Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053666
CDS Infomation

pacid=37470653 polypeptide=PGSC0003DMP400036191 locus=PGSC0003DMG400020817 ID=PGSC0003DMT400053666.v4.03 annot-version=v4.03
Sequence

ATGCTATCGGCCTCTTCCGCCGCCACCACGCCGGCCACCGCCATTGCCGCCAAAGCTTTC
CGCACCCAAATTCCGCAGCTCCACACCATCCGAACAAGAACTGATCATTATTTCGGCCCA
CAACAGTTCGCGAAGACATCGTATAGGTTGATTGTTCATCCAGTGAAGGCCATGACTGAA
ACTGTAGCTACGCCTCAGTCTGCTCCCAAGTTGTCAACTTCAGGGAGGAAGCAAGCATTG
ATATCACTTTCAGATAAGACAGACTTGGCTAAGCTTGGCAATGGGCTGCAGGAGTTGGGG
TACACAATTGTTTCAACGGGAGGCACTGCATCCGCTTTGGAATGTGCTGGGGTGTCTGTC
ACCAAAGTGGAAGAGCTGACGCGTTTCCCTGAAATGCTTGATGGCCGTGTAAAAACTTTG
CATCCAGGCATTCATGGAGGTATTCTTGCTAGAAGAGATCAGGAGCATCACATGGAAGCT
CTTGAAAAGCATGAAATTGGTACATTTGATGTTGTAGTGGTCAACTTGTATCCCTTTTAT
GCCAAGGTTTCTTCTTCAAGTGGAATTTCATTTGAGGATGGAATTGAAAACATCGATATT
GGTGGACCTGCCATGATTAGAGCTGCTGCAAAGAATCATAGGGATGTTTTGGTCGTAGTT
GATTCTGAAGATTACCCAGATCTTTTGGAGTTCCTTCGTGGCGATAATGATGACCAACAA
TTTCGAAGGAAGTTGGCCTGGAAAGCTTTTCAACATGTTGCTTCATATGATTCTGCAGTT
TCAGAGTGGCTGTGGAAACAGACTGTTGGAGATAAGTTCCCTCCCAGCCTGACAGTGCCA
CTCTCTCTTAAAGACCAACTTCGATATGGTGAAAACCCTCATCAGAAGGCTGCAGTTTAT
GTTGACAAGTCTCTGTCTGAGGTTAACGCTGGTGGAATTGCAACTGTTATCCAACACCAT
GGCAAGGAGATGTCATATAACAACTATCTGGACACCGATGCAGCTTGGAATTGTGTCTGT
GATTTTAATAAACCAACATGTGTTGTTGTGAAGCATACAAATCCTTGTGGAGTTGCATCA
CGGAATGATATCATTGAAGCATATAGGCTAGCTGTGAAAGCAGATCCAGTGAGTGCATTT
GGTGGTATAGTAGCCTTCAATGTCGAAGTTGATGAGGCTCTTGCAAAGGATATTCGAGAA
TTTAGAAGCCCTACAGATGGTGAGACTAGGATGTTTTATGAAATAGTAGTCGCACCAAAG
TACACAGAGAAGGGTCTTGAAGTTCTCCGTGGGAAGTCTAAGACTTTGAGAATCCTTGAG
GCAAGTAAAAACAACAAGGGAAAACTTTCTCTTAGGCAAATTGGTGGTGGTTGGTTAGCT
CAGGACTCAGATGATTTGACCCCGGAAGATATCCCATTCAATGTCATGTCTGACAAAACT
CCACAAGAAAATGAGCTTAATGATGCACAGTTTGCTTGGTTATGTGTCAAGCATGTCAAG
AGCAATGCCATAGTAATTGCAAAGAACAATTGTATGTTAGGAATGGGGAGTGGACAACCA
AATCGTCTAGAGAGTTTGAGGATTGCTATGAGGAAAGCTGGAGATGAAGTAAAAGGAGCT
GCTTTGGCAAGTGATGCTTTCTTCCCATTTGCATGGAATGATGCTGTTGAAGAGGCGTGT
CAAAGCGGAGTGAGCGTTATTGCAGAACCAGGAGGGAGTATAAGGGACAAGGATGCAGTG
GAGTGCTGTAACAAGTATGGAGTCTCACTTGTTTTCACCAACGTGAGACACTTCAGGCAT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400036191
PEP Infomation

pacid=37470653 transcript=PGSC0003DMT400053666 locus=PGSC0003DMG400020817 ID=PGSC0003DMT400053666.v4.03 annot-version=v4.03
Sequence

MLSASSAATTPATAIAAKAFRTQIPQLHTIRTRTDHYFGPQQFAKTSYRLIVHPVKAMTE
TVATPQSAPKLSTSGRKQALISLSDKTDLAKLGNGLQELGYTIVSTGGTASALECAGVSV
TKVEELTRFPEMLDGRVKTLHPGIHGGILARRDQEHHMEALEKHEIGTFDVVVVNLYPFY
AKVSSSSGISFEDGIENIDIGGPAMIRAAAKNHRDVLVVVDSEDYPDLLEFLRGDNDDQQ
FRRKLAWKAFQHVASYDSAVSEWLWKQTVGDKFPPSLTVPLSLKDQLRYGENPHQKAAVY
VDKSLSEVNAGGIATVIQHHGKEMSYNNYLDTDAAWNCVCDFNKPTCVVVKHTNPCGVAS
RNDIIEAYRLAVKADPVSAFGGIVAFNVEVDEALAKDIREFRSPTDGETRMFYEIVVAPK
YTEKGLEVLRGKSKTLRILEASKNNKGKLSLRQIGGGWLAQDSDDLTPEDIPFNVMSDKT
PQENELNDAQFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRLESLRIAMRKAGDEVKGA
ALASDAFFPFAWNDAVEEACQSGVSVIAEPGGSIRDKDAVECCNKYGVSLVFTNVRHFRH
*

Transcript Sequence

Transcript ID

PGSC0003DMT400053666
Transcript Infomation

pacid=37470653 locus=PGSC0003DMG400020817 ID=PGSC0003DMT400053666.v4.03 annot-version=v4.03
Sequence

ATGCTATCGGCCTCTTCCGCCGCCACCACGCCGGCCACCGCCATTGCCGCCAAAGCTTTC
CGCACCCAAATTCCGCAGCTCCACACCATCCGAACAAGAACTGATCATTATTTCGGCCCA
CAACAGTTCGCGAAGACATCGTATAGGTTGATTGTTCATCCAGTGAAGGCCATGACTGAA
ACTGTAGCTACGCCTCAGTCTGCTCCCAAGTTGTCAACTTCAGGGAGGAAGCAAGCATTG
ATATCACTTTCAGATAAGACAGACTTGGCTAAGCTTGGCAATGGGCTGCAGGAGTTGGGG
TACACAATTGTTTCAACGGGAGGCACTGCATCCGCTTTGGAATGTGCTGGGGTGTCTGTC
ACCAAAGTGGAAGAGCTGACGCGTTTCCCTGAAATGCTTGATGGCCGTGTAAAAACTTTG
CATCCAGGCATTCATGGAGGTATTCTTGCTAGAAGAGATCAGGAGCATCACATGGAAGCT
CTTGAAAAGCATGAAATTGGTACATTTGATGTTGTAGTGGTCAACTTGTATCCCTTTTAT
GCCAAGGTTTCTTCTTCAAGTGGAATTTCATTTGAGGATGGAATTGAAAACATCGATATT
GGTGGACCTGCCATGATTAGAGCTGCTGCAAAGAATCATAGGGATGTTTTGGTCGTAGTT
GATTCTGAAGATTACCCAGATCTTTTGGAGTTCCTTCGTGGCGATAATGATGACCAACAA
TTTCGAAGGAAGTTGGCCTGGAAAGCTTTTCAACATGTTGCTTCATATGATTCTGCAGTT
TCAGAGTGGCTGTGGAAACAGACTGTTGGAGATAAGTTCCCTCCCAGCCTGACAGTGCCA
CTCTCTCTTAAAGACCAACTTCGATATGGTGAAAACCCTCATCAGAAGGCTGCAGTTTAT
GTTGACAAGTCTCTGTCTGAGGTTAACGCTGGTGGAATTGCAACTGTTATCCAACACCAT
GGCAAGGAGATGTCATATAACAACTATCTGGACACCGATGCAGCTTGGAATTGTGTCTGT
GATTTTAATAAACCAACATGTGTTGTTGTGAAGCATACAAATCCTTGTGGAGTTGCATCA
CGGAATGATATCATTGAAGCATATAGGCTAGCTGTGAAAGCAGATCCAGTGAGTGCATTT
GGTGGTATAGTAGCCTTCAATGTCGAAGTTGATGAGGCTCTTGCAAAGGATATTCGAGAA
TTTAGAAGCCCTACAGATGGTGAGACTAGGATGTTTTATGAAATAGTAGTCGCACCAAAG
TACACAGAGAAGGGTCTTGAAGTTCTCCGTGGGAAGTCTAAGACTTTGAGAATCCTTGAG
GCAAGTAAAAACAACAAGGGAAAACTTTCTCTTAGGCAAATTGGTGGTGGTTGGTTAGCT
CAGGACTCAGATGATTTGACCCCGGAAGATATCCCATTCAATGTCATGTCTGACAAAACT
CCACAAGAAAATGAGCTTAATGATGCACAGTTTGCTTGGTTATGTGTCAAGCATGTCAAG
AGCAATGCCATAGTAATTGCAAAGAACAATTGTATGTTAGGAATGGGGAGTGGACAACCA
AATCGTCTAGAGAGTTTGAGGATTGCTATGAGGAAAGCTGGAGATGAAGTAAAAGGAGCT
GCTTTGGCAAGTGATGCTTTCTTCCCATTTGCATGGAATGATGCTGTTGAAGAGGCGTGT
CAAAGCGGAGTGAGCGTTATTGCAGAACCAGGAGGGAGTATAAGGGACAAGGATGCAGTG
GAGTGCTGTAACAAGTATGGAGTCTCACTTGTTTTCACCAACGTGAGACACTTCAGGCAT
TAG