Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053643
CDS Infomation

pacid=37470657 polypeptide=PGSC0003DMP400036173 locus=PGSC0003DMG400020809 ID=PGSC0003DMT400053643.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTATTACAATGTATTTCTTTGCTTCTCTACTTTTCATACTTGTTATTCTCAAA
ATAAGAAGTAGCCATGCTGCTGCTTCTTCTTCTTCTTCAAAGCTTCCTCCAGGACCATGG
AAATTACCTATTATTGGAAACTTACATCAATTAGCAGCTGGTGGCCATTTAGTCCACAAA
GTCCTTAGAGACTTATCTAAAAAACATGGACCAATAATGCACATGCAACTTGGACATGTC
TCTACTATACTTGTTTCCACACCTGAAACTGCAAAACAAGTGATGAAAACTCATGACATA
GTCTTTGCATCAAGGTTTCAGCCTCTTGCTGCTAAGATTATTTCTTATGATTCCGCCAAC
ATAGGATTCGCTCCATATGGTGATTACTGGAGACAGATGCGTAAAATATGTGTACTTGAT
CTTCTAAGCACCAAGCGCGTTCAGTCCTTCCGGTCTCTTAGAGAAGAAGAATTCTCAGGT
CTTGCTAGATTATTGGCTAGCCATGCTGGATCCCCTGTTAATTTGACTCAATTGCTACAT
TCTACTATGTTGGCTTTCACTTCTAGGGCCGCAGTTGGGAAAAAGTTCAAAAACCAAGAG
AGGTTTATATCTATATTATGTGAACTTCTTAAAGTTGGGACTGGCTTTAATATTGCTGAT
TTTTACCCTTCAATCAAGTGGCTTCAACATATAACTGGTCTTAGGTCAAAATTGGAGAAG
CTTCATCATGAAGTAGATAGGCTACTTGATGAGATTATAGATGATCATATTGATGTTGAC
AACAACACCACAATTATGCATGAGGACCTTGTGGATGTCCTTTTAAGAGTACAAAATGAT
GGAAATTATGAAATAACTCGAAAAAACATTAAAGCAGTGATCTTGGACATGTTTGCAGCG
GGAACAGATACTTCAGCAACAACTGTTGAATGGACAATGGCAGAAATGCTCAAGAACCCA
AGTGTCTTAGAGAAAGCACAAGAAGAAGCCAGGAGAGTTTTTGGTGAAAAAGGTTATGTG
GATGAATCAAACTTTGATCAATTGAAATACTTAAAAGCAGTCATCAAAGAGACGCTAAGG
TTGCATCCACCTGCCCCTTTGTTACTCCCAAGGCTAAGTAGAGAAAAATGTAACATTGAT
GGTTATGAAATACCACACAAGACTCAAGTGTTGGTGAATGTTTGGACAATTGGAAGAGAC
TCAAGATATTGGGAGGATGCAGAGTGCTTTAAAGCAGAGAGATTTCTTGATAGTTCAATT
GATTTCAATGGGAATAATTTTGAGTACATACCATTTGGTGCAGGAAGAAGGATGTGTCCT
GGCATGTCATTTGGTCTAGCAAATGTAGAGCATCCATTGGCTCTTTTTCTATACCATTTT
GATTGGAAGCTACCCAATGGGATGAAACATGAAGAATTGGACATGAGTGAGGTGTATTTT
GGTGTGACAGTGAGAAGAAAACTAAATATGCATGTAATTCCTATAGTCTCTAAGCCTGTG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400036173
PEP Infomation

pacid=37470657 transcript=PGSC0003DMT400053643 locus=PGSC0003DMG400020809 ID=PGSC0003DMT400053643.v4.03 annot-version=v4.03
Sequence

MESITMYFFASLLFILVILKIRSSHAAASSSSSKLPPGPWKLPIIGNLHQLAAGGHLVHK
VLRDLSKKHGPIMHMQLGHVSTILVSTPETAKQVMKTHDIVFASRFQPLAAKIISYDSAN
IGFAPYGDYWRQMRKICVLDLLSTKRVQSFRSLREEEFSGLARLLASHAGSPVNLTQLLH
STMLAFTSRAAVGKKFKNQERFISILCELLKVGTGFNIADFYPSIKWLQHITGLRSKLEK
LHHEVDRLLDEIIDDHIDVDNNTTIMHEDLVDVLLRVQNDGNYEITRKNIKAVILDMFAA
GTDTSATTVEWTMAEMLKNPSVLEKAQEEARRVFGEKGYVDESNFDQLKYLKAVIKETLR
LHPPAPLLLPRLSREKCNIDGYEIPHKTQVLVNVWTIGRDSRYWEDAECFKAERFLDSSI
DFNGNNFEYIPFGAGRRMCPGMSFGLANVEHPLALFLYHFDWKLPNGMKHEELDMSEVYF
GVTVRRKLNMHVIPIVSKPV*

Transcript Sequence

Transcript ID

PGSC0003DMT400053643
Transcript Infomation

pacid=37470657 locus=PGSC0003DMG400020809 ID=PGSC0003DMT400053643.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTATTACAATGTATTTCTTTGCTTCTCTACTTTTCATACTTGTTATTCTCAAA
ATAAGAAGTAGCCATGCTGCTGCTTCTTCTTCTTCTTCAAAGCTTCCTCCAGGACCATGG
AAATTACCTATTATTGGAAACTTACATCAATTAGCAGCTGGTGGCCATTTAGTCCACAAA
GTCCTTAGAGACTTATCTAAAAAACATGGACCAATAATGCACATGCAACTTGGACATGTC
TCTACTATACTTGTTTCCACACCTGAAACTGCAAAACAAGTGATGAAAACTCATGACATA
GTCTTTGCATCAAGGTTTCAGCCTCTTGCTGCTAAGATTATTTCTTATGATTCCGCCAAC
ATAGGATTCGCTCCATATGGTGATTACTGGAGACAGATGCGTAAAATATGTGTACTTGAT
CTTCTAAGCACCAAGCGCGTTCAGTCCTTCCGGTCTCTTAGAGAAGAAGAATTCTCAGGT
CTTGCTAGATTATTGGCTAGCCATGCTGGATCCCCTGTTAATTTGACTCAATTGCTACAT
TCTACTATGTTGGCTTTCACTTCTAGGGCCGCAGTTGGGAAAAAGTTCAAAAACCAAGAG
AGGTTTATATCTATATTATGTGAACTTCTTAAAGTTGGGACTGGCTTTAATATTGCTGAT
TTTTACCCTTCAATCAAGTGGCTTCAACATATAACTGGTCTTAGGTCAAAATTGGAGAAG
CTTCATCATGAAGTAGATAGGCTACTTGATGAGATTATAGATGATCATATTGATGTTGAC
AACAACACCACAATTATGCATGAGGACCTTGTGGATGTCCTTTTAAGAGTACAAAATGAT
GGAAATTATGAAATAACTCGAAAAAACATTAAAGCAGTGATCTTGGACATGTTTGCAGCG
GGAACAGATACTTCAGCAACAACTGTTGAATGGACAATGGCAGAAATGCTCAAGAACCCA
AGTGTCTTAGAGAAAGCACAAGAAGAAGCCAGGAGAGTTTTTGGTGAAAAAGGTTATGTG
GATGAATCAAACTTTGATCAATTGAAATACTTAAAAGCAGTCATCAAAGAGACGCTAAGG
TTGCATCCACCTGCCCCTTTGTTACTCCCAAGGCTAAGTAGAGAAAAATGTAACATTGAT
GGTTATGAAATACCACACAAGACTCAAGTGTTGGTGAATGTTTGGACAATTGGAAGAGAC
TCAAGATATTGGGAGGATGCAGAGTGCTTTAAAGCAGAGAGATTTCTTGATAGTTCAATT
GATTTCAATGGGAATAATTTTGAGTACATACCATTTGGTGCAGGAAGAAGGATGTGTCCT
GGCATGTCATTTGGTCTAGCAAATGTAGAGCATCCATTGGCTCTTTTTCTATACCATTTT
GATTGGAAGCTACCCAATGGGATGAAACATGAAGAATTGGACATGAGTGAGGTGTATTTT
GGTGTGACAGTGAGAAGAAAACTAAATATGCATGTAATTCCTATAGTCTCTAAGCCTGTG
TAA