Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053846
CDS Infomation

pacid=37459605 polypeptide=PGSC0003DMP400036288 locus=PGSC0003DMG400020890 ID=PGSC0003DMT400053846.v4.03 annot-version=v4.03
Sequence

ATGAAAACCTTCAAGTTACTCAAATGTTGGCCCAATGCTGACCCCAATACGTCGACTGTT
GCTGATACTGATACTGATAATGTTCCTTATTTTGATTCTCTTAAGAATTTAATATATGGA
ATCGATTACGTAACTAACCCCGATGAAGATTCCTTCTTCGATTTGGTGTTCACAGGGCCT
GATGGACGCCCTAAAGTAGTCTGTAACTCTAAATCGGTTAAGCAGAGGAAGATCGGTGAA
TTTGATTCTCCAATTGACTCACACTCGAAACCTCATTCTCCGATCAGCGTGCTCGGGTCG
GGTATCAAGTTTCGTGTCTTCTTTTTCGGATTCAGGAAATCAAATCAGGAGAAAGCGGGA
ATTGATGCTTCTTCTATTCCAAATCCGAAGCAGTTAAACAAGACAACTTTGCCCAGAGGC
AGCAGTTTAAGAAGCAAACTGGAGAAAGGGAGGGAGGAGGAATTTTCAGTTGACGACTCG
CCTAAGCAATTTACAAGAGCTGCTGAACTAGCCAAGTTTTTGAAATTGGTGAAGCGTGGA
AATTCCAAAATGTGCACGGATAAAATTAGATTATCAGATCAAGTTTCAACGCCATTGCCA
TCTCCGTTCGTGCAATCAATTAGCTCATCGAGAAAGCAATTGGATGAAAAACAGGGGAAC
CGAGTTGCTGCATTTGGAGCTGTATGTAAGCACGTTATGAAGAGCCGATCGACGACTTCC
TCCTTTGCCGGAGTTTCATCGTCGCTGCCGGCGATGAATCGCAGAGATGATTCACTACTG
GAGCAAAATGACGGAATCCAAAGTGCTATTCTTCACTGCAAGAGATCCTATAGCACTGCA
TCAAAAGATTGTTCGATGTTATTAGCAAGATGTACAACTGAAGATGTAGCACGAACCTCT
TATTATGAAGAAGAGAGCAGATGGAGCATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036288
PEP Infomation

pacid=37459605 transcript=PGSC0003DMT400053846 locus=PGSC0003DMG400020890 ID=PGSC0003DMT400053846.v4.03 annot-version=v4.03
Sequence

MKTFKLLKCWPNADPNTSTVADTDTDNVPYFDSLKNLIYGIDYVTNPDEDSFFDLVFTGP
DGRPKVVCNSKSVKQRKIGEFDSPIDSHSKPHSPISVLGSGIKFRVFFFGFRKSNQEKAG
IDASSIPNPKQLNKTTLPRGSSLRSKLEKGREEEFSVDDSPKQFTRAAELAKFLKLVKRG
NSKMCTDKIRLSDQVSTPLPSPFVQSISSSRKQLDEKQGNRVAAFGAVCKHVMKSRSTTS
SFAGVSSSLPAMNRRDDSLLEQNDGIQSAILHCKRSYSTASKDCSMLLARCTTEDVARTS
YYEEESRWSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400053846
Transcript Infomation

pacid=37459605 locus=PGSC0003DMG400020890 ID=PGSC0003DMT400053846.v4.03 annot-version=v4.03
Sequence

ATGAAAACCTTCAAGTTACTCAAATGTTGGCCCAATGCTGACCCCAATACGTCGACTGTT
GCTGATACTGATACTGATAATGTTCCTTATTTTGATTCTCTTAAGAATTTAATATATGGA
ATCGATTACGTAACTAACCCCGATGAAGATTCCTTCTTCGATTTGGTGTTCACAGGGCCT
GATGGACGCCCTAAAGTAGTCTGTAACTCTAAATCGGTTAAGCAGAGGAAGATCGGTGAA
TTTGATTCTCCAATTGACTCACACTCGAAACCTCATTCTCCGATCAGCGTGCTCGGGTCG
GGTATCAAGTTTCGTGTCTTCTTTTTCGGATTCAGGAAATCAAATCAGGAGAAAGCGGGA
ATTGATGCTTCTTCTATTCCAAATCCGAAGCAGTTAAACAAGACAACTTTGCCCAGAGGC
AGCAGTTTAAGAAGCAAACTGGAGAAAGGGAGGGAGGAGGAATTTTCAGTTGACGACTCG
CCTAAGCAATTTACAAGAGCTGCTGAACTAGCCAAGTTTTTGAAATTGGTGAAGCGTGGA
AATTCCAAAATGTGCACGGATAAAATTAGATTATCAGATCAAGTTTCAACGCCATTGCCA
TCTCCGTTCGTGCAATCAATTAGCTCATCGAGAAAGCAATTGGATGAAAAACAGGGGAAC
CGAGTTGCTGCATTTGGAGCTGTATGTAAGCACGTTATGAAGAGCCGATCGACGACTTCC
TCCTTTGCCGGAGTTTCATCGTCGCTGCCGGCGATGAATCGCAGAGATGATTCACTACTG
GAGCAAAATGACGGAATCCAAAGTGCTATTCTTCACTGCAAGAGATCCTATAGCACTGCA
TCAAAAGATTGTTCGATGTTATTAGCAAGATGTACAACTGAAGATGTAGCACGAACCTCT
TATTATGAAGAAGAGAGCAGATGGAGCATTTGA