Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054180
CDS Infomation

pacid=37427261 polypeptide=PGSC0003DMP400036465 locus=PGSC0003DMG400021011 ID=PGSC0003DMT400054180.v4.03 annot-version=v4.03
Sequence

ATGCCTTTTCCATGGAAGAAGGTGAAGAAAACAAGCATTTCACAATTGGTGAAGGACCAT
GTAAATTCTCAAAATGGATCTCATCTTATGGTGGAAACCGGTTTTCCAACTTCTCTTGTC
GATCTTGTTGTCAAGAATCGCCGAAGATTCAAGAAATCCTCCAAGAAAAAAATGGCCGAC
GACCCTTTGTTCGATACATCCCCTTCCCCTCCCCATCCCCCTTCGTCTGTAACTTTACCT
TCCACTTCTCAATTCATGATTGATGATAATGAAGTTCCTCCTCTGATCCGTGTAGCTGAA
GTGGAAGGTGACAAACCTGAATCTTGCAAGATGAACAACGAGAAAGAGTGGGGTAATGGT
TGTCTCAGTATGAATCAGGGGATGGTGGCCGTTTTGAAGATGTTTCTCGTGGCGGGTTTG
GTTTTAGGGATGAATAATCTTGTCATGGGGGTAACCATGTCAGCCTTCTTGTTGTTTTTA
TTGGAATATTTAGGAGAACGTTTGTATGGCTTCTTTTCTGGACTACAGAGGAGGGTTAGG
TTGATGATACAAGGGATAAGGGACATCTTTAGAGCCAAAGTGGTTGAAGAAGACAAAGAC
GATTGTGTTTTTAAGGCACCTTTGGAGCTGTCAAAGGATGGTTGCTCTGACTTTGGATGT
CAAATTCAAGAAATTGAGGTTGCACAGGTTGAGGATAGTCAATGTATTAGGGATGGAAAA
GCGAAATGTGTAGGGGTAGATGTAATGGAGAAAGGAGAGGAATCTAGATATGATTTATGT
GAATCCAAAGAAAAGAAATCTCATCGGGCAAAGATGAAATCGAAAATGAAGAAACTTGTT
CCGAAGAAGTTCAGAAAGAAAAAAGGTTCAGCATTGGAGCGTCCTATGCTCCTGGATGAG
ATAGATTATGTTATTGAAGGAAAGACGGAAACTGAAGGTTCCAGTGAACAAAAAATGCAA
TCCAATGGTATAGTGTCATCAGTGGCAAGTAGCATAGATGATAAGACAGATATTGTTGAG
GTTGTTGGTAGTGCTGGAGAATCATCTGAAGTATTTACTGATGCTAGTGTTGAAGAATCA
TTTAATGGTACTGATGACAAGGCAACCATTGTTGGGGAAGAAGAATTGGCTGGAAGAGAG
CATCGCTCTATGTATATTGCTCTCCTTTTGGTTGTTCTAGTCGGCCTTATTGGAGGTCGG
GTTCTTGCACTTGTTTTTACTTTAACATGTTGCTTGATGTTGAAGCGAGGTGAAGGAATA
GGAAGATTCACAAAATTGCCCGTGATCAGGTGTTTCACAAAAAAGTTCAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036465
PEP Infomation

pacid=37427261 transcript=PGSC0003DMT400054180 locus=PGSC0003DMG400021011 ID=PGSC0003DMT400054180.v4.03 annot-version=v4.03
Sequence

MPFPWKKVKKTSISQLVKDHVNSQNGSHLMVETGFPTSLVDLVVKNRRRFKKSSKKKMAD
DPLFDTSPSPPHPPSSVTLPSTSQFMIDDNEVPPLIRVAEVEGDKPESCKMNNEKEWGNG
CLSMNQGMVAVLKMFLVAGLVLGMNNLVMGVTMSAFLLFLLEYLGERLYGFFSGLQRRVR
LMIQGIRDIFRAKVVEEDKDDCVFKAPLELSKDGCSDFGCQIQEIEVAQVEDSQCIRDGK
AKCVGVDVMEKGEESRYDLCESKEKKSHRAKMKSKMKKLVPKKFRKKKGSALERPMLLDE
IDYVIEGKTETEGSSEQKMQSNGIVSSVASSIDDKTDIVEVVGSAGESSEVFTDASVEES
FNGTDDKATIVGEEELAGREHRSMYIALLLVVLVGLIGGRVLALVFTLTCCLMLKRGEGI
GRFTKLPVIRCFTKKFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400054180
Transcript Infomation

pacid=37427261 locus=PGSC0003DMG400021011 ID=PGSC0003DMT400054180.v4.03 annot-version=v4.03
Sequence

ATGCCTTTTCCATGGAAGAAGGTGAAGAAAACAAGCATTTCACAATTGGTGAAGGACCAT
GTAAATTCTCAAAATGGATCTCATCTTATGGTGGAAACCGGTTTTCCAACTTCTCTTGTC
GATCTTGTTGTCAAGAATCGCCGAAGATTCAAGAAATCCTCCAAGAAAAAAATGGCCGAC
GACCCTTTGTTCGATACATCCCCTTCCCCTCCCCATCCCCCTTCGTCTGTAACTTTACCT
TCCACTTCTCAATTCATGATTGATGATAATGAAGTTCCTCCTCTGATCCGTGTAGCTGAA
GTGGAAGGTGACAAACCTGAATCTTGCAAGATGAACAACGAGAAAGAGTGGGGTAATGGT
TGTCTCAGTATGAATCAGGGGATGGTGGCCGTTTTGAAGATGTTTCTCGTGGCGGGTTTG
GTTTTAGGGATGAATAATCTTGTCATGGGGGTAACCATGTCAGCCTTCTTGTTGTTTTTA
TTGGAATATTTAGGAGAACGTTTGTATGGCTTCTTTTCTGGACTACAGAGGAGGGTTAGG
TTGATGATACAAGGGATAAGGGACATCTTTAGAGCCAAAGTGGTTGAAGAAGACAAAGAC
GATTGTGTTTTTAAGGCACCTTTGGAGCTGTCAAAGGATGGTTGCTCTGACTTTGGATGT
CAAATTCAAGAAATTGAGGTTGCACAGGTTGAGGATAGTCAATGTATTAGGGATGGAAAA
GCGAAATGTGTAGGGGTAGATGTAATGGAGAAAGGAGAGGAATCTAGATATGATTTATGT
GAATCCAAAGAAAAGAAATCTCATCGGGCAAAGATGAAATCGAAAATGAAGAAACTTGTT
CCGAAGAAGTTCAGAAAGAAAAAAGGTTCAGCATTGGAGCGTCCTATGCTCCTGGATGAG
ATAGATTATGTTATTGAAGGAAAGACGGAAACTGAAGGTTCCAGTGAACAAAAAATGCAA
TCCAATGGTATAGTGTCATCAGTGGCAAGTAGCATAGATGATAAGACAGATATTGTTGAG
GTTGTTGGTAGTGCTGGAGAATCATCTGAAGTATTTACTGATGCTAGTGTTGAAGAATCA
TTTAATGGTACTGATGACAAGGCAACCATTGTTGGGGAAGAAGAATTGGCTGGAAGAGAG
CATCGCTCTATGTATATTGCTCTCCTTTTGGTTGTTCTAGTCGGCCTTATTGGAGGTCGG
GTTCTTGCACTTGTTTTTACTTTAACATGTTGCTTGATGTTGAAGCGAGGTGAAGGAATA
GGAAGATTCACAAAATTGCCCGTGATCAGGTGTTTCACAAAAAAGTTCAGTTAG