Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053577
CDS Infomation

pacid=37469019 polypeptide=PGSC0003DMP400036127 locus=PGSC0003DMG400020785 ID=PGSC0003DMT400053577.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTGCTTCCACAACTCTGGGCATTTCCATTAGACTTGGATGTTCCAGCAATGAA
CATCTCCTTTTGGGTCAGCCCAGAAGTAGAACTAACATCGCCTTGCCATTTCATTCTTCT
TCCTCTCGTCTTGTTACTTTCTCTCGCCGTCGAAACAATTCTGCTATCACTTCTTCCAAC
AAAAAGAAAAAGAGTTCACCTAGGAAAGATACGGAGGAAGTTGATGATATAGATGAAGAT
GCTTTTGAGGCACTCTTTCAGCTGCTGGAAGAAGATCTGAAAAATGATGAACTATCCTTG
GACGATGATGATATAACTGAGGAGGACCTCGCGAAACTTGAACGTGAATTGGAGGAAGCA
CTGAAGGATGATGAACTACTAGGAGAAATTGACTCAATTGCCAATGAGAACATTGAAAGT
AGTAAGGCTGAAGATGAAGAAGCAGTAGCAGAAGATGCCAATGAAGATGATGAAGATGAA
GATATGCTAGTGAAATTGAAAAATTGGCAACTTAAGAAACTGGCATATGCCTTGAGAAAG
GGACGGCGTAAGTTAAATATAAAAAATCTTGCTGCTGACCTATGCCTTGATAGAGCTGTT
GTTCTTGAAATGCTTCGCAATCCTCCACCAAATCTTGTGTTGCTGAGTGCTGCCTTACCT
GATGAACCTGTCCCCAGAATGTTAGAGCCTGAAAGCAAACCCCTGGAGACTGTTCCCATC
GAGATGAGTGATGCTGCGAAGCCAGATGCTAAGGTGGAAACGCCAGTTCATGTGATGCAA
AGTAACTGGTCTGCTCAAAAGAGACTAAAGAAAGTCCAATTGGAAACCCTTGAACAAGTT
TATAGACGATCGAAGCGGCCCACTAATGCCATGATTAGCAGCATTGTGCATGTGACAAAT
GTGCCTCGGAAAAGAGTTCTGAAATGGTTTGAAGACAGACGGTCTGAAGAAGGGGTTCCT
GCTCATCGACTTCCATACCAACCATCATCTATATCTGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400036127
PEP Infomation

pacid=37469019 transcript=PGSC0003DMT400053577 locus=PGSC0003DMG400020785 ID=PGSC0003DMT400053577.v4.03 annot-version=v4.03
Sequence

MASASTTLGISIRLGCSSNEHLLLGQPRSRTNIALPFHSSSSRLVTFSRRRNNSAITSSN
KKKKSSPRKDTEEVDDIDEDAFEALFQLLEEDLKNDELSLDDDDITEEDLAKLERELEEA
LKDDELLGEIDSIANENIESSKAEDEEAVAEDANEDDEDEDMLVKLKNWQLKKLAYALRK
GRRKLNIKNLAADLCLDRAVVLEMLRNPPPNLVLLSAALPDEPVPRMLEPESKPLETVPI
EMSDAAKPDAKVETPVHVMQSNWSAQKRLKKVQLETLEQVYRRSKRPTNAMISSIVHVTN
VPRKRVLKWFEDRRSEEGVPAHRLPYQPSSISE*

Transcript Sequence

Transcript ID

PGSC0003DMT400053577
Transcript Infomation

pacid=37469019 locus=PGSC0003DMG400020785 ID=PGSC0003DMT400053577.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTGCTTCCACAACTCTGGGCATTTCCATTAGACTTGGATGTTCCAGCAATGAA
CATCTCCTTTTGGGTCAGCCCAGAAGTAGAACTAACATCGCCTTGCCATTTCATTCTTCT
TCCTCTCGTCTTGTTACTTTCTCTCGCCGTCGAAACAATTCTGCTATCACTTCTTCCAAC
AAAAAGAAAAAGAGTTCACCTAGGAAAGATACGGAGGAAGTTGATGATATAGATGAAGAT
GCTTTTGAGGCACTCTTTCAGCTGCTGGAAGAAGATCTGAAAAATGATGAACTATCCTTG
GACGATGATGATATAACTGAGGAGGACCTCGCGAAACTTGAACGTGAATTGGAGGAAGCA
CTGAAGGATGATGAACTACTAGGAGAAATTGACTCAATTGCCAATGAGAACATTGAAAGT
AGTAAGGCTGAAGATGAAGAAGCAGTAGCAGAAGATGCCAATGAAGATGATGAAGATGAA
GATATGCTAGTGAAATTGAAAAATTGGCAACTTAAGAAACTGGCATATGCCTTGAGAAAG
GGACGGCGTAAGTTAAATATAAAAAATCTTGCTGCTGACCTATGCCTTGATAGAGCTGTT
GTTCTTGAAATGCTTCGCAATCCTCCACCAAATCTTGTGTTGCTGAGTGCTGCCTTACCT
GATGAACCTGTCCCCAGAATGTTAGAGCCTGAAAGCAAACCCCTGGAGACTGTTCCCATC
GAGATGAGTGATGCTGCGAAGCCAGATGCTAAGGTGGAAACGCCAGTTCATGTGATGCAA
AGTAACTGGTCTGCTCAAAAGAGACTAAAGAAAGTCCAATTGGAAACCCTTGAACAAGTT
TATAGACGATCGAAGCGGCCCACTAATGCCATGATTAGCAGCATTGTGCATGTGACAAAT
GTGCCTCGGAAAAGAGTTCTGAAATGGTTTGAAGACAGACGGTCTGAAGAAGGGGTTCCT
GCTCATCGACTTCCATACCAACCATCATCTATATCTGAATAG