Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053650
CDS Infomation

pacid=37467602 polypeptide=PGSC0003DMP400036179 locus=PGSC0003DMG400020811 ID=PGSC0003DMT400053650.v4.03 annot-version=v4.03
Sequence

ATGGTAATCATGAGGAGTAGACTTGCCTGCTGTACAAGAGATAGAGAGATCAGCATTGAC
TTTGATGAAAATCAGAGAATTACAACATATGATGGCCTTGAAAGTATTTTGAACAGTCGG
CCGTATGACAATCAAAGTGTCACTAGCAGAGGTGATGGAGGTGTTACAGATTCCTTGGAT
GATGATGACTCAAGCAGCAGTTCTAGCAATAATGTTTTTGGATCTTTCTCGTCTCACTGG
ACAACAATGAAGAGGGATGATCAGGGATCTGAGGAGTGGGATTTCTCAGCAAGCCCAAAA
CATTACTATGTAAAAGAAAAACCGGCTTATACAACCCAGTTTTCCGATTTGGAAACAATG
AAAGAAAAATTTGCAAAGTTGTTGCTGGGGGAGGATGTGACTGGAGGAAGCAAGGGGGTT
TCCACTGCATTAGCACTGTCAAATGCCATTACAAATCTTGCAGCATCAGTGTTTGGGGAA
CTTTGGAAATTGGAGCCACTTGCAGAGGATGGGAGGAGGAAATGGAAGAGAGAAATGGAG
TGGTTGCTCTCTCCTACGAACCATATGATTGAGTTGGTTCCTGCTAAACAAACTGGTTCT
AATGGCCAGAAATTGGAGATCATGGTTCCAAAAGCTCGTGCAGACATCCATATGAATCTT
CCAGCACTTCAGAAGTTGGACTCCATGCTTCTTGAAGCTCTGGATTCAATGGTTAATACT
GAGTTTTGGTATACGGAAGTGGGTAGCCGAGCAGAAGGAAGAAGTAGAAGTGCTGGGGAG
AGCAAAAGGTGGTGGCTTCCGTCACCCCAGGTACCCATAGCTGGGCTCTCTGATCCTGAA
AGAAACAAATTGTTGAATCAGGGTAAGTTGGTGAATCAAATATACAAGGCAGCTAAAGCT
ATCAACGAAAATGTTTTGTCTGAAATGCCTGTTCCAACAATCATTAAAGAAGCACTTCCA
AAGTCTGGCAGGACAAGTCTTGGAGAGGACCTTTATAGGATCCTGAATGCGGAATCAACA
TCTGTGGAGGATATGCTCAATTTCCTTAATGTAAGATCTGAACACAATGCCCTTGAAGCT
GTTAACAGGTTGGAGGCTGCAATACTTGCATGGAAAGAGAAAGTAGCTGACCATGTCTGT
GGAAAATCTCCAGCTCGAACATCTTGGTCTTTCAAAAAAGATCCAATATCTGAACTGGAC
AAGATTGAGGTGTTATCAAGCAGAGCAGAAGCTCTTCTGCAGCAACTCATGAATAAATAC
CCAAACCTTCCTCGGACATTCCTCAATGTCACAAAGATCCAGTATGGCAAGGATATCGGG
TGTTCAATTCTTGAAGCATACTCTCGTGTTCTGTTGAACTTGGCATTCAGCATCCTGACT
AGGATAGGAGAGATTCTGCAAGAAGACATTTTGAGCAATCCCAATTCTCCCGCGGCTTCA
TGCCACCTTCCTGGCATAAGAATTGCAGGATTGACAGATAGTCCCATGGCTAGTCGTGTG
AGGCACTCGTTGATTGATCAGATGAATAAAACAGATGGACGTTGTTGTGATTCTCGTCGT
ACCAATGCTTCTGATATAGACATTGAGTTTGCTGAATCAAGGTTAAGTTCAGTAACTGCA
ACGCCAAGCCGAAGAGTGTGGTGCATAGGCAGAGAAGCTTGTAGCAGCATGTCTGCTGCA
AACTCACCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036179
PEP Infomation

pacid=37467602 transcript=PGSC0003DMT400053650 locus=PGSC0003DMG400020811 ID=PGSC0003DMT400053650.v4.03 annot-version=v4.03
Sequence

MVIMRSRLACCTRDREISIDFDENQRITTYDGLESILNSRPYDNQSVTSRGDGGVTDSLD
DDDSSSSSSNNVFGSFSSHWTTMKRDDQGSEEWDFSASPKHYYVKEKPAYTTQFSDLETM
KEKFAKLLLGEDVTGGSKGVSTALALSNAITNLAASVFGELWKLEPLAEDGRRKWKREME
WLLSPTNHMIELVPAKQTGSNGQKLEIMVPKARADIHMNLPALQKLDSMLLEALDSMVNT
EFWYTEVGSRAEGRSRSAGESKRWWLPSPQVPIAGLSDPERNKLLNQGKLVNQIYKAAKA
INENVLSEMPVPTIIKEALPKSGRTSLGEDLYRILNAESTSVEDMLNFLNVRSEHNALEA
VNRLEAAILAWKEKVADHVCGKSPARTSWSFKKDPISELDKIEVLSSRAEALLQQLMNKY
PNLPRTFLNVTKIQYGKDIGCSILEAYSRVLLNLAFSILTRIGEILQEDILSNPNSPAAS
CHLPGIRIAGLTDSPMASRVRHSLIDQMNKTDGRCCDSRRTNASDIDIEFAESRLSSVTA
TPSRRVWCIGREACSSMSAANSP*

Transcript Sequence

Transcript ID

PGSC0003DMT400053650
Transcript Infomation

pacid=37467602 locus=PGSC0003DMG400020811 ID=PGSC0003DMT400053650.v4.03 annot-version=v4.03
Sequence

ATGGTAATCATGAGGAGTAGACTTGCCTGCTGTACAAGAGATAGAGAGATCAGCATTGAC
TTTGATGAAAATCAGAGAATTACAACATATGATGGCCTTGAAAGTATTTTGAACAGTCGG
CCGTATGACAATCAAAGTGTCACTAGCAGAGGTGATGGAGGTGTTACAGATTCCTTGGAT
GATGATGACTCAAGCAGCAGTTCTAGCAATAATGTTTTTGGATCTTTCTCGTCTCACTGG
ACAACAATGAAGAGGGATGATCAGGGATCTGAGGAGTGGGATTTCTCAGCAAGCCCAAAA
CATTACTATGTAAAAGAAAAACCGGCTTATACAACCCAGTTTTCCGATTTGGAAACAATG
AAAGAAAAATTTGCAAAGTTGTTGCTGGGGGAGGATGTGACTGGAGGAAGCAAGGGGGTT
TCCACTGCATTAGCACTGTCAAATGCCATTACAAATCTTGCAGCATCAGTGTTTGGGGAA
CTTTGGAAATTGGAGCCACTTGCAGAGGATGGGAGGAGGAAATGGAAGAGAGAAATGGAG
TGGTTGCTCTCTCCTACGAACCATATGATTGAGTTGGTTCCTGCTAAACAAACTGGTTCT
AATGGCCAGAAATTGGAGATCATGGTTCCAAAAGCTCGTGCAGACATCCATATGAATCTT
CCAGCACTTCAGAAGTTGGACTCCATGCTTCTTGAAGCTCTGGATTCAATGGTTAATACT
GAGTTTTGGTATACGGAAGTGGGTAGCCGAGCAGAAGGAAGAAGTAGAAGTGCTGGGGAG
AGCAAAAGGTGGTGGCTTCCGTCACCCCAGGTACCCATAGCTGGGCTCTCTGATCCTGAA
AGAAACAAATTGTTGAATCAGGGTAAGTTGGTGAATCAAATATACAAGGCAGCTAAAGCT
ATCAACGAAAATGTTTTGTCTGAAATGCCTGTTCCAACAATCATTAAAGAAGCACTTCCA
AAGTCTGGCAGGACAAGTCTTGGAGAGGACCTTTATAGGATCCTGAATGCGGAATCAACA
TCTGTGGAGGATATGCTCAATTTCCTTAATGTAAGATCTGAACACAATGCCCTTGAAGCT
GTTAACAGGTTGGAGGCTGCAATACTTGCATGGAAAGAGAAAGTAGCTGACCATGTCTGT
GGAAAATCTCCAGCTCGAACATCTTGGTCTTTCAAAAAAGATCCAATATCTGAACTGGAC
AAGATTGAGGTGTTATCAAGCAGAGCAGAAGCTCTTCTGCAGCAACTCATGAATAAATAC
CCAAACCTTCCTCGGACATTCCTCAATGTCACAAAGATCCAGTATGGCAAGGATATCGGG
TGTTCAATTCTTGAAGCATACTCTCGTGTTCTGTTGAACTTGGCATTCAGCATCCTGACT
AGGATAGGAGAGATTCTGCAAGAAGACATTTTGAGCAATCCCAATTCTCCCGCGGCTTCA
TGCCACCTTCCTGGCATAAGAATTGCAGGATTGACAGATAGTCCCATGGCTAGTCGTGTG
AGGCACTCGTTGATTGATCAGATGAATAAAACAGATGGACGTTGTTGTGATTCTCGTCGT
ACCAATGCTTCTGATATAGACATTGAGTTTGCTGAATCAAGGTTAAGTTCAGTAACTGCA
ACGCCAAGCCGAAGAGTGTGGTGCATAGGCAGAGAAGCTTGTAGCAGCATGTCTGCTGCA
AACTCACCTTGA