Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053866
CDS Infomation

pacid=37430486 polypeptide=PGSC0003DMP400036304 locus=PGSC0003DMG400020901 ID=PGSC0003DMT400053866.v4.03 annot-version=v4.03
Sequence

ATGGCTACTTTGAGGGTACTCATGTTTCCATGGTTGGCTTATGGACACATTTCTCCATTT
CTAAACATAGCCAAGCAACTCGCAGACAGAGGATTCTTGATTTACCTCTGTTCTACGCTA
ATCAATCTCGAATCCATCATCAAGAAAATCCCTGAAAAATACTCTGAATCAATTCGTTTT
GTCGAACTTCACTTACCTGAATTGCCTGAACTTCCTCCTCATTACCATACTACCAATGGT
CTCCCACCCCATCTCAATCACACCCTTCATAAGGCCCTGAAAATGTCCAAACCAAACTTC
TCCAAAATCTTGCAAAATCTGAAACCTGATTTGGTGATTTACGACATATTGCAGCCGTGG
GCTGAACATGTCGTAAATGAACAGAACATTCCAGCAGTCAAGATCCTAACTTCGGGTGCA
GCTCTGTTTTCGTATTTTTTCAACTTTCTAAAGAATCCAGGGGTTGAATTCCCTTTCCCT
GCTATTTATCTCCCGAAAGTTGAGCAAGTAAAGATGAGAGAAATGTTCGAGAAAGAACCT
AATGAAGAGGATCGTCTAGCTGAGGGAAATATGCAAATCATGTTGATGTGTACGTCTAGA
ACTATCGAGGCCAAATACTTAGATTATTGCACTGAATTAAGCAATTGGAAAGTTGTTCCA
GTTGGTCCACCATTCCAAGATCCAATCACTAATGACGTGGACGATATGGAGCTCATTGAT
TGGCTAGGAACAAAAGATGAGAATTCAACTGTTTTTGTCTGCTTTGGAAGTGAGTATTTC
TTGTCAAGAGAAGATATGGAAGAAGTAGCTTTCGGGTTGGAGTTAAGTAATGTTAATTTC
ATATGGGTTGCAAGATTTCCGAAAGGTGAAGAGCAAAATCTTGAAGATGTATTGCCAAAA
GGTTTTCTTGAAAGAATTGGAGAAAGGGGAAGAGTTTTGGACAAATTTGCACCACAACCA
AGAATTCTAAATCATCCGAGTACCGGAGGATTTATAAGTCATTGTGGATGGAATTCAGTA
ATGGAAAGTTTAGATTTTGGGGTTCCTATAATAGCAATGCCTATGCATAATGATCAACCA
ATAAATGCTAAGTTGATAGTTGAATTGGGAGTCGCAATGGAAATTGTTAGAGATGATGAT
GGGAATATTCACAGAGGAGAAATTACGGAAACTCTTAAAGATGTCATAACAGGGGAAACA
GGGGAAATTTTGAGGGGCAAAGTGAGAGATATCAGCAAGAATTTGAAATCTATAAGAGAG
GAAGAGATGAATGCTGCTGCTGAAGAGCTAATTCAACTTTGTAGGAATAGTAATAAGTAC
AAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400036304
PEP Infomation

pacid=37430486 transcript=PGSC0003DMT400053866 locus=PGSC0003DMG400020901 ID=PGSC0003DMT400053866.v4.03 annot-version=v4.03
Sequence

MATLRVLMFPWLAYGHISPFLNIAKQLADRGFLIYLCSTLINLESIIKKIPEKYSESIRF
VELHLPELPELPPHYHTTNGLPPHLNHTLHKALKMSKPNFSKILQNLKPDLVIYDILQPW
AEHVVNEQNIPAVKILTSGAALFSYFFNFLKNPGVEFPFPAIYLPKVEQVKMREMFEKEP
NEEDRLAEGNMQIMLMCTSRTIEAKYLDYCTELSNWKVVPVGPPFQDPITNDVDDMELID
WLGTKDENSTVFVCFGSEYFLSREDMEEVAFGLELSNVNFIWVARFPKGEEQNLEDVLPK
GFLERIGERGRVLDKFAPQPRILNHPSTGGFISHCGWNSVMESLDFGVPIIAMPMHNDQP
INAKLIVELGVAMEIVRDDDGNIHRGEITETLKDVITGETGEILRGKVRDISKNLKSIRE
EEMNAAAEELIQLCRNSNKYK*

Transcript Sequence

Transcript ID

PGSC0003DMT400053866
Transcript Infomation

pacid=37430486 locus=PGSC0003DMG400020901 ID=PGSC0003DMT400053866.v4.03 annot-version=v4.03
Sequence

ATGGCTACTTTGAGGGTACTCATGTTTCCATGGTTGGCTTATGGACACATTTCTCCATTT
CTAAACATAGCCAAGCAACTCGCAGACAGAGGATTCTTGATTTACCTCTGTTCTACGCTA
ATCAATCTCGAATCCATCATCAAGAAAATCCCTGAAAAATACTCTGAATCAATTCGTTTT
GTCGAACTTCACTTACCTGAATTGCCTGAACTTCCTCCTCATTACCATACTACCAATGGT
CTCCCACCCCATCTCAATCACACCCTTCATAAGGCCCTGAAAATGTCCAAACCAAACTTC
TCCAAAATCTTGCAAAATCTGAAACCTGATTTGGTGATTTACGACATATTGCAGCCGTGG
GCTGAACATGTCGTAAATGAACAGAACATTCCAGCAGTCAAGATCCTAACTTCGGGTGCA
GCTCTGTTTTCGTATTTTTTCAACTTTCTAAAGAATCCAGGGGTTGAATTCCCTTTCCCT
GCTATTTATCTCCCGAAAGTTGAGCAAGTAAAGATGAGAGAAATGTTCGAGAAAGAACCT
AATGAAGAGGATCGTCTAGCTGAGGGAAATATGCAAATCATGTTGATGTGTACGTCTAGA
ACTATCGAGGCCAAATACTTAGATTATTGCACTGAATTAAGCAATTGGAAAGTTGTTCCA
GTTGGTCCACCATTCCAAGATCCAATCACTAATGACGTGGACGATATGGAGCTCATTGAT
TGGCTAGGAACAAAAGATGAGAATTCAACTGTTTTTGTCTGCTTTGGAAGTGAGTATTTC
TTGTCAAGAGAAGATATGGAAGAAGTAGCTTTCGGGTTGGAGTTAAGTAATGTTAATTTC
ATATGGGTTGCAAGATTTCCGAAAGGTGAAGAGCAAAATCTTGAAGATGTATTGCCAAAA
GGTTTTCTTGAAAGAATTGGAGAAAGGGGAAGAGTTTTGGACAAATTTGCACCACAACCA
AGAATTCTAAATCATCCGAGTACCGGAGGATTTATAAGTCATTGTGGATGGAATTCAGTA
ATGGAAAGTTTAGATTTTGGGGTTCCTATAATAGCAATGCCTATGCATAATGATCAACCA
ATAAATGCTAAGTTGATAGTTGAATTGGGAGTCGCAATGGAAATTGTTAGAGATGATGAT
GGGAATATTCACAGAGGAGAAATTACGGAAACTCTTAAAGATGTCATAACAGGGGAAACA
GGGGAAATTTTGAGGGGCAAAGTGAGAGATATCAGCAAGAATTTGAAATCTATAAGAGAG
GAAGAGATGAATGCTGCTGCTGAAGAGCTAATTCAACTTTGTAGGAATAGTAATAAGTAC
AAATAA