Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053842
CDS Infomation

pacid=37462564 polypeptide=PGSC0003DMP400036285 locus=PGSC0003DMG400020887 ID=PGSC0003DMT400053842.v4.03 annot-version=v4.03
Sequence

ATGGAAACTTTTAACCTACTCAAATTCTGGCGAAGTTCCGGCACTGATACTTCAACTTGC
CGGGATATTGTCTCTGAAATTGATGAATTAGACTACCTACGTAACCCAGCCATTGAAACT
GATGAAGAAACTGACGACGATGCGGATTCCTTCTTTGATTTGGTTTTCACTGGCCCTGAT
GAACGCCCAAAATTGGACAACAACTCCAAATCCGTTTCTGTTAACACTCCCCGTGAACCG
GAATCCCCGAGAGATGTATTTTTCAAACCAATAGCTTTTCCAATTGACTCTATCTCGAAG
CCTCAATCTCCGATTTCTATACTCAAATCGGCCCCTAAATTTCGGGTCTTCTTTTTGGGC
TTAAGGAAAACAAAGCTGGAGAAGGTAGGCATTGACAATTCTTCTCCGTCCGGTACGAAG
TTTCAAACACAGAAACTGGATCTCAAGCGCTTTCCGGTGAAATGCAATGTGGAAGAGGTT
CCCGTTCCTGTGACCCCTGTATTTACCAGAGACAACAGTTTAAGAAGCAAATTGCAGAAC
GAGAAAGAGGAGGAGCTTTCCGTTGACGAATCGTTGAAGAAATTTGTAAGAGCTGATGTG
CCTAAGTACTTAAAATTGATGAAGCCATTGTATGCCAGAGCTTCAAAAAGGTACACAGAC
AAAATCAGTGTATCACCGTTGTCGTCTCCATCGGCACAATCAATGTGCTCACCCAGAAAA
ACATCAGAGGTGAAACGAGTTGCTTCATTCGGATCTGTACGCAAGCACTTAGGGAAAAGT
CGATCGGCGGCATCCACCTTTGCCGCCGGAGCTTCCTCGTCGCCGTTAAATCGCCGTGAC
AATTCACTTCTACAAGAGCAAAATGACGGAATCCAAGGCGCTATATTACATTGCAAGAGA
TGTTACAGCTCACTAGCAAAAAGTAGCGAAAATCTGGCTAGAGCCTCTTCTTCTTCTGTG
GAGCTGAACAGATGGAGCATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400036285
PEP Infomation

pacid=37462564 transcript=PGSC0003DMT400053842 locus=PGSC0003DMG400020887 ID=PGSC0003DMT400053842.v4.03 annot-version=v4.03
Sequence

METFNLLKFWRSSGTDTSTCRDIVSEIDELDYLRNPAIETDEETDDDADSFFDLVFTGPD
ERPKLDNNSKSVSVNTPREPESPRDVFFKPIAFPIDSISKPQSPISILKSAPKFRVFFLG
LRKTKLEKVGIDNSSPSGTKFQTQKLDLKRFPVKCNVEEVPVPVTPVFTRDNSLRSKLQN
EKEEELSVDESLKKFVRADVPKYLKLMKPLYARASKRYTDKISVSPLSSPSAQSMCSPRK
TSEVKRVASFGSVRKHLGKSRSAASTFAAGASSSPLNRRDNSLLQEQNDGIQGAILHCKR
CYSSLAKSSENLARASSSSVELNRWSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400053842
Transcript Infomation

pacid=37462564 locus=PGSC0003DMG400020887 ID=PGSC0003DMT400053842.v4.03 annot-version=v4.03
Sequence

ATGGAAACTTTTAACCTACTCAAATTCTGGCGAAGTTCCGGCACTGATACTTCAACTTGC
CGGGATATTGTCTCTGAAATTGATGAATTAGACTACCTACGTAACCCAGCCATTGAAACT
GATGAAGAAACTGACGACGATGCGGATTCCTTCTTTGATTTGGTTTTCACTGGCCCTGAT
GAACGCCCAAAATTGGACAACAACTCCAAATCCGTTTCTGTTAACACTCCCCGTGAACCG
GAATCCCCGAGAGATGTATTTTTCAAACCAATAGCTTTTCCAATTGACTCTATCTCGAAG
CCTCAATCTCCGATTTCTATACTCAAATCGGCCCCTAAATTTCGGGTCTTCTTTTTGGGC
TTAAGGAAAACAAAGCTGGAGAAGGTAGGCATTGACAATTCTTCTCCGTCCGGTACGAAG
TTTCAAACACAGAAACTGGATCTCAAGCGCTTTCCGGTGAAATGCAATGTGGAAGAGGTT
CCCGTTCCTGTGACCCCTGTATTTACCAGAGACAACAGTTTAAGAAGCAAATTGCAGAAC
GAGAAAGAGGAGGAGCTTTCCGTTGACGAATCGTTGAAGAAATTTGTAAGAGCTGATGTG
CCTAAGTACTTAAAATTGATGAAGCCATTGTATGCCAGAGCTTCAAAAAGGTACACAGAC
AAAATCAGTGTATCACCGTTGTCGTCTCCATCGGCACAATCAATGTGCTCACCCAGAAAA
ACATCAGAGGTGAAACGAGTTGCTTCATTCGGATCTGTACGCAAGCACTTAGGGAAAAGT
CGATCGGCGGCATCCACCTTTGCCGCCGGAGCTTCCTCGTCGCCGTTAAATCGCCGTGAC
AATTCACTTCTACAAGAGCAAAATGACGGAATCCAAGGCGCTATATTACATTGCAAGAGA
TGTTACAGCTCACTAGCAAAAAGTAGCGAAAATCTGGCTAGAGCCTCTTCTTCTTCTGTG
GAGCTGAACAGATGGAGCATATGA