Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054187
CDS Infomation

pacid=37462478 polypeptide=PGSC0003DMP400036468 locus=PGSC0003DMG400021015 ID=PGSC0003DMT400054187.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGAAATTTGTTTCTTTACAAAGGATGCTCTCATCATAAAACCTCCCAAGAAA
TCTCCGGCATTGTTAAGGATGATAGTTATAGTGTTTGCAATGGTTTGTGGTGTTTATATC
TGTTCAACCTGTCTTAAACAAACTAACACTGAGACAACAAGAAAACTCTTGAATATTGAA
GTTATAGAAAGGCCTTGTCATGAATATGATACCGATCGATCTCAGATTCCGTACTTGCAT
TATCCTAAACCGAAAACCTTTAGCAGGGCTGAATGTTCCTGTAATCCTGTACGTCTGTTT
GCCGTTCTGTCAGCACAGAGGTCTGGGAGTGGATGGTTTGAGACACTATTAAATAGTCAT
ATTAATATAACCTCCAATGGTGAAATTTTCTCTGTCAAAGAGCGAAGAGAAAATGCTTCC
TCAATCCTGAGGACTTTGGACATGGTTTATAATTTGGATTTGATCACCAGTGCTTCCAAG
AATCACTGTTCAGCTGCGGTTGGCTTCAAATGGATGCTTAATCAGGGGTTGATACAATAT
CACAAGGAAATCGTTGAGTACTTCAACAACAAAGGTGTCTCCGTAATATTTCTTTTTAGA
AGGAATCTGCTGCGCCGTATGGTTTCAGTGCTTGCGAATTCCTATGATCGTTATGCTAGA
CTCTTGAATGGAACACACAAGTCTCATGTGCACTCAACTGAGGAGGCTTCCACTCTTGCA
AAGTATAAACCAGAAATCAATACAACATTATTAATTACAGATTTGAAGAGAATGGAGGCG
TCAACCAAGGAGGCATTGGATTACTTCAACAGTACTCGGAGCATAATTTTGTATTATGAA
GATCTTATCAAAGACCACACGAAATTAGAAGACGTTATAGAGTTTTTAAGATTGCCACAA
ATGAATTTAACTAGCCGCCAAGTTAAGATACACAGCGGACCACTGCAGGAACATATCAAG
AACTGGGATGATGTGAATAAGACATTAAAAGGAACAGCTTATGAGAGTTTCCTCCGATCT
GACTATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036468
PEP Infomation

pacid=37462478 transcript=PGSC0003DMT400054187 locus=PGSC0003DMG400021015 ID=PGSC0003DMT400054187.v4.03 annot-version=v4.03
Sequence

MAEEICFFTKDALIIKPPKKSPALLRMIVIVFAMVCGVYICSTCLKQTNTETTRKLLNIE
VIERPCHEYDTDRSQIPYLHYPKPKTFSRAECSCNPVRLFAVLSAQRSGSGWFETLLNSH
INITSNGEIFSVKERRENASSILRTLDMVYNLDLITSASKNHCSAAVGFKWMLNQGLIQY
HKEIVEYFNNKGVSVIFLFRRNLLRRMVSVLANSYDRYARLLNGTHKSHVHSTEEASTLA
KYKPEINTTLLITDLKRMEASTKEALDYFNSTRSIILYYEDLIKDHTKLEDVIEFLRLPQ
MNLTSRQVKIHSGPLQEHIKNWDDVNKTLKGTAYESFLRSDY*

Transcript Sequence

Transcript ID

PGSC0003DMT400054187
Transcript Infomation

pacid=37462478 locus=PGSC0003DMG400021015 ID=PGSC0003DMT400054187.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGAAATTTGTTTCTTTACAAAGGATGCTCTCATCATAAAACCTCCCAAGAAA
TCTCCGGCATTGTTAAGGATGATAGTTATAGTGTTTGCAATGGTTTGTGGTGTTTATATC
TGTTCAACCTGTCTTAAACAAACTAACACTGAGACAACAAGAAAACTCTTGAATATTGAA
GTTATAGAAAGGCCTTGTCATGAATATGATACCGATCGATCTCAGATTCCGTACTTGCAT
TATCCTAAACCGAAAACCTTTAGCAGGGCTGAATGTTCCTGTAATCCTGTACGTCTGTTT
GCCGTTCTGTCAGCACAGAGGTCTGGGAGTGGATGGTTTGAGACACTATTAAATAGTCAT
ATTAATATAACCTCCAATGGTGAAATTTTCTCTGTCAAAGAGCGAAGAGAAAATGCTTCC
TCAATCCTGAGGACTTTGGACATGGTTTATAATTTGGATTTGATCACCAGTGCTTCCAAG
AATCACTGTTCAGCTGCGGTTGGCTTCAAATGGATGCTTAATCAGGGGTTGATACAATAT
CACAAGGAAATCGTTGAGTACTTCAACAACAAAGGTGTCTCCGTAATATTTCTTTTTAGA
AGGAATCTGCTGCGCCGTATGGTTTCAGTGCTTGCGAATTCCTATGATCGTTATGCTAGA
CTCTTGAATGGAACACACAAGTCTCATGTGCACTCAACTGAGGAGGCTTCCACTCTTGCA
AAGTATAAACCAGAAATCAATACAACATTATTAATTACAGATTTGAAGAGAATGGAGGCG
TCAACCAAGGAGGCATTGGATTACTTCAACAGTACTCGGAGCATAATTTTGTATTATGAA
GATCTTATCAAAGACCACACGAAATTAGAAGACGTTATAGAGTTTTTAAGATTGCCACAA
ATGAATTTAACTAGCCGCCAAGTTAAGATACACAGCGGACCACTGCAGGAACATATCAAG
AACTGGGATGATGTGAATAAGACATTAAAAGGAACAGCTTATGAGAGTTTCCTCCGATCT
GACTATTAA