Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054258
CDS Infomation

pacid=37452751 polypeptide=PGSC0003DMP400036508 locus=PGSC0003DMG400021048 ID=PGSC0003DMT400054258.v4.03 annot-version=v4.03
Sequence

ATGGTTGAGACGCAAGGGGGTGGTGGAGATGGAGGTGTCCAATTTGTGTTACATGTGCTT
CGAGGACGATGGTTCTCACTTTTTGCCTCGTTCCTTATTATGTCTGGAGCAGGGGCTACT
TACCTTTTCGGGGTATACTCCCAGGAAATAAAAAACACTCTTGGATATGATCAGACAACA
CTTGTTCTCTTGGGTTTCTTCAAGGATTTGGGAGCTAACGTTGGAGTTCTCTCTGGTCTA
ATAGCGGAGGTAAGTCCAACATGGTTCGTGCTGCTAGTTGGTGCGGCTATGAACTTTACA
GGCTACTTTATGATATGGCTTTCTGTTATTGGCAAGATTTCCAAGCCAAAAGTTTGGCAA
ATGTGCATATACATATGCCTTGGAGCCAATTCTCAGAATTTTGCAAATACAGGAGCTCTT
GTAACCTCTGTTAGGAACTTCCCTGAGAGTAGAGGTAACATGATAGGTCTTTTAAAAGGA
TTTACAGGGCTAAGTGGAGCTATAATGACACAACTATATTTGGCTGTCTATGGAAATGAT
GCTCAATCTCTTATCCTCCTTATTGCCTGGATGCCAGCTGCATTATCACTCATTTTTGTT
TATACCATTCGACAAATGAAAGTCGTTAGGCAACCAAATCAGCAAACTGTTTTTTTCCAC
TGCTTGTTAATATCAATTGTCCTCGCATTGTTTCTTATGGTCACCACACTTCTCGAGAAA
GCAATATCGTTTTCTCATGCTGCATATGTTGTAGCCGCCACTGTCTCTTGTGCTTTACTT
TTCTCCCCTCTTTTAGTTTTCATTAGAGAGGAGTTAGCTATCTGGCGTCAAATGAAACAG
AATAACGGAGGAGTTGCAAACACAATCGTGGAAAATCCACCACCAACCGAAATCCCACAG
CCACAAAAAGATCAAGTCAACTCTAAGACGTCAACATCTTCATGTTTTTCAAAAATATTC
TTCGAAAAACCAGCAAGAGGCGAAGATTATACCATCTTACAAGCACTTCTAAGTACTGAT
ATGTTGATTCTGTTCGTGGCTACATTATGTGGACTTGGATCAAGCCTAACTGCAGTTGAT
AACATGGGTCAGATAGGTGGTTCTTTAGGATATCCAAAAACTACAGTGAAATCCTTCTTG
TCACTTCTCAGCATATGGAATTTTTTCGGCAGAATTTTCTCAGGATTCGTGTCTGAAAGC
CTGCTAGTCAGGTACAAATTTCCTCGGACTCTGATGATGACATTAGTCCTTCTTCTGTCA
TGCATCGGCCTACTTCTAATCGCTTTTCCATTCCCCGGTTCACTATATGTGGCGTCTATA
ATTATCGGTTTCTCATTTGGTGCTCAATTGCCATTACTTTTCACAATCATTTCTGAGCTG
TTTGGGTTAAAGTACTATTCAACATTGTTCAATTGTGGACAATTGGCTAGCCCTCTTGGC
TCATACATTCTGAATGTGAAAGTTACTGGACCACTTTGTGATAGAGAGGCATTGAAGGAT
CTTGAGAAAAAAGGTTTGACTAGAGCATCTGTCAAGGAGCTAACGTGTATTGGTAACCAA
TGTTATCAACTACCTTTCATTATCCTGGCTTGTGTCACATTCTTTGGAGCTATGGCCTCA
TTGATTTTGGTTGCAAGAACTAGACAGTTTTACAAAGGAGATATATACAAGAAGTTTAAA
GAACAACCAAATACACCTGATACAGAAATGGCTTCTTCAAACACTACTAATAAGACAATC
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400036508
PEP Infomation

pacid=37452751 transcript=PGSC0003DMT400054258 locus=PGSC0003DMG400021048 ID=PGSC0003DMT400054258.v4.03 annot-version=v4.03
Sequence

MVETQGGGGDGGVQFVLHVLRGRWFSLFASFLIMSGAGATYLFGVYSQEIKNTLGYDQTT
LVLLGFFKDLGANVGVLSGLIAEVSPTWFVLLVGAAMNFTGYFMIWLSVIGKISKPKVWQ
MCIYICLGANSQNFANTGALVTSVRNFPESRGNMIGLLKGFTGLSGAIMTQLYLAVYGND
AQSLILLIAWMPAALSLIFVYTIRQMKVVRQPNQQTVFFHCLLISIVLALFLMVTTLLEK
AISFSHAAYVVAATVSCALLFSPLLVFIREELAIWRQMKQNNGGVANTIVENPPPTEIPQ
PQKDQVNSKTSTSSCFSKIFFEKPARGEDYTILQALLSTDMLILFVATLCGLGSSLTAVD
NMGQIGGSLGYPKTTVKSFLSLLSIWNFFGRIFSGFVSESLLVRYKFPRTLMMTLVLLLS
CIGLLLIAFPFPGSLYVASIIIGFSFGAQLPLLFTIISELFGLKYYSTLFNCGQLASPLG
SYILNVKVTGPLCDREALKDLEKKGLTRASVKELTCIGNQCYQLPFIILACVTFFGAMAS
LILVARTRQFYKGDIYKKFKEQPNTPDTEMASSNTTNKTI*

Transcript Sequence

Transcript ID

PGSC0003DMT400054258
Transcript Infomation

pacid=37452751 locus=PGSC0003DMG400021048 ID=PGSC0003DMT400054258.v4.03 annot-version=v4.03
Sequence

ATGGTTGAGACGCAAGGGGGTGGTGGAGATGGAGGTGTCCAATTTGTGTTACATGTGCTT
CGAGGACGATGGTTCTCACTTTTTGCCTCGTTCCTTATTATGTCTGGAGCAGGGGCTACT
TACCTTTTCGGGGTATACTCCCAGGAAATAAAAAACACTCTTGGATATGATCAGACAACA
CTTGTTCTCTTGGGTTTCTTCAAGGATTTGGGAGCTAACGTTGGAGTTCTCTCTGGTCTA
ATAGCGGAGGTAAGTCCAACATGGTTCGTGCTGCTAGTTGGTGCGGCTATGAACTTTACA
GGCTACTTTATGATATGGCTTTCTGTTATTGGCAAGATTTCCAAGCCAAAAGTTTGGCAA
ATGTGCATATACATATGCCTTGGAGCCAATTCTCAGAATTTTGCAAATACAGGAGCTCTT
GTAACCTCTGTTAGGAACTTCCCTGAGAGTAGAGGTAACATGATAGGTCTTTTAAAAGGA
TTTACAGGGCTAAGTGGAGCTATAATGACACAACTATATTTGGCTGTCTATGGAAATGAT
GCTCAATCTCTTATCCTCCTTATTGCCTGGATGCCAGCTGCATTATCACTCATTTTTGTT
TATACCATTCGACAAATGAAAGTCGTTAGGCAACCAAATCAGCAAACTGTTTTTTTCCAC
TGCTTGTTAATATCAATTGTCCTCGCATTGTTTCTTATGGTCACCACACTTCTCGAGAAA
GCAATATCGTTTTCTCATGCTGCATATGTTGTAGCCGCCACTGTCTCTTGTGCTTTACTT
TTCTCCCCTCTTTTAGTTTTCATTAGAGAGGAGTTAGCTATCTGGCGTCAAATGAAACAG
AATAACGGAGGAGTTGCAAACACAATCGTGGAAAATCCACCACCAACCGAAATCCCACAG
CCACAAAAAGATCAAGTCAACTCTAAGACGTCAACATCTTCATGTTTTTCAAAAATATTC
TTCGAAAAACCAGCAAGAGGCGAAGATTATACCATCTTACAAGCACTTCTAAGTACTGAT
ATGTTGATTCTGTTCGTGGCTACATTATGTGGACTTGGATCAAGCCTAACTGCAGTTGAT
AACATGGGTCAGATAGGTGGTTCTTTAGGATATCCAAAAACTACAGTGAAATCCTTCTTG
TCACTTCTCAGCATATGGAATTTTTTCGGCAGAATTTTCTCAGGATTCGTGTCTGAAAGC
CTGCTAGTCAGGTACAAATTTCCTCGGACTCTGATGATGACATTAGTCCTTCTTCTGTCA
TGCATCGGCCTACTTCTAATCGCTTTTCCATTCCCCGGTTCACTATATGTGGCGTCTATA
ATTATCGGTTTCTCATTTGGTGCTCAATTGCCATTACTTTTCACAATCATTTCTGAGCTG
TTTGGGTTAAAGTACTATTCAACATTGTTCAATTGTGGACAATTGGCTAGCCCTCTTGGC
TCATACATTCTGAATGTGAAAGTTACTGGACCACTTTGTGATAGAGAGGCATTGAAGGAT
CTTGAGAAAAAAGGTTTGACTAGAGCATCTGTCAAGGAGCTAACGTGTATTGGTAACCAA
TGTTATCAACTACCTTTCATTATCCTGGCTTGTGTCACATTCTTTGGAGCTATGGCCTCA
TTGATTTTGGTTGCAAGAACTAGACAGTTTTACAAAGGAGATATATACAAGAAGTTTAAA
GAACAACCAAATACACCTGATACAGAAATGGCTTCTTCAAACACTACTAATAAGACAATC
TGA