Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053639
CDS Infomation

pacid=37456453 polypeptide=PGSC0003DMP400036170 locus=PGSC0003DMG400020807 ID=PGSC0003DMT400053639.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAGAGTACTTCATGAATGGCGGAATCCCTAATCCAGCCCTTCAGTTTGAACCT
ACTATGGCATTCCCTTCATGGAATCCCTTACATTCAGGGCAATCTTCTGATTGCTTATTT
AACCCCAACTGGGATCATTCAACAGCTCAATTTAACCAATTTGACTCAACTTTGAACTCA
ATTGTATCTTCTTCCCCTGCTGAGTTGGTTGGGAAACGTTCCCCTCAACCGGTATTCAAT
AATTTGCACAATAACAGTAACAATTCGTGTTATAGTACACCTGTAAACTCTCCACCGAAA
CTACACATACCCATGATGGGAAAAGATAATATACCCAATTTGGGAAGTTCACTTCCTCCT
CCATTGCCTGCTGATCCAAGTTTTGCTCAAAGAGCTGCTAAATTTTCTTGTTTTGGGAGC
AGTAGTTTCAACGGCAGAACGAGTCCGTTGGGGTTGAACAATACGGAATTATCACATAGA
TCTGCTCAACCATTGGGGAATGGAAAGTTGCCTAGAGTTTCGAGTAGCCCTTCTCTCAAG
CAAGGTGGATCCCCTTTGCAAATCAAGAATTCGGGTCAAACCCGGATGGAAATGATGGCC
AATAACTCTAATGAGTCTGCTTCAGAGCCAAGTGGGGAAACAGGGTCAAAACTTCCAACT
GAATTGAATTCTAGTTCTAGAAAAAGAAAAACAGTTTCTAGAGGAAAAACAAAGGAAGAT
TCTCCAACTCAAGGAGCTAATGGAAACAGGGGAGGTGAAGCTGATGATAATGCAAGAGCA
AAGCGATGTAAACAAGTAGAAAGTACTGGGATAGAAGTTAACATGGAGGAATCAAAGGAT
GATGAAACCCAAAAACAAGTTATGGAAAATCAAAAGCCTCCTGAACCACCAAAGGACTAT
ATTCATGTTAGGGCAAGGAGAGGACAAGCTACTGATAGCCATAGTCTAGCAGAAAGAGTG
AGACGAGAGAAGATTAGTGAAAGAATGAAGCTGTTACAAGATCTTGTACCAGGCTGTAAT
AAGGTGACAGGAAAAGCACTAATGCTTGATGAAATTATAAATTATGTACAGTCACTCCAA
CGACAAGTCGAGTTCCTATCCATGAAGTTGGCAACAGTGAACCCAAATTTGGATTATCCC
CTTTCCAAGGATATATGTCAACCAAATGGCTCTCTGCCCCATCCTGTTTTCCCAGTAGAT
AAAACATCATCTTCTTACCAACAAGGCCGGAGCGATATTCCTAATGGGGCACTAAGTCGA
TGCTCAGTGGACACGTTAGATAACTCACTATGCCGCAGCCTAGGACTGCAATTGCCTCCC
CTTGATGGATTTGCTGAATATCTTAATCAGTTCCCTGCAATATGCGAGGATGACCTGCAA
AGCTTTGTGCAGATGGGATTTAGCCAAAACCCCAACAAGGATATGACACTGCAATCACAA
GGGCCTCATCAAACGTCTCACATGAAAATTGAGATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036170
PEP Infomation

pacid=37456453 transcript=PGSC0003DMT400053639 locus=PGSC0003DMG400020807 ID=PGSC0003DMT400053639.v4.03 annot-version=v4.03
Sequence

MEKEYFMNGGIPNPALQFEPTMAFPSWNPLHSGQSSDCLFNPNWDHSTAQFNQFDSTLNS
IVSSSPAELVGKRSPQPVFNNLHNNSNNSCYSTPVNSPPKLHIPMMGKDNIPNLGSSLPP
PLPADPSFAQRAAKFSCFGSSSFNGRTSPLGLNNTELSHRSAQPLGNGKLPRVSSSPSLK
QGGSPLQIKNSGQTRMEMMANNSNESASEPSGETGSKLPTELNSSSRKRKTVSRGKTKED
SPTQGANGNRGGEADDNARAKRCKQVESTGIEVNMEESKDDETQKQVMENQKPPEPPKDY
IHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ
RQVEFLSMKLATVNPNLDYPLSKDICQPNGSLPHPVFPVDKTSSSYQQGRSDIPNGALSR
CSVDTLDNSLCRSLGLQLPPLDGFAEYLNQFPAICEDDLQSFVQMGFSQNPNKDMTLQSQ
GPHQTSHMKIEM*

Transcript Sequence

Transcript ID

PGSC0003DMT400053639
Transcript Infomation

pacid=37456453 locus=PGSC0003DMG400020807 ID=PGSC0003DMT400053639.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAGAGTACTTCATGAATGGCGGAATCCCTAATCCAGCCCTTCAGTTTGAACCT
ACTATGGCATTCCCTTCATGGAATCCCTTACATTCAGGGCAATCTTCTGATTGCTTATTT
AACCCCAACTGGGATCATTCAACAGCTCAATTTAACCAATTTGACTCAACTTTGAACTCA
ATTGTATCTTCTTCCCCTGCTGAGTTGGTTGGGAAACGTTCCCCTCAACCGGTATTCAAT
AATTTGCACAATAACAGTAACAATTCGTGTTATAGTACACCTGTAAACTCTCCACCGAAA
CTACACATACCCATGATGGGAAAAGATAATATACCCAATTTGGGAAGTTCACTTCCTCCT
CCATTGCCTGCTGATCCAAGTTTTGCTCAAAGAGCTGCTAAATTTTCTTGTTTTGGGAGC
AGTAGTTTCAACGGCAGAACGAGTCCGTTGGGGTTGAACAATACGGAATTATCACATAGA
TCTGCTCAACCATTGGGGAATGGAAAGTTGCCTAGAGTTTCGAGTAGCCCTTCTCTCAAG
CAAGGTGGATCCCCTTTGCAAATCAAGAATTCGGGTCAAACCCGGATGGAAATGATGGCC
AATAACTCTAATGAGTCTGCTTCAGAGCCAAGTGGGGAAACAGGGTCAAAACTTCCAACT
GAATTGAATTCTAGTTCTAGAAAAAGAAAAACAGTTTCTAGAGGAAAAACAAAGGAAGAT
TCTCCAACTCAAGGAGCTAATGGAAACAGGGGAGGTGAAGCTGATGATAATGCAAGAGCA
AAGCGATGTAAACAAGTAGAAAGTACTGGGATAGAAGTTAACATGGAGGAATCAAAGGAT
GATGAAACCCAAAAACAAGTTATGGAAAATCAAAAGCCTCCTGAACCACCAAAGGACTAT
ATTCATGTTAGGGCAAGGAGAGGACAAGCTACTGATAGCCATAGTCTAGCAGAAAGAGTG
AGACGAGAGAAGATTAGTGAAAGAATGAAGCTGTTACAAGATCTTGTACCAGGCTGTAAT
AAGGTGACAGGAAAAGCACTAATGCTTGATGAAATTATAAATTATGTACAGTCACTCCAA
CGACAAGTCGAGTTCCTATCCATGAAGTTGGCAACAGTGAACCCAAATTTGGATTATCCC
CTTTCCAAGGATATATGTCAACCAAATGGCTCTCTGCCCCATCCTGTTTTCCCAGTAGAT
AAAACATCATCTTCTTACCAACAAGGCCGGAGCGATATTCCTAATGGGGCACTAAGTCGA
TGCTCAGTGGACACGTTAGATAACTCACTATGCCGCAGCCTAGGACTGCAATTGCCTCCC
CTTGATGGATTTGCTGAATATCTTAATCAGTTCCCTGCAATATGCGAGGATGACCTGCAA
AGCTTTGTGCAGATGGGATTTAGCCAAAACCCCAACAAGGATATGACACTGCAATCACAA
GGGCCTCATCAAACGTCTCACATGAAAATTGAGATGTAG