Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053670
CDS Infomation

pacid=37468978 polypeptide=PGSC0003DMP400036194 locus=PGSC0003DMG400020819 ID=PGSC0003DMT400053670.v4.03 annot-version=v4.03
Sequence

ATGGGTTCGAGTAGTAGCAAGAATAATGCAGTTGATTCACCGCTGCCACCGTCATCTCCG
GCGGCTTCATCTTCATCATCGGTGGTCGTTCGGAGATCTCGATCCACTCGGAGTAAAGTT
TTTCAGTCCGCGTGTCTCGGATCTCGCAATTCTGAAAATGAAGCAGCACAGGCTTTGGAA
ACTCAAACGAAACGAAATGAGGGTAGTGGTGCTTGTTTGAGTGAGACTAAATCAGGAGGA
AGAAAAGCTGAATGGTTTGGAAAGGTTAAAATTAAGAAGCATGATGAAACATGTGTAGCC
TCCAATGTTGAGATTGATGATTGGGATGAATCACGCTTATCTGATACAATTGCTAGGAAA
GGTGATGCTTCTTCTCGAGCTTCATCATCTAGATCATCGAATCTTTCTGGTCGTTTCCTC
CCCCGGTTCAATTTTCGTCCTGGAAACATGAGCTTCCGGCTGAGCAGAGCAAACAGTTTA
GGGTCAGCAAGGTCCCTTTTTGCATCTTCACAGAGGTTTGCTACTTCAATTGATGAGGAT
GAGCTTCGGCGCTCAAGTTCGTCAGGTAGATTCACTGACAGAAATGAAAGGCCACAGAAT
TGTGACTTCCTTCCTAGTTGTTTCAGCAATCAGTCTCCTAGCCAATGCTCTGAAGATGTT
ACTTCTAATAACTTAGTATTCACTCCTTCAACTGCTAACTTCTCTGATAATTTCACGGAT
GAGCCACATCCTGCTTCCAGAAGAGGTTTGTCAGGTGATAGACATGATACTAGAGTAGAG
TGTACTGTTAATTTATTTTCTCCAAGAAATAATAATTATACTAATGGTTTCGAGACAAGA
GTTTCTGACAGAAGGAGTGCAGCTCGCGAACCTACTGAAAGGAACATCAGTATCAGCAGA
ACCCTGAGTGTTGGTAGACTTCGCGATAGGGTTGTTCGAAGATCATCATTTCCTGATGTT
TGTTCCTTTCAACGGGAAACAGAAACTGGGCATGCTAGTGATAATAGTATGAGACAGAAT
TTAGGTGGTGAATTAAGTTCGGTAGCATCCGAAGGGAATGACTTAATTCTATCAAATGCT
TCTGGCTTTGCATCATCTGGTGCCTCTACCTCCTTGTATGGGAGCCAATATTATGCAGTT
GAGAGCCCAAGAGGAAGAGAAACAAGATATCATGATCTTCTGGAGCATAGGTCAAATTGG
CTAGAGCGGCGAAGAAGAATAAGATCTCAGGTCTATGCCCTTCAACGACTGGGAAGGCGC
TTTGAGAACCATTCTGGACATGAGAGGTCTTGTGTTTTATCTGGTCAGCATCGAACAGGT
CACTGTACATGTCGTATCAGTAGCCAAGGAGCTAACTTAGATAGTGACAGTAGTGCCAGG
GCAAGCATCTCAAGAATTGTTATGCTGGCAGAAGCTTTATTCGAGGTTCTGGATGAAATT
CATCAGCAATCAGTGGTATTATCATCCCAGCCTTCTGTATCCTCAATTGGATCTGTTCCA
GCACCCAATGAAGTTGTTGAATCCCTACCTGTCAAATCATACAACAAATTTCGTAGGAGT
TCGAATGACGAAGTTGCACAATGTTACATTTGTCTGGTTGAGTACGAGGAAGGAGATATG
TTACGAACACTGCCTTGCCATCATGAATTTCACAGGACTTGTGTTGACAAATGGCTCAAA
GAAGTTCACAGGGTATGCCCATTATGTAGAGGTGATATCTGCCAAGGGAATGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036194
PEP Infomation

pacid=37468978 transcript=PGSC0003DMT400053670 locus=PGSC0003DMG400020819 ID=PGSC0003DMT400053670.v4.03 annot-version=v4.03
Sequence

MGSSSSKNNAVDSPLPPSSPAASSSSSVVVRRSRSTRSKVFQSACLGSRNSENEAAQALE
TQTKRNEGSGACLSETKSGGRKAEWFGKVKIKKHDETCVASNVEIDDWDESRLSDTIARK
GDASSRASSSRSSNLSGRFLPRFNFRPGNMSFRLSRANSLGSARSLFASSQRFATSIDED
ELRRSSSSGRFTDRNERPQNCDFLPSCFSNQSPSQCSEDVTSNNLVFTPSTANFSDNFTD
EPHPASRRGLSGDRHDTRVECTVNLFSPRNNNYTNGFETRVSDRRSAAREPTERNISISR
TLSVGRLRDRVVRRSSFPDVCSFQRETETGHASDNSMRQNLGGELSSVASEGNDLILSNA
SGFASSGASTSLYGSQYYAVESPRGRETRYHDLLEHRSNWLERRRRIRSQVYALQRLGRR
FENHSGHERSCVLSGQHRTGHCTCRISSQGANLDSDSSARASISRIVMLAEALFEVLDEI
HQQSVVLSSQPSVSSIGSVPAPNEVVESLPVKSYNKFRRSSNDEVAQCYICLVEYEEGDM
LRTLPCHHEFHRTCVDKWLKEVHRVCPLCRGDICQGNV*

Transcript Sequence

Transcript ID

PGSC0003DMT400053670
Transcript Infomation

pacid=37468978 locus=PGSC0003DMG400020819 ID=PGSC0003DMT400053670.v4.03 annot-version=v4.03
Sequence

ATGGGTTCGAGTAGTAGCAAGAATAATGCAGTTGATTCACCGCTGCCACCGTCATCTCCG
GCGGCTTCATCTTCATCATCGGTGGTCGTTCGGAGATCTCGATCCACTCGGAGTAAAGTT
TTTCAGTCCGCGTGTCTCGGATCTCGCAATTCTGAAAATGAAGCAGCACAGGCTTTGGAA
ACTCAAACGAAACGAAATGAGGGTAGTGGTGCTTGTTTGAGTGAGACTAAATCAGGAGGA
AGAAAAGCTGAATGGTTTGGAAAGGTTAAAATTAAGAAGCATGATGAAACATGTGTAGCC
TCCAATGTTGAGATTGATGATTGGGATGAATCACGCTTATCTGATACAATTGCTAGGAAA
GGTGATGCTTCTTCTCGAGCTTCATCATCTAGATCATCGAATCTTTCTGGTCGTTTCCTC
CCCCGGTTCAATTTTCGTCCTGGAAACATGAGCTTCCGGCTGAGCAGAGCAAACAGTTTA
GGGTCAGCAAGGTCCCTTTTTGCATCTTCACAGAGGTTTGCTACTTCAATTGATGAGGAT
GAGCTTCGGCGCTCAAGTTCGTCAGGTAGATTCACTGACAGAAATGAAAGGCCACAGAAT
TGTGACTTCCTTCCTAGTTGTTTCAGCAATCAGTCTCCTAGCCAATGCTCTGAAGATGTT
ACTTCTAATAACTTAGTATTCACTCCTTCAACTGCTAACTTCTCTGATAATTTCACGGAT
GAGCCACATCCTGCTTCCAGAAGAGGTTTGTCAGGTGATAGACATGATACTAGAGTAGAG
TGTACTGTTAATTTATTTTCTCCAAGAAATAATAATTATACTAATGGTTTCGAGACAAGA
GTTTCTGACAGAAGGAGTGCAGCTCGCGAACCTACTGAAAGGAACATCAGTATCAGCAGA
ACCCTGAGTGTTGGTAGACTTCGCGATAGGGTTGTTCGAAGATCATCATTTCCTGATGTT
TGTTCCTTTCAACGGGAAACAGAAACTGGGCATGCTAGTGATAATAGTATGAGACAGAAT
TTAGGTGGTGAATTAAGTTCGGTAGCATCCGAAGGGAATGACTTAATTCTATCAAATGCT
TCTGGCTTTGCATCATCTGGTGCCTCTACCTCCTTGTATGGGAGCCAATATTATGCAGTT
GAGAGCCCAAGAGGAAGAGAAACAAGATATCATGATCTTCTGGAGCATAGGTCAAATTGG
CTAGAGCGGCGAAGAAGAATAAGATCTCAGGTCTATGCCCTTCAACGACTGGGAAGGCGC
TTTGAGAACCATTCTGGACATGAGAGGTCTTGTGTTTTATCTGGTCAGCATCGAACAGGT
CACTGTACATGTCGTATCAGTAGCCAAGGAGCTAACTTAGATAGTGACAGTAGTGCCAGG
GCAAGCATCTCAAGAATTGTTATGCTGGCAGAAGCTTTATTCGAGGTTCTGGATGAAATT
CATCAGCAATCAGTGGTATTATCATCCCAGCCTTCTGTATCCTCAATTGGATCTGTTCCA
GCACCCAATGAAGTTGTTGAATCCCTACCTGTCAAATCATACAACAAATTTCGTAGGAGT
TCGAATGACGAAGTTGCACAATGTTACATTTGTCTGGTTGAGTACGAGGAAGGAGATATG
TTACGAACACTGCCTTGCCATCATGAATTTCACAGGACTTGTGTTGACAAATGGCTCAAA
GAAGTTCACAGGGTATGCCCATTATGTAGAGGTGATATCTGCCAAGGGAATGTTTGA