG
GTAGTGGGGAGAATCAATGCAGGTGTTGAAGAAGACGAGAGAATTGCAGAGATGAAAAGG
TGCTTAATTGACACGGTTTATGGGACAGATTTTGGGCTCAGGGCCTCATCCGAAGTTCGA
GCTGAGGCTCTGGAGCTGGTTGCTAAGTTGGAGGCAGCAAATCCAACTCCAAATCCAGTT
GAATTGCTTGACGGGAACTGGATTTTAGTGTTTACTGCATTTTCTGAGTTGTTACCTCTT
CTGGCTGTGGGCACCATTCCTTTGTTGAAGGTCGAAAAGATTAGTCAAACAATTAGTATG
AGCAGCCTTACCATAGAGAACTCAACTACATTGTCAAGCCCTGTAGCCACCTCGTCTTTC
AGTGCAACTGCTGTCTTTGAAGTTCAGAGTCCATCAAGAATACAGGTACCTTTTTTGGAC
TGCACTGTAAGTTCTTCAGAGAGGTACTATAGTGTCCTATGCGAAGAGATATATGATCAA
AACTGCTTACTACAGTCAAATAAGATAATAGTCGTGGTGATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036530
PEP Infomation

pacid=37463013 transcript=PGSC0003DMT400054306 locus=PGSC0003DMG400021072 ID=PGSC0003DMT400054306.v4.03 annot-version=v4.03
Sequence

MSILSLHSLIFNVKTTAKSYCFTSFLPSSSISSSKFRKLSQFSTHSSFDDSRDFFVPKPK
QNDDDSDDKPFSFVDEWGERSKPQLRPMTKLSESDPPIDVDEWGRAELGINNSSGIEDEW
GEKSFPELRPTKTVSDSDPPIDEDEWIGAKLTGNNNIDRVSNQGVLEPETMEEDGWDEAE
VVGRINAGVEEDERIAEMKRCLIDTVYGTDFGLRASSEVRAEALELVAKLEAANPTPNPV
ELLDGNWILVFTAFSELLPLLAVGTIPLLKVEKISQTISMSSLTIENSTTLSSPVATSSF
SATAVFEVQSPSRIQVPFLDCTVSSSERYYSVLCEEIYDQNCLLQSNKIIVVVM*

Transcript Sequence

Transcript ID

PGSC0003DMT400054306
Transcript Infomation

pacid=37463013 locus=PGSC0003DMG400021072 ID=PGSC0003DMT400054306.v4.03 annot-version=v4.03
Sequence

ATGTCTATTCTATCCTTGCATTCTCTCATTTTCAACGTTAAAACCACTGCTAAATCCTAC
TGTTTCACTTCATTTCTTCCTTCTTCTTCAATCTCAAGCTCTAAATTTAGAAAGCTTTCA
CAATTTTCAACTCATTCATCATTTGATGATTCTCGAGATTTTTTTGTACCAAAACCCAAG
CAAAACGACGATGATTCTGATGATAAACCATTCTCATTTGTTGATGAATGGGGCGAGAGG
TCGAAACCGCAGCTCCGACCCATGACGAAGTTATCGGAATCGGATCCTCCTATTGACGTA
GACGAATGGGGTAGAGCTGAGCTAGGGATCAACAACTCTTCAGGGATTGAAGATGAGTGG
GGCGAGAAGTCGTTTCCGGAGCTCCGACCCACGAAAACGGTATCGGATTCGGATCCTCCT
ATTGACGAAGACGAATGGATCGGTGCTAAGCTAACAGGCAACAACAACATTGATAGAGTT
AGTAATCAGGGTGTTTTGGAACCCGAAACGATGGAGGAAGATGGATGGGACGAAGCTGAG
GTAGTGGGGAGAATCAATGCAGGTGTTGAAGAAGACGAGAGAATTGCAGAGATGAAAAGG
TGCTTAATTGACACGGTTTATGGGACAGATTTTGGGCTCAGGGCCTCATCCGAAGTTCGA
GCTGAGGCTCTGGAGCTGGTTGCTAAGTTGGAGGCAGCAAATCCAACTCCAAATCCAGTT
GAATTGCTTGACGGGAACTGGATTTTAGTGTTTACTGCATTTTCTGAGTTGTTACCTCTT
CTGGCTGTGGGCACCATTCCTTTGTTGAAGGTCGAAAAGATTAGTCAAACAATTAGTATG
AGCAGCCTTACCATAGAGAACTCAACTACATTGTCAAGCCCTGTAGCCACCTCGTCTTTC
AGTGCAACTGCTGTCTTTGAAGTTCAGAGTCCATCAAGAATACAGGTACCTTTTTTGGAC
TGCACTGTAAGTTCTTCAGAGAGGTACTATAGTGTCCTATGCGAAGAGATATATGATCAA
AACTGCTTACTACAGTCAAATAAGATAATAGTCGTGGTGATGTGA