Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053843
CDS Infomation

pacid=37459375 polypeptide=PGSC0003DMP400036286 locus=PGSC0003DMG400020888 ID=PGSC0003DMT400053843.v4.03 annot-version=v4.03
Sequence

ATGGAAATTGAATCATCTCCAACATCACCATCTCCTCCACTAAAAACATATAAACTAACA
GCTTCTTCAATAGGCTATTCAAAATCAACCACCATTTCTCCTGCCTTGTTATTTAAGCCT
TGTGAAACACCACCACCAATTAATATCTTGAAAGATATCTCTTTCACTGCTTATCCTTCT
CAGATTCTTGCTATTGTTGGACCGAGTGGCGCGGGAAAATCCACGTTACTCGACATTTTA
GCAGCTGGAACTTCGCCTACAAGTGGCACTCTTCTCTTAAACTCTCTTCCCCTACATAGT
CCTTCTACTTTCCGTAAGCTCTCAGCTTATGTCCCTCAACATGATTGTAGCCTTCCGCAG
CTCACTGTATCGGAAACTTTTGCCTTCTCTGCCCGTCTACTCAACCCGAAACTCAATGAT
GTTTCGTGCATTGTGGATTCTCTTCTGGCTGAGCTCAGGCTTACACATTTGGCTCACACA
AGGCTTGCTCATGGTCTCTCGGGTGGAGAACGAAGGCGTGTTTCGATTGGTTTGAGTCTA
CTCCATGACCCTGCAATCTTACTTCTTGATGAACCAACATCAGGTCTTGATAGTAATTCA
GCTTTAAATGTAATGCAGACACTCAGATCAATAACCGACTCGCGTCAGCGTACCGTGCTG
TTGTCTATTCATCAACCAAGTTTCAAGATTCTTGCCACCATTGATAAAATCCTGTTGCTA
TCAAAAGGAACTGTTGTCCATCATGGTACATTATCATCTCTTGAAGAGTTTTTACTTGAA
AATGGCTTCACTGTCCCCCCACAGCTCAATTCTCTTGAATATGCCATGGAGATGCTCAGC
CAACTCAATGAGAAAAAACCCATTACACCAATAAGTTCACCTCCTAAAAATCCCACCACT
ACCCCTGTTCCTGAGGCTAAAACAGGGGAAATCAAATATAGGAGTTCAAGATTTCATGAA
ATTGCTGTTTTGTACAGCAGATTCTGGAAAATCATTTACAGAACAAAGCAGTTACTTTTA
ACAAACACCTTACAGGCATTAGGAGTTGGTCTTGTTTTAGGTACAATTTACATCAATATT
GGATTTGGTAAAGCTGGAATCGAGAAAAGATTCGGACTTTTCGCTTTCACTCTCACTTTC
CTTCTCTCTTCCACAACTGAAACTCTCCCAATCTTCATAAACGAAAGACCCATTTTACTA
AGAGAAACTTCAAGTGGGGTTTATCGATTATCGTCATATCTCATCGCAAACACACTAGTT
TTCCTCCCTTACTCACTAGTCATCGCAATCTTGTACTCAATTTCACTTTATTTCTTGGTG
GGTCTTTGTTATTCATGGCAAGCATTCACATACTTCATTCTAACAATTTGGGTCATCGTC
TTAATGGCAAACTCATTCGTCCTCTTCTTAAGCTCTGTTGCACCAAATTACATCGCCGGA
ACTTCACTGGTAACTCTACTCCTCGCCGGATCTTTCTTGTTTTCCGGCTACTTCATTACG
AAGGAGACAATGCCTAAGTTCTGGACAATGCTGCATTATTTGTCCATGTACAAGTATGGA
TTAGATGCTTTGTTGATCAATGAGTATTCTTGCCTTGTCGCCAAGTGTTTGATATGGTAC
GATGAGAAAAACAAAGTGTGTATGGTGAGTGGAAGTGATGTGTTGGATAAAAGAGGACTC
CATGAAAGAGAAAGATGGACAAATATATATATCTTGATAGGGTTCTTCCTATTTTATCGA
TTGCTTTGGTTGATTGTATTGATTAGAAGAGTTTCAAGATCAAAGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036286
PEP Infomation

pacid=37459375 transcript=PGSC0003DMT400053843 locus=PGSC0003DMG400020888 ID=PGSC0003DMT400053843.v4.03 annot-version=v4.03
Sequence

MEIESSPTSPSPPLKTYKLTASSIGYSKSTTISPALLFKPCETPPPINILKDISFTAYPS
QILAIVGPSGAGKSTLLDILAAGTSPTSGTLLLNSLPLHSPSTFRKLSAYVPQHDCSLPQ
LTVSETFAFSARLLNPKLNDVSCIVDSLLAELRLTHLAHTRLAHGLSGGERRRVSIGLSL
LHDPAILLLDEPTSGLDSNSALNVMQTLRSITDSRQRTVLLSIHQPSFKILATIDKILLL
SKGTVVHHGTLSSLEEFLLENGFTVPPQLNSLEYAMEMLSQLNEKKPITPISSPPKNPTT
TPVPEAKTGEIKYRSSRFHEIAVLYSRFWKIIYRTKQLLLTNTLQALGVGLVLGTIYINI
GFGKAGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLV
FLPYSLVIAILYSISLYFLVGLCYSWQAFTYFILTIWVIVLMANSFVLFLSSVAPNYIAG
TSLVTLLLAGSFLFSGYFITKETMPKFWTMLHYLSMYKYGLDALLINEYSCLVAKCLIWY
DEKNKVCMVSGSDVLDKRGLHERERWTNIYILIGFFLFYRLLWLIVLIRRVSRSKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400053843
Transcript Infomation

pacid=37459375 locus=PGSC0003DMG400020888 ID=PGSC0003DMT400053843.v4.03 annot-version=v4.03
Sequence

ATGGAAATTGAATCATCTCCAACATCACCATCTCCTCCACTAAAAACATATAAACTAACA
GCTTCTTCAATAGGCTATTCAAAATCAACCACCATTTCTCCTGCCTTGTTATTTAAGCCT
TGTGAAACACCACCACCAATTAATATCTTGAAAGATATCTCTTTCACTGCTTATCCTTCT
CAGATTCTTGCTATTGTTGGACCGAGTGGCGCGGGAAAATCCACGTTACTCGACATTTTA
GCAGCTGGAACTTCGCCTACAAGTGGCACTCTTCTCTTAAACTCTCTTCCCCTACATAGT
CCTTCTACTTTCCGTAAGCTCTCAGCTTATGTCCCTCAACATGATTGTAGCCTTCCGCAG
CTCACTGTATCGGAAACTTTTGCCTTCTCTGCCCGTCTACTCAACCCGAAACTCAATGAT
GTTTCGTGCATTGTGGATTCTCTTCTGGCTGAGCTCAGGCTTACACATTTGGCTCACACA
AGGCTTGCTCATGGTCTCTCGGGTGGAGAACGAAGGCGTGTTTCGATTGGTTTGAGTCTA
CTCCATGACCCTGCAATCTTACTTCTTGATGAACCAACATCAGGTCTTGATAGTAATTCA
GCTTTAAATGTAATGCAGACACTCAGATCAATAACCGACTCGCGTCAGCGTACCGTGCTG
TTGTCTATTCATCAACCAAGTTTCAAGATTCTTGCCACCATTGATAAAATCCTGTTGCTA
TCAAAAGGAACTGTTGTCCATCATGGTACATTATCATCTCTTGAAGAGTTTTTACTTGAA
AATGGCTTCACTGTCCCCCCACAGCTCAATTCTCTTGAATATGCCATGGAGATGCTCAGC
CAACTCAATGAGAAAAAACCCATTACACCAATAAGTTCACCTCCTAAAAATCCCACCACT
ACCCCTGTTCCTGAGGCTAAAACAGGGGAAATCAAATATAGGAGTTCAAGATTTCATGAA
ATTGCTGTTTTGTACAGCAGATTCTGGAAAATCATTTACAGAACAAAGCAGTTACTTTTA
ACAAACACCTTACAGGCATTAGGAGTTGGTCTTGTTTTAGGTACAATTTACATCAATATT
GGATTTGGTAAAGCTGGAATCGAGAAAAGATTCGGACTTTTCGCTTTCACTCTCACTTTC
CTTCTCTCTTCCACAACTGAAACTCTCCCAATCTTCATAAACGAAAGACCCATTTTACTA
AGAGAAACTTCAAGTGGGGTTTATCGATTATCGTCATATCTCATCGCAAACACACTAGTT
TTCCTCCCTTACTCACTAGTCATCGCAATCTTGTACTCAATTTCACTTTATTTCTTGGTG
GGTCTTTGTTATTCATGGCAAGCATTCACATACTTCATTCTAACAATTTGGGTCATCGTC
TTAATGGCAAACTCATTCGTCCTCTTCTTAAGCTCTGTTGCACCAAATTACATCGCCGGA
ACTTCACTGGTAACTCTACTCCTCGCCGGATCTTTCTTGTTTTCCGGCTACTTCATTACG
AAGGAGACAATGCCTAAGTTCTGGACAATGCTGCATTATTTGTCCATGTACAAGTATGGA
TTAGATGCTTTGTTGATCAATGAGTATTCTTGCCTTGTCGCCAAGTGTTTGATATGGTAC
GATGAGAAAAACAAAGTGTGTATGGTGAGTGGAAGTGATGTGTTGGATAAAAGAGGACTC
CATGAAAGAGAAAGATGGACAAATATATATATCTTGATAGGGTTCTTCCTATTTTATCGA
TTGCTTTGGTTGATTGTATTGATTAGAAGAGTTTCAAGATCAAAGAAGTGA