Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053680
CDS Infomation

pacid=37452153 polypeptide=PGSC0003DMP400036201 locus=PGSC0003DMG400020824 ID=PGSC0003DMT400053680.v4.03 annot-version=v4.03
Sequence

ATGCCTAATCTTGGAGCTAATAAAGCTGACACAGAGGGAAATGGTGGTTCCGGCCGTCAT
CGCCGCCGCGGGAGGCCATCCATGGCGGCGAGCAGTGAGACAACCACAACTGATGGGAGT
TTCCACTTCACTGATTCTGATTCTGACCAATCTTGGCACTCACCTTTAGGCTCTATGGAT
GATGTTTCAGTATATTGTGATCAGCAGCCACTGAGGAGGGACAACAAGCAAAGAGGGTAT
AATTCTTTGTCAGATGATGAGATTGATTTGGAGTGTGGTGAATTGGAGATGAAGTTGCAT
AATAAAGAAGAGAAGGACTGTAGGATTTGTCATTTGAGTTTGTTAAGAAGTGGAGGGATT
AGTAGTGGTGGAGATCAAGTGCAAGAGGCTTCAGGAGGGATGGCTATTGAATTGGGATGT
TCTTGCAAAGGTGACTTGGGTGCTGCTCACAAACAATGTGCTGAGACTTGGTTCAAAACC
AAGGGAAACACAATTTGTGAAATCTGTGGTACCAATGCACTGAACATTGCTGGAGAGCAG
ACAAATGAAGCCAATAATGCTTCAGTAGCCCCTCTTGCAGCATCCGCAGCACCTGTAGCC
CTTTCTGAAACCCGAGGCTTTTGGCATGGGCGCCGTGTCATGAATTTTCTACTTGCATCC
ATGGTTTTTGCCTTTGTCATCTCATGGCTTTTTCACTTCAATATATTGCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036201
PEP Infomation

pacid=37452153 transcript=PGSC0003DMT400053680 locus=PGSC0003DMG400020824 ID=PGSC0003DMT400053680.v4.03 annot-version=v4.03
Sequence

MPNLGANKADTEGNGGSGRHRRRGRPSMAASSETTTTDGSFHFTDSDSDQSWHSPLGSMD
DVSVYCDQQPLRRDNKQRGYNSLSDDEIDLECGELEMKLHNKEEKDCRICHLSLLRSGGI
SSGGDQVQEASGGMAIELGCSCKGDLGAAHKQCAETWFKTKGNTICEICGTNALNIAGEQ
TNEANNASVAPLAASAAPVALSETRGFWHGRRVMNFLLASMVFAFVISWLFHFNILP*

Transcript Sequence

Transcript ID

PGSC0003DMT400053680
Transcript Infomation

pacid=37452153 locus=PGSC0003DMG400020824 ID=PGSC0003DMT400053680.v4.03 annot-version=v4.03
Sequence

ATGCCTAATCTTGGAGCTAATAAAGCTGACACAGAGGGAAATGGTGGTTCCGGCCGTCAT
CGCCGCCGCGGGAGGCCATCCATGGCGGCGAGCAGTGAGACAACCACAACTGATGGGAGT
TTCCACTTCACTGATTCTGATTCTGACCAATCTTGGCACTCACCTTTAGGCTCTATGGAT
GATGTTTCAGTATATTGTGATCAGCAGCCACTGAGGAGGGACAACAAGCAAAGAGGGTAT
AATTCTTTGTCAGATGATGAGATTGATTTGGAGTGTGGTGAATTGGAGATGAAGTTGCAT
AATAAAGAAGAGAAGGACTGTAGGATTTGTCATTTGAGTTTGTTAAGAAGTGGAGGGATT
AGTAGTGGTGGAGATCAAGTGCAAGAGGCTTCAGGAGGGATGGCTATTGAATTGGGATGT
TCTTGCAAAGGTGACTTGGGTGCTGCTCACAAACAATGTGCTGAGACTTGGTTCAAAACC
AAGGGAAACACAATTTGTGAAATCTGTGGTACCAATGCACTGAACATTGCTGGAGAGCAG
ACAAATGAAGCCAATAATGCTTCAGTAGCCCCTCTTGCAGCATCCGCAGCACCTGTAGCC
CTTTCTGAAACCCGAGGCTTTTGGCATGGGCGCCGTGTCATGAATTTTCTACTTGCATCC
ATGGTTTTTGCCTTTGTCATCTCATGGCTTTTTCACTTCAATATATTGCCTTAG