Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054145
CDS Infomation

pacid=37468864 polypeptide=PGSC0003DMP400036451 locus=PGSC0003DMG400020999 ID=PGSC0003DMT400054145.v4.03 annot-version=v4.03
Sequence

ATGGGTGGACGTGAACTATTTGGTGGCCATGATGACTCAAAGAAAGTTAAAGGAACTGTG
GTGATGATGAAGAAAAATGCTCTAGATTTTACTGATCTTGCTGGTTCTGTGACTGATAAA
ATCTTTGAGGCCTTTGGCCAAAAGGTTTCTTTTCAATTAATTAGCTCTGTTCAAGGTGAT
CCTAGAAATGGTTTACAAGGGAAGCACAGCAATCCAGCCTACTTGGAGAACTCTCTCTTT
ACTCTAACACCATTAACAGCAGGTAGTGAAACAGCCTTTGGTGTCACATTTGATTGGAAT
GAGGAGTTTGGAGTTCCAGGTGCATTTATCATAAAAAATACGCATATCAATGAGTTCTTT
CTCAAGTCACTCACACTTGAAGATGTGCCTAATCATGGCAAGGTCCATTTTGTTTGCAAT
TCTTGGGTTTATCCTTCTTTTAGATACAAGTCAGATCGCATTTTCTTTGCAAATCAGCCA
TATCTCCCAAGTAAAACACCAGAGCTTTTGCGAAAATACAGAGAAAATGAATTGCTAACA
TTAAGAGGAGATGGAACTGGAAAGCGCGAGGCGTGGGATAGGATTTATGACTATGATATC
TACAATGACTTGGGCAATCCGGATCAAGGTCAAGAAAATGTTAGAACTACCTTAGGAGGT
TCTGCTGAATACCCGTATCCTCGGAGAGGAAGAACTGGTAGACCACCAACACGAACAGAT
CCTAAAAGTGAAAGCAGGATTCCTCTTATTCTGAGCTTAGACATCTATGTACCGAGAGAC
GAGCGTTTTGGTCACTTGAAGATGTCAGACTTCCTAACATATGCTTTGAAATCCATTGTT
CAATTCATCCTCCCTGAATTACATGCCCTGTTTGATGGTACCCCTAACGAGTTCGATAGT
TTTGAGGATGTACTTAGACTATATGAAGGAGGGATCAAACTTCCTCAAGGACCTTTATTT
AAGGCTCTCACTGCTGCTATACCTCTGGAGATGATAAAAGAACTCCTTCGAACAGACGGT
GAAGGAATATTGAGATTTCCAACTCCTCTAGTGATTAAAGATAGTAAAACCGCGTGGAGG
ACTGATGAAGAATTCGCAAGAGAAATGCTAGCTGGAGTTAATCCTATCATAATTAGTAGA
CTTCAAGAATTTCCTCCAAAAAGCAAGCTAGATCCCGAAGCATATGGAAATCAAAACAGT
ACAATTACTGCAGAACACATAGAGGATAAGCTGGATGGACTAACGGTTGATGAGGCGATG
AACAATAATAAACTTTTCATATTGAACCATCATGATCTTCTTATACCATATTTGAGGAGG
ATAAACACTACAATAACGAAAACATATGCCTCGAGAACTTTGCTCTTCTTGCAAGATAAT
GGATCTTTGAAGCCACTAGCAATTGAATTGAGTTTGCCACATCCAGATGGAGATCAATTT
GGTGTTACTAGCAAAGTGTATACTCCAAGTGATCAAGGTGTTGAGAGCTCTATCTGGCAA
TTGGCCAAAGCTTATGTTGCGGTGAATGACGCTGGTGTTCATCAACTAATTAGTCATTGG
TTGAATACACATGCGGTGATTGAGCCATTTGTGATTGCAACAAACAGGCAACTAAGTGTG
CTTCACCCTATTCATAAGCTTCTATATCCTCATTTCCGGGACACAATGAATATTAATGCT
TCGGCAAGACAAATCCTAATCAATGCTGGTGGAGTTCTTGAGAGTACAGTTTTTCAATCC
AAATTTGCCCTGGAAATGTCAGCTGTCGTTTACAAAGATTGGGTTTTCCCTGATCAAGCC
CTTCCAGCTGATCTTGTTAAAAGGGGAGTAGCAGTTGAGGACTCGAGTTCTCCTCATGGT
GTTCGTTTACTGATAGAGGACTATCCATACGCTGTTGATGGCTTAGAAATATGGTCTGCA
ATCAAAAGTTGGGTGACAGACTACTGCAGCTTCTACTATGGATCGGACGAAGAGATTCTG
AAAGACAATGAACTCCAAGCCTGGTGGAAGGAACTCCGAGAAGTGGGACATGGTGACAAG
AAAAATGAACCATGGTGGCCTGAAATGGAAACACCACAAGAGCTAATCGATTCGTGTACC
ACCATCATATGGATAGCTTCTGCACTTCATGCAGCAGTTAATTTTGGGCAATATCCTTAT
GCAGGTTACCTCCCAAATCGCCCCACAGTAAGTCGAAGATTCATGCCTGAACCAGGAACT
CCTGAATATGAAGAGCTAAAGAAAAACCCCGATAAGGCATTCTTGAAAACAATCACAGCT
CAGTTACAAACATTGCTTGGTGTTTCCCTCGTAGAGATATTGTCAAGGCATACTACAGAT
GAGATTTACCTCGGACAACGAGAGTCTCCTGAATGGACAAAGGACAAAGAACCACTTGCT
GCTTTCGACAAATTTGGAAAGAAGTTGACAGACATTGAAAAACAGATTATACAGAGGAAT
GGTGACAACATATTGACAAACAGATCAGGCCCCATTAACGCTCCATATACGTTGCTTTTC
CCAACAAGTGAAGGTGGACTTACAGGGAAAGGAATTCCCAACAGTGTGTCAATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400036451
PEP Infomation

pacid=37468864 transcript=PGSC0003DMT400054145 locus=PGSC0003DMG400020999 ID=PGSC0003DMT400054145.v4.03 annot-version=v4.03
Sequence

MGGRELFGGHDDSKKVKGTVVMMKKNALDFTDLAGSVTDKIFEAFGQKVSFQLISSVQGD
PRNGLQGKHSNPAYLENSLFTLTPLTAGSETAFGVTFDWNEEFGVPGAFIIKNTHINEFF
LKSLTLEDVPNHGKVHFVCNSWVYPSFRYKSDRIFFANQPYLPSKTPELLRKYRENELLT
LRGDGTGKREAWDRIYDYDIYNDLGNPDQGQENVRTTLGGSAEYPYPRRGRTGRPPTRTD
PKSESRIPLILSLDIYVPRDERFGHLKMSDFLTYALKSIVQFILPELHALFDGTPNEFDS
FEDVLRLYEGGIKLPQGPLFKALTAAIPLEMIKELLRTDGEGILRFPTPLVIKDSKTAWR
TDEEFAREMLAGVNPIIISRLQEFPPKSKLDPEAYGNQNSTITAEHIEDKLDGLTVDEAM
NNNKLFILNHHDLLIPYLRRINTTITKTYASRTLLFLQDNGSLKPLAIELSLPHPDGDQF
GVTSKVYTPSDQGVESSIWQLAKAYVAVNDAGVHQLISHWLNTHAVIEPFVIATNRQLSV
LHPIHKLLYPHFRDTMNINASARQILINAGGVLESTVFQSKFALEMSAVVYKDWVFPDQA
LPADLVKRGVAVEDSSSPHGVRLLIEDYPYAVDGLEIWSAIKSWVTDYCSFYYGSDEEIL
KDNELQAWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIASALHAAVNFGQYPY
AGYLPNRPTVSRRFMPEPGTPEYEELKKNPDKAFLKTITAQLQTLLGVSLVEILSRHTTD
EIYLGQRESPEWTKDKEPLAAFDKFGKKLTDIEKQIIQRNGDNILTNRSGPINAPYTLLF
PTSEGGLTGKGIPNSVSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400054145
Transcript Infomation

pacid=37468864 locus=PGSC0003DMG400020999 ID=PGSC0003DMT400054145.v4.03 annot-version=v4.03
Sequence

ATGGGTGGACGTGAACTATTTGGTGGCCATGATGACTCAAAGAAAGTTAAAGGAACTGTG
GTGATGATGAAGAAAAATGCTCTAGATTTTACTGATCTTGCTGGTTCTGTGACTGATAAA
ATCTTTGAGGCCTTTGGCCAAAAGGTTTCTTTTCAATTAATTAGCTCTGTTCAAGGTGAT
CCTAGAAATGGTTTACAAGGGAAGCACAGCAATCCAGCCTACTTGGAGAACTCTCTCTTT
ACTCTAACACCATTAACAGCAGGTAGTGAAACAGCCTTTGGTGTCACATTTGATTGGAAT
GAGGAGTTTGGAGTTCCAGGTGCATTTATCATAAAAAATACGCATATCAATGAGTTCTTT
CTCAAGTCACTCACACTTGAAGATGTGCCTAATCATGGCAAGGTCCATTTTGTTTGCAAT
TCTTGGGTTTATCCTTCTTTTAGATACAAGTCAGATCGCATTTTCTTTGCAAATCAGCCA
TATCTCCCAAGTAAAACACCAGAGCTTTTGCGAAAATACAGAGAAAATGAATTGCTAACA
TTAAGAGGAGATGGAACTGGAAAGCGCGAGGCGTGGGATAGGATTTATGACTATGATATC
TACAATGACTTGGGCAATCCGGATCAAGGTCAAGAAAATGTTAGAACTACCTTAGGAGGT
TCTGCTGAATACCCGTATCCTCGGAGAGGAAGAACTGGTAGACCACCAACACGAACAGAT
CCTAAAAGTGAAAGCAGGATTCCTCTTATTCTGAGCTTAGACATCTATGTACCGAGAGAC
GAGCGTTTTGGTCACTTGAAGATGTCAGACTTCCTAACATATGCTTTGAAATCCATTGTT
CAATTCATCCTCCCTGAATTACATGCCCTGTTTGATGGTACCCCTAACGAGTTCGATAGT
TTTGAGGATGTACTTAGACTATATGAAGGAGGGATCAAACTTCCTCAAGGACCTTTATTT
AAGGCTCTCACTGCTGCTATACCTCTGGAGATGATAAAAGAACTCCTTCGAACAGACGGT
GAAGGAATATTGAGATTTCCAACTCCTCTAGTGATTAAAGATAGTAAAACCGCGTGGAGG
ACTGATGAAGAATTCGCAAGAGAAATGCTAGCTGGAGTTAATCCTATCATAATTAGTAGA
CTTCAAGAATTTCCTCCAAAAAGCAAGCTAGATCCCGAAGCATATGGAAATCAAAACAGT
ACAATTACTGCAGAACACATAGAGGATAAGCTGGATGGACTAACGGTTGATGAGGCGATG
AACAATAATAAACTTTTCATATTGAACCATCATGATCTTCTTATACCATATTTGAGGAGG
ATAAACACTACAATAACGAAAACATATGCCTCGAGAACTTTGCTCTTCTTGCAAGATAAT
GGATCTTTGAAGCCACTAGCAATTGAATTGAGTTTGCCACATCCAGATGGAGATCAATTT
GGTGTTACTAGCAAAGTGTATACTCCAAGTGATCAAGGTGTTGAGAGCTCTATCTGGCAA
TTGGCCAAAGCTTATGTTGCGGTGAATGACGCTGGTGTTCATCAACTAATTAGTCATTGG
TTGAATACACATGCGGTGATTGAGCCATTTGTGATTGCAACAAACAGGCAACTAAGTGTG
CTTCACCCTATTCATAAGCTTCTATATCCTCATTTCCGGGACACAATGAATATTAATGCT
TCGGCAAGACAAATCCTAATCAATGCTGGTGGAGTTCTTGAGAGTACAGTTTTTCAATCC
AAATTTGCCCTGGAAATGTCAGCTGTCGTTTACAAAGATTGGGTTTTCCCTGATCAAGCC
CTTCCAGCTGATCTTGTTAAAAGGGGAGTAGCAGTTGAGGACTCGAGTTCTCCTCATGGT
GTTCGTTTACTGATAGAGGACTATCCATACGCTGTTGATGGCTTAGAAATATGGTCTGCA
ATCAAAAGTTGGGTGACAGACTACTGCAGCTTCTACTATGGATCGGACGAAGAGATTCTG
AAAGACAATGAACTCCAAGCCTGGTGGAAGGAACTCCGAGAAGTGGGACATGGTGACAAG
AAAAATGAACCATGGTGGCCTGAAATGGAAACACCACAAGAGCTAATCGATTCGTGTACC
ACCATCATATGGATAGCTTCTGCACTTCATGCAGCAGTTAATTTTGGGCAATATCCTTAT
GCAGGTTACCTCCCAAATCGCCCCACAGTAAGTCGAAGATTCATGCCTGAACCAGGAACT
CCTGAATATGAAGAGCTAAAGAAAAACCCCGATAAGGCATTCTTGAAAACAATCACAGCT
CAGTTACAAACATTGCTTGGTGTTTCCCTCGTAGAGATATTGTCAAGGCATACTACAGAT
GAGATTTACCTCGGACAACGAGAGTCTCCTGAATGGACAAAGGACAAAGAACCACTTGCT
GCTTTCGACAAATTTGGAAAGAAGTTGACAGACATTGAAAAACAGATTATACAGAGGAAT
GGTGACAACATATTGACAAACAGATCAGGCCCCATTAACGCTCCATATACGTTGCTTTTC
CCAACAAGTGAAGGTGGACTTACAGGGAAAGGAATTCCCAACAGTGTGTCAATATAG