Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053727
CDS Infomation

pacid=37450992 polypeptide=PGSC0003DMP400036228 locus=PGSC0003DMG400020842 ID=PGSC0003DMT400053727.v4.03 annot-version=v4.03
Sequence

ATGTCTGCTGGACGCCACAGATCTGATGAAGGCCCTAAGGTTATTAAACTCAAGATTATG
ATTGACAAGAACAGAAACCGAGTAATCTTTGCAGAGTCGGACCATGAATTCATCGACGCA
CTCTTCTCATTCTTGACACTCCCGTTAGGTACAGTTCTAAGACTTCTTGAAAAAGATATG
GTTCAATTGGGATCAATTAGCCGTGTTTATGCCAGTGTTTATTCGCTTGAGCCAAGGTTC
TTGCGTACAAGCTACTGCAAATCCATGTTGATCATGCCACGGAATGCATCAGAAGTTCAG
TGTGAAAAGTTGAAGCTCAATGTTGATTATTCGGAGAATGCAGGGAAGTTGTTTGTCTGT
AATAGCTATAGCCCTAGGTGTAAAAACATATTCAGTATCTCGCAGAATACACAGTGCTTC
CGCTGTAATAGATTGACACAATTTGATAGAAAAATTAATGAGAAGGAAGAGAAGAGAAGT
TGTCGGGGAGAAAGCGTGGTTGAAGTCTTTCTAAAGGGTGGGGCAGCAAGCTTTATGATT
ACAGATGATTTGCAGGTAATGCCAGCCTCAACTGCTCGTTTAACTTCTTTGTTCGGAAAG
CTCGGAGTCAGTGACAAGAGTGAAATTGAGGCAAAGACTGTAGAAGTTGGTACTGATGAG
GTGTTGCAGCTGCTGAAGTTCTCATTGCTCTCGAAGACGGCTTTGACAAATATGGTACTG
AATAGCCAGGGAAGTTGGTTGAAAGATATATCGAAGTACGAAGATAACCAAACTGCAAAG
TTAGACAAGAAGACCATGTCTCAAAACACAAATAGTATGAGCCTGAAGCTTATAGTCAGC
AAAAGTAAGAAGAAGGTTTTGTATGCAGAAGCCGGGGTCAAGCTTGTAGACTTCCTTTTC
AGTTTCCTTGTATTCCCTTTAGGGGCTGTAGTAAAGCATCTAGGTGGTAACTCAAGACTT
GGATGTATAGATAATTTGTATAAGGGTGCTGTTGAGTTGAGTTCGGAAAATTATATCAAA
TCAGAAGAGTGCAAAAATATGTTACTCTCTCCGAAACTGTTTCCACACTCTGGTTTTGAC
AGTCATATTCTCGAGGTGGAAGAGGAGTACCCGAAATACAGATATGATGACTCAGGATGT
ATAGAATTAGCAAGGAACACCAATAAATCCGAGGGATCATCGATAGTAAATGAGGAAGAA
GCAAGCGATTTAGCCATCAATATTTTGGATCCAAAGTCTCCAACAGGAGAAACTATAAAG
GGTGAAGGGTACTTGAAAGGACCCGCAACGTTTATGATAATGGATAATCTTCTAGTGACT
CCGTTTTCCCCTACCGCAATTATAACTCAGCTTAATCAAATGAAGGTGTCAACCAGTGAT
GTCGAGGAACGCACTGTAACTGTTGGGAAGGACGAGGCCCTGAATTTGCTGAAAGCGTCT
TTAATCTCAAAAACAGTTCTAAATGATGTTTTCAATATTAGGGAACCTTATCCTAAGGTT
ATGCTTAAAGTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400036228
PEP Infomation

pacid=37450992 transcript=PGSC0003DMT400053727 locus=PGSC0003DMG400020842 ID=PGSC0003DMT400053727.v4.03 annot-version=v4.03
Sequence

MSAGRHRSDEGPKVIKLKIMIDKNRNRVIFAESDHEFIDALFSFLTLPLGTVLRLLEKDM
VQLGSISRVYASVYSLEPRFLRTSYCKSMLIMPRNASEVQCEKLKLNVDYSENAGKLFVC
NSYSPRCKNIFSISQNTQCFRCNRLTQFDRKINEKEEKRSCRGESVVEVFLKGGAASFMI
TDDLQVMPASTARLTSLFGKLGVSDKSEIEAKTVEVGTDEVLQLLKFSLLSKTALTNMVL
NSQGSWLKDISKYEDNQTAKLDKKTMSQNTNSMSLKLIVSKSKKKVLYAEAGVKLVDFLF
SFLVFPLGAVVKHLGGNSRLGCIDNLYKGAVELSSENYIKSEECKNMLLSPKLFPHSGFD
SHILEVEEEYPKYRYDDSGCIELARNTNKSEGSSIVNEEEASDLAINILDPKSPTGETIK
GEGYLKGPATFMIMDNLLVTPFSPTAIITQLNQMKVSTSDVEERTVTVGKDEALNLLKAS
LISKTVLNDVFNIREPYPKVMLKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400053727
Transcript Infomation

pacid=37450992 locus=PGSC0003DMG400020842 ID=PGSC0003DMT400053727.v4.03 annot-version=v4.03
Sequence

ATGTCTGCTGGACGCCACAGATCTGATGAAGGCCCTAAGGTTATTAAACTCAAGATTATG
ATTGACAAGAACAGAAACCGAGTAATCTTTGCAGAGTCGGACCATGAATTCATCGACGCA
CTCTTCTCATTCTTGACACTCCCGTTAGGTACAGTTCTAAGACTTCTTGAAAAAGATATG
GTTCAATTGGGATCAATTAGCCGTGTTTATGCCAGTGTTTATTCGCTTGAGCCAAGGTTC
TTGCGTACAAGCTACTGCAAATCCATGTTGATCATGCCACGGAATGCATCAGAAGTTCAG
TGTGAAAAGTTGAAGCTCAATGTTGATTATTCGGAGAATGCAGGGAAGTTGTTTGTCTGT
AATAGCTATAGCCCTAGGTGTAAAAACATATTCAGTATCTCGCAGAATACACAGTGCTTC
CGCTGTAATAGATTGACACAATTTGATAGAAAAATTAATGAGAAGGAAGAGAAGAGAAGT
TGTCGGGGAGAAAGCGTGGTTGAAGTCTTTCTAAAGGGTGGGGCAGCAAGCTTTATGATT
ACAGATGATTTGCAGGTAATGCCAGCCTCAACTGCTCGTTTAACTTCTTTGTTCGGAAAG
CTCGGAGTCAGTGACAAGAGTGAAATTGAGGCAAAGACTGTAGAAGTTGGTACTGATGAG
GTGTTGCAGCTGCTGAAGTTCTCATTGCTCTCGAAGACGGCTTTGACAAATATGGTACTG
AATAGCCAGGGAAGTTGGTTGAAAGATATATCGAAGTACGAAGATAACCAAACTGCAAAG
TTAGACAAGAAGACCATGTCTCAAAACACAAATAGTATGAGCCTGAAGCTTATAGTCAGC
AAAAGTAAGAAGAAGGTTTTGTATGCAGAAGCCGGGGTCAAGCTTGTAGACTTCCTTTTC
AGTTTCCTTGTATTCCCTTTAGGGGCTGTAGTAAAGCATCTAGGTGGTAACTCAAGACTT
GGATGTATAGATAATTTGTATAAGGGTGCTGTTGAGTTGAGTTCGGAAAATTATATCAAA
TCAGAAGAGTGCAAAAATATGTTACTCTCTCCGAAACTGTTTCCACACTCTGGTTTTGAC
AGTCATATTCTCGAGGTGGAAGAGGAGTACCCGAAATACAGATATGATGACTCAGGATGT
ATAGAATTAGCAAGGAACACCAATAAATCCGAGGGATCATCGATAGTAAATGAGGAAGAA
GCAAGCGATTTAGCCATCAATATTTTGGATCCAAAGTCTCCAACAGGAGAAACTATAAAG
GGTGAAGGGTACTTGAAAGGACCCGCAACGTTTATGATAATGGATAATCTTCTAGTGACT
CCGTTTTCCCCTACCGCAATTATAACTCAGCTTAATCAAATGAAGGTGTCAACCAGTGAT
GTCGAGGAACGCACTGTAACTGTTGGGAAGGACGAGGCCCTGAATTTGCTGAAAGCGTCT
TTAATCTCAAAAACAGTTCTAAATGATGTTTTCAATATTAGGGAACCTTATCCTAAGGTT
ATGCTTAAAGTATGA