Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053750
CDS Infomation

pacid=37450542 polypeptide=PGSC0003DMP400036236 locus=PGSC0003DMG400020850 ID=PGSC0003DMT400053750.v4.03 annot-version=v4.03
Sequence

ATGCGTGAAATTCTCCATATACAAGGTGGCCAATGTGGCAACCAAATTGGGGCTAAGTTT
TGGGAGGTGGTATGCGCTGAGCATGGAATTGATGCAACCGGAGCGTACCATGGGGAGACA
GATACTCAACTTGAGAGAGTGAATGTATATTATAATGAGGCGAGTTGTGGGCGCTTCGTA
CCTCGTGCTGTTCTTATGGATTTAGAGCCTGGTACTATGGACAGTGTTAGATCTGGAACT
TATGGTCAGATTTTTAGACCTGATAACTTTGTATTCGGTCAATCTGGTGCTGGTAATAAT
TGGGCTAAAGGTCATTATACTGAAGGTGCTGAGTTGATTGATTCGGTTCTCGATGTTGTT
AGGAAAGAAGCTGAGAATTGTGATTGTCTACAAGGGTTTCAGGTGTGTCATTCCCTGGGA
GGAGGGACTGGGTCTGGAATGGGGACACTTCTCATTTCAAAGATTAGAGAGGAATACCCA
GATAGGATGATGCTGACATTCTCTGTCTTTCCATCTCCAAAGGTTTCAGACACAGTTGTA
GAGCCTTACAATGCTACATTGTCTGTTCATCAGCTTGTAGAGAATGCAGATGAGTGCATG
GTTCTTGACAACGAGGCTTTATATGACATTTGTTTCCGAACCCTCAAACTTACAACTCCT
AGCTTTGGTGATTTGAATCACTTAATTTCTGCAACCATGTCCGGAGTTACTTGTTGCCTC
AGATTCCCTGGACAGCTTAACTCTGATCTACGGAAACTTGCTGTGAATCTCATTCCTTTC
CCCCGTCTCCACTTTTTCATGGTTGGGTTTGCTCCACTTACCTCACGTGGTTCACAACAA
TACCGCGCTTTATCTGTTCCTGAGCTTACTCAACAAATGTGGGATGCAAAGAACATGATG
TGTGCTGCTGACCCTAGGCATGGCCGCTATTTGACAGCATCAGCAATGTTTAGGGGGAAA
ATGAGCACCAAGGAAGTTGATGAGCAGATGCTTAATGTGCAGAACAAAAATTCTTCATAC
TTCGTTGAGTGGATTCCCAACAATGTCAAGTCAACAGTCTGTGACATTCCACCAACTGGT
CTAAAGATGGCATCAACTTTCATTGGAAATTCAACCTCAATACAAGAGATGTTCCGTCGT
GTCAGTGAGCAATTCACTGCCATGTTTAGGAGGAAGGCTTTCTTGCATTGGTACACAGGG
GAAGGAATGGATGAGATGGAGTTCACTGAGGCAGAGAGCAACATGAATGATCTGGTCTCC
GAGTACCAACAGTACCAAGATGCAGTAGCAGATGAGGATGAAGAATACGAGGACGAAGAT
GAAGCATATCATGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036236
PEP Infomation

pacid=37450542 transcript=PGSC0003DMT400053750 locus=PGSC0003DMG400020850 ID=PGSC0003DMT400053750.v4.03 annot-version=v4.03
Sequence

MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGAYHGETDTQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRSGTYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDAVADEDEEYEDEDEAYHD*

Transcript Sequence

Transcript ID

PGSC0003DMT400053750
Transcript Infomation

pacid=37450542 locus=PGSC0003DMG400020850 ID=PGSC0003DMT400053750.v4.03 annot-version=v4.03
Sequence

ATGCGTGAAATTCTCCATATACAAGGTGGCCAATGTGGCAACCAAATTGGGGCTAAGTTT
TGGGAGGTGGTATGCGCTGAGCATGGAATTGATGCAACCGGAGCGTACCATGGGGAGACA
GATACTCAACTTGAGAGAGTGAATGTATATTATAATGAGGCGAGTTGTGGGCGCTTCGTA
CCTCGTGCTGTTCTTATGGATTTAGAGCCTGGTACTATGGACAGTGTTAGATCTGGAACT
TATGGTCAGATTTTTAGACCTGATAACTTTGTATTCGGTCAATCTGGTGCTGGTAATAAT
TGGGCTAAAGGTCATTATACTGAAGGTGCTGAGTTGATTGATTCGGTTCTCGATGTTGTT
AGGAAAGAAGCTGAGAATTGTGATTGTCTACAAGGGTTTCAGGTGTGTCATTCCCTGGGA
GGAGGGACTGGGTCTGGAATGGGGACACTTCTCATTTCAAAGATTAGAGAGGAATACCCA
GATAGGATGATGCTGACATTCTCTGTCTTTCCATCTCCAAAGGTTTCAGACACAGTTGTA
GAGCCTTACAATGCTACATTGTCTGTTCATCAGCTTGTAGAGAATGCAGATGAGTGCATG
GTTCTTGACAACGAGGCTTTATATGACATTTGTTTCCGAACCCTCAAACTTACAACTCCT
AGCTTTGGTGATTTGAATCACTTAATTTCTGCAACCATGTCCGGAGTTACTTGTTGCCTC
AGATTCCCTGGACAGCTTAACTCTGATCTACGGAAACTTGCTGTGAATCTCATTCCTTTC
CCCCGTCTCCACTTTTTCATGGTTGGGTTTGCTCCACTTACCTCACGTGGTTCACAACAA
TACCGCGCTTTATCTGTTCCTGAGCTTACTCAACAAATGTGGGATGCAAAGAACATGATG
TGTGCTGCTGACCCTAGGCATGGCCGCTATTTGACAGCATCAGCAATGTTTAGGGGGAAA
ATGAGCACCAAGGAAGTTGATGAGCAGATGCTTAATGTGCAGAACAAAAATTCTTCATAC
TTCGTTGAGTGGATTCCCAACAATGTCAAGTCAACAGTCTGTGACATTCCACCAACTGGT
CTAAAGATGGCATCAACTTTCATTGGAAATTCAACCTCAATACAAGAGATGTTCCGTCGT
GTCAGTGAGCAATTCACTGCCATGTTTAGGAGGAAGGCTTTCTTGCATTGGTACACAGGG
GAAGGAATGGATGAGATGGAGTTCACTGAGGCAGAGAGCAACATGAATGATCTGGTCTCC
GAGTACCAACAGTACCAAGATGCAGTAGCAGATGAGGATGAAGAATACGAGGACGAAGAT
GAAGCATATCATGACTAG