Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053625
CDS Infomation

pacid=37458152 polypeptide=PGSC0003DMP400036165 locus=PGSC0003DMG400020802 ID=PGSC0003DMT400053625.v4.03 annot-version=v4.03
Sequence

ATGGATGATGATTTTGATATTCCGGGGGCAGAAGGAATGGATGATGACATGGATCTGCCG
GACGAAAGTCCGATCATGAAAGTCGGCGAAGAGAAGGAGATCGGAAAAGAAGGTTTGAAG
AAGAAGCTTGTTAAAGAAGGCGAAGGATGGGACACTCCTGAAGCTGGAGATGAAGTAGAA
GTTCATTATACTGGCACTCTGCTTGATGGGACCAAGTTCGATTCCAGTCGCGATAGGGGC
ACTCCTTTCAAGTTCACTCTCGGTCAAGGACAAGTAATTAAGGGATGGGATCAAGGTATT
AAGACAATGAAAAAGGCTGAAAATGCCATTTTCACCATTCCTCCAGAGCTGGCTTATGGA
GAGTCTGGTTCTCCTCCAACTATCCCTCCAAATTCCACTCTCCAGTTTGATGTTGAATTG
CTATCATGGGTGAGTGTAAAGGACATCTGCAAGGATGGTGGTATCTTCAAGAAGATCCTC
ACCAAGGGAGAGAAATGGGAAAATCCCATGGATCTTGACGAAGTTCTAGTCAAGTATGAA
GCTCAGCTTGAAGATGGATCATTGGTTGGAAAATCAGATGGAGTGGAGTTCACTGTTCAA
GAAGGACACTTCTGCCCTGCTATTGCGAAAGCTGTGAAAACTATGAAGAAAGGTGAAAAA
GTCCAGTTGACGGTCAAGCCACAGTATGGCTTTGGGGAGAAAGGAAAACCAGCCTCAGGT
GATGGAGGAGCGGTCCCACCTAATGCTACACTGCAAATTAGCTTGGAGTTGGTAACATGG
AAGACTGTCTCAAGTGTAACTGACGATAAGAAAGTAATAAAGAAGATCTTAAAAGAAGGG
GAAGGATTCGAGAAACCGAATGCAGGGGCTGTGGTTAAAATGAAATTGATCGGCAAGCTA
CAAGATGGCACAGTCTTCATAAAGAAGGGCCACAATGGAGAAAATGAAGATGAGCTTTTC
GAGTTTAAGACAGATGAGGAGCAAGTTATAGATGGGCTGGATAGAGCTGTCATGTCAATG
AAGAAGGGTGAAGTGGCACTGCTAATAATTGCACCTGATTATGCCTTTGGTCCATCTGAA
TCAAAGCAAGACTTAGGCGTTGTTCCGCCCAACTCAACTGTATATTATGAGGTTGAGCTG
GTTTCTTTTGTCAAGGAAAAGGAATCATGGGATATGAATACCCAGGAGAAAATTGAGGCT
GCTGTCAAAAAGAAAGAGGAAGGAAATGCTCTCTTCAAGGCTGGTAAATATGCAAGAGCA
TCAACTAGATATGAGAAGGCTGCTAAATTTATTGAAGATGATACTGACTTTAGTGAAGAG
GAAAAGAAACAAGCTAAAGCTTTGAAGATCAGCTGCAACTTAAATAATGCAGCTTGCAAG
TTGAAACTGAAAGATTACAAGCAGGCGGAGAAGCTGTGTACCAAGGTGTTGGAAACTGAG
AGTACTAATGTTAAAGCTCTTTACCGGAGAGCTCAAGCATATATGAACATGACAGATCTT
GATCTAGCTGAATTTGACATAAAGAAAGCCCTTGAGATTGATCCTAACAACAGGGATGTG
AAGCTTGAATACAAAGCTCTGAAGGAGAAAGTTAAGGAATTCAATAAGAAGGATGCAAAA
TTCTATGGGAACATGTTTGCTAGGTTAAATAAGTTGGATGCCAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036165
PEP Infomation

pacid=37458152 transcript=PGSC0003DMT400053625 locus=PGSC0003DMG400020802 ID=PGSC0003DMT400053625.v4.03 annot-version=v4.03
Sequence

MDDDFDIPGAEGMDDDMDLPDESPIMKVGEEKEIGKEGLKKKLVKEGEGWDTPEAGDEVE
VHYTGTLLDGTKFDSSRDRGTPFKFTLGQGQVIKGWDQGIKTMKKAENAIFTIPPELAYG
ESGSPPTIPPNSTLQFDVELLSWVSVKDICKDGGIFKKILTKGEKWENPMDLDEVLVKYE
AQLEDGSLVGKSDGVEFTVQEGHFCPAIAKAVKTMKKGEKVQLTVKPQYGFGEKGKPASG
DGGAVPPNATLQISLELVTWKTVSSVTDDKKVIKKILKEGEGFEKPNAGAVVKMKLIGKL
QDGTVFIKKGHNGENEDELFEFKTDEEQVIDGLDRAVMSMKKGEVALLIIAPDYAFGPSE
SKQDLGVVPPNSTVYYEVELVSFVKEKESWDMNTQEKIEAAVKKKEEGNALFKAGKYARA
STRYEKAAKFIEDDTDFSEEEKKQAKALKISCNLNNAACKLKLKDYKQAEKLCTKVLETE
STNVKALYRRAQAYMNMTDLDLAEFDIKKALEIDPNNRDVKLEYKALKEKVKEFNKKDAK
FYGNMFARLNKLDAN*

Transcript Sequence

Transcript ID

PGSC0003DMT400053625
Transcript Infomation

pacid=37458152 locus=PGSC0003DMG400020802 ID=PGSC0003DMT400053625.v4.03 annot-version=v4.03
Sequence

ATGGATGATGATTTTGATATTCCGGGGGCAGAAGGAATGGATGATGACATGGATCTGCCG
GACGAAAGTCCGATCATGAAAGTCGGCGAAGAGAAGGAGATCGGAAAAGAAGGTTTGAAG
AAGAAGCTTGTTAAAGAAGGCGAAGGATGGGACACTCCTGAAGCTGGAGATGAAGTAGAA
GTTCATTATACTGGCACTCTGCTTGATGGGACCAAGTTCGATTCCAGTCGCGATAGGGGC
ACTCCTTTCAAGTTCACTCTCGGTCAAGGACAAGTAATTAAGGGATGGGATCAAGGTATT
AAGACAATGAAAAAGGCTGAAAATGCCATTTTCACCATTCCTCCAGAGCTGGCTTATGGA
GAGTCTGGTTCTCCTCCAACTATCCCTCCAAATTCCACTCTCCAGTTTGATGTTGAATTG
CTATCATGGGTGAGTGTAAAGGACATCTGCAAGGATGGTGGTATCTTCAAGAAGATCCTC
ACCAAGGGAGAGAAATGGGAAAATCCCATGGATCTTGACGAAGTTCTAGTCAAGTATGAA
GCTCAGCTTGAAGATGGATCATTGGTTGGAAAATCAGATGGAGTGGAGTTCACTGTTCAA
GAAGGACACTTCTGCCCTGCTATTGCGAAAGCTGTGAAAACTATGAAGAAAGGTGAAAAA
GTCCAGTTGACGGTCAAGCCACAGTATGGCTTTGGGGAGAAAGGAAAACCAGCCTCAGGT
GATGGAGGAGCGGTCCCACCTAATGCTACACTGCAAATTAGCTTGGAGTTGGTAACATGG
AAGACTGTCTCAAGTGTAACTGACGATAAGAAAGTAATAAAGAAGATCTTAAAAGAAGGG
GAAGGATTCGAGAAACCGAATGCAGGGGCTGTGGTTAAAATGAAATTGATCGGCAAGCTA
CAAGATGGCACAGTCTTCATAAAGAAGGGCCACAATGGAGAAAATGAAGATGAGCTTTTC
GAGTTTAAGACAGATGAGGAGCAAGTTATAGATGGGCTGGATAGAGCTGTCATGTCAATG
AAGAAGGGTGAAGTGGCACTGCTAATAATTGCACCTGATTATGCCTTTGGTCCATCTGAA
TCAAAGCAAGACTTAGGCGTTGTTCCGCCCAACTCAACTGTATATTATGAGGTTGAGCTG
GTTTCTTTTGTCAAGGAAAAGGAATCATGGGATATGAATACCCAGGAGAAAATTGAGGCT
GCTGTCAAAAAGAAAGAGGAAGGAAATGCTCTCTTCAAGGCTGGTAAATATGCAAGAGCA
TCAACTAGATATGAGAAGGCTGCTAAATTTATTGAAGATGATACTGACTTTAGTGAAGAG
GAAAAGAAACAAGCTAAAGCTTTGAAGATCAGCTGCAACTTAAATAATGCAGCTTGCAAG
TTGAAACTGAAAGATTACAAGCAGGCGGAGAAGCTGTGTACCAAGGTGTTGGAAACTGAG
AGTACTAATGTTAAAGCTCTTTACCGGAGAGCTCAAGCATATATGAACATGACAGATCTT
GATCTAGCTGAATTTGACATAAAGAAAGCCCTTGAGATTGATCCTAACAACAGGGATGTG
AAGCTTGAATACAAAGCTCTGAAGGAGAAAGTTAAGGAATTCAATAAGAAGGATGCAAAA
TTCTATGGGAACATGTTTGCTAGGTTAAATAAGTTGGATGCCAACTAG