Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400054066
CDS Infomation

pacid=37455629 polypeptide=PGSC0003DMP400036398 locus=PGSC0003DMG400020968 ID=PGSC0003DMT400054066.v4.03 annot-version=v4.03
Sequence

ATGAGTGACAAAGAATCATCACCAATTATCAATAATTTGGTGGAAATGGATGAAGAAGTA
CTCAAAATTCTTTCTTGGAACAAATCTGATCTATATCAGTGGGAAGGTTTTTGGTGCAGT
CCTTCTATTATGAAGGAAACCATGGACCTCAAGGCAACCTTCAAATCAGTTCCTAATGAT
GTTCTCTTGGCATCTTCCATGAAAACAGGTTCAACATGGCTCAAGGCCATATGTGTATGC
ATCATGCAAGGTAATAAAGAGGAAGAAGAAGATCTTTTGGTTAAGGATAATCCTCATTTT
CATGTTCCAACAATAGAGGCTATGAAGTATTATACAAAAGCTTTAGCTCATGATCTATAC
ACAATACCCTCTCCAAGATTATTTCACACTCATTTACCTTATAGGGTTTTGCCAGATTCA
TTCAAAAATTCAGATAATTGCAAAATTATATACATAACAAGAAATCCTAAGGATACCCTA
ATTTCAATGTGGCATTTCATCAACTATAGTCATAAGCGCTTAGAAAATCCCTCTCCTTTA
GAAGAAGCTGTGGAGTCCTTTTGCAATGGGGTTCATCTTTATGGACCATTTTTTGAACAT
GTTCTTGAATATTGGGAAGAAAGAAAAAAAATGCCTCAAAAAATATTATTTTTAAAGTAT
GAAAACTTGAAAATGGACCCTAAAAAGGAGTTGAAAAAAATAGCCTTGTTTCTTGGAAAA
TCTTTTAGAAATGAAGAGGATTTGGAGATAGTTTTGAACAAGTGTAGCTTGGAAAGGCTT
AAGAACTTGGAGGTTAATAAGAGTGGATCACTCTTCCATGGTGTCCCCAGTAATTCATAT
TTCAGAAAAGGAATTATTGGGGATTGGAAGAATCACATGACACCTAAAATGGAAGAGCGA
CTTGACAAACTTACAAGCTTGAAACTTCAAGGGAGTGGCCTTCAACTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036398
PEP Infomation

pacid=37455629 transcript=PGSC0003DMT400054066 locus=PGSC0003DMG400020968 ID=PGSC0003DMT400054066.v4.03 annot-version=v4.03
Sequence

MSDKESSPIINNLVEMDEEVLKILSWNKSDLYQWEGFWCSPSIMKETMDLKATFKSVPND
VLLASSMKTGSTWLKAICVCIMQGNKEEEEDLLVKDNPHFHVPTIEAMKYYTKALAHDLY
TIPSPRLFHTHLPYRVLPDSFKNSDNCKIIYITRNPKDTLISMWHFINYSHKRLENPSPL
EEAVESFCNGVHLYGPFFEHVLEYWEERKKMPQKILFLKYENLKMDPKKELKKIALFLGK
SFRNEEDLEIVLNKCSLERLKNLEVNKSGSLFHGVPSNSYFRKGIIGDWKNHMTPKMEER
LDKLTSLKLQGSGLQL*

Transcript Sequence

Transcript ID

PGSC0003DMT400054066
Transcript Infomation

pacid=37455629 locus=PGSC0003DMG400020968 ID=PGSC0003DMT400054066.v4.03 annot-version=v4.03
Sequence

ATGAGTGACAAAGAATCATCACCAATTATCAATAATTTGGTGGAAATGGATGAAGAAGTA
CTCAAAATTCTTTCTTGGAACAAATCTGATCTATATCAGTGGGAAGGTTTTTGGTGCAGT
CCTTCTATTATGAAGGAAACCATGGACCTCAAGGCAACCTTCAAATCAGTTCCTAATGAT
GTTCTCTTGGCATCTTCCATGAAAACAGGTTCAACATGGCTCAAGGCCATATGTGTATGC
ATCATGCAAGGTAATAAAGAGGAAGAAGAAGATCTTTTGGTTAAGGATAATCCTCATTTT
CATGTTCCAACAATAGAGGCTATGAAGTATTATACAAAAGCTTTAGCTCATGATCTATAC
ACAATACCCTCTCCAAGATTATTTCACACTCATTTACCTTATAGGGTTTTGCCAGATTCA
TTCAAAAATTCAGATAATTGCAAAATTATATACATAACAAGAAATCCTAAGGATACCCTA
ATTTCAATGTGGCATTTCATCAACTATAGTCATAAGCGCTTAGAAAATCCCTCTCCTTTA
GAAGAAGCTGTGGAGTCCTTTTGCAATGGGGTTCATCTTTATGGACCATTTTTTGAACAT
GTTCTTGAATATTGGGAAGAAAGAAAAAAAATGCCTCAAAAAATATTATTTTTAAAGTAT
GAAAACTTGAAAATGGACCCTAAAAAGGAGTTGAAAAAAATAGCCTTGTTTCTTGGAAAA
TCTTTTAGAAATGAAGAGGATTTGGAGATAGTTTTGAACAAGTGTAGCTTGGAAAGGCTT
AAGAACTTGGAGGTTAATAAGAGTGGATCACTCTTCCATGGTGTCCCCAGTAATTCATAT
TTCAGAAAAGGAATTATTGGGGATTGGAAGAATCACATGACACCTAAAATGGAAGAGCGA
CTTGACAAACTTACAAGCTTGAAACTTCAAGGGAGTGGCCTTCAACTTTGA