Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053416
CDS Infomation

pacid=37438324 polypeptide=PGSC0003DMP400036041 locus=PGSC0003DMG401020721 ID=PGSC0003DMT400053416.v4.03 annot-version=v4.03
Sequence

ATGGAGCAAGCTAAATTTTCTTACCATGTTTTCTTGAGTTTCAATGCCCATGATACTGGC
AAAACTTTTACTGATCATCTCCATAGAAATTTGTTTCGAGCTGGGTTTCATGTGTTCAAG
TGTGAAGATGATGATGAAGAAGAAGACAAAATAGATGAGTTGAAGTTAAAATTGAAAAAG
GGAATCGAGCAATCGAAGATGTCAGTTATTGTTTTGTCCCAAAACTACGCATCATCGGAA
AGGTGTCTTTACGAGCTTGTCGTGATTTTGGAGCAAAGGAGGAACTCTGGGCATATAGTC
TTACCTGTCTTCTTTAACGTGGATCCTTCAGATGTAAGGAAGCAAAAGGGAAGTTTTGGG
AAAGAAAATTTCCAGATTGTCAATGGTGAGAGTCACAAGTTAAGAGATTGGAGAAATGCT
CTCAAAGAAGTGGCAGATTTGGGAGGAATGCCCTTGCAAAATCAAGCTGATGGACATGAG
GCAAAGTTCATTGAGAATATTGTTGAAGTGGTTGCAAACAAGCTACGTCCCAGAGACTTA
CACAGTGCTCCTTACCTCATTGATATCAATTATCGGGCTGAAGATATTATCTCCTGGTTA
CAAGATAGATCAACTAATGTTGGGCTATATGTGATTTGTGGGATTGGTGGAATTGGGAAG
ACAACCATTGCCAAATTTGCCTATAACTCAAGTGCAAGATCATTCGAAGGAAGCAGTTTC
CTTGCGAACTTCAATGAAATTGCGAAACAATGTAATGGCTTAGTTCGTTTGCAGAAGCAA
GTTCTGTATGATATTGTTGGGAGAAAGGAGAGGATATCGAATGTTGATGAAGGAATTATG
ATGATTGAAGATGCCGTAGGCTATAAAAAAGTTCTTCTTGTTCTTGATGATGTTGATGAT
GCTGACCAGATAGATACAATTTTAGGAATGACAGATTGGCTTAATCCTGCTAGTAAAATC
ATTATAACAACGAGGCATGAGTCATTGCTAAGGCCTTCTGTACCTCACAAGGTGCTTAAA
CTAGAAGTTTTGAATAAAATGGATTCCCTAAAGCTTTTTAGCTGGCATGCCTTTGGGGAA
GATCATCCTTGGGAAGGTTATCTTGAGCTCTCAGAAAGAGTGGTTCTTCAATGTGTTGGA
CTTCCTTTAGCTCTTCGTGTTTTAGGCTCAGCTCTATCGGGTAGAAGACCAGAAATATGG
GGAAGTGCACTAGAAAAGCTGGAAACAATCCCTGATGGTCATGTCATTGAAAAACTTAAA
CTGAGTTTTGACACTCTTGAAGATGACCATGACAAAGATATATTCCTTCATATAGCTCAT
TTCTTTCTTGGGATGGACAGAGATGACTCTGTTAGAATACTGGATGGATGTGGTTTCCAC
ACAATAATTGGGATGCAAAACCTCATTGATAGAAGTCTTTTGACAATCAGTGACTTAAAT
AAGTTGGAGATGCATCGGTTGCTTAGAGACCTGGGGAGAAATATTGTTCGTATGGAATCA
CTGGATCCTGGAAAACGTAGTAGACTTTGGAATAACAAGAATTCTTTCAGAGTATTGAAT
TATAAGACTGGCACTGAAAAGATTGAAGGGATCAGCCTTGACATGCCCATATTGATGGAA
GATAAATCAGCCAACCATTCAATAGACACTTCATCAAGCAACTCAAATTACAGCCTAGGG
ACTGATGCATTTACGGTTATGCGAAACCTAAGGGTGCTCAAACTAAATGATGTGAACCTT
ATTGGATGCTTCAAAGAATTTCCCAAGAGATTAAAATGGCTGTCTTGGCGTAAATGCCCT
TTAAAATCCATTACTAGTGACCTTTCCTTGGAAGGACTAGTATCTATTGACATGCGATAC
AGCAGTTTACAACAAACATGGAGTGGAACCGAGGTTTTGAGATTTCTCAAGATTCTCAAC
CTTAGTCATTCTTGGGAACTTACCAGAACCCCTAGCTTCGCTGGAATGCCCCGGCTGGAG
AAATTAATTCTTAAAGGCTGTGTTAAACTGGTTGATATTGATGAATCTATTGGTTATCTC
CAAGAAATCGCCCTACTGAATCTAAAATACTGCAAGAGCATCAGAAAGCTGCCAAGAAAT
ATTGGTAAACTTGAAAGTCTTAAAACACTTGATATATCCTTCTGCTCAAGTCTGGAGTCG
CTGCCAATGGAGCTTAACATGATAGATTCTTTGAAAGTGCTAAGAGCTGATGGAATTGGT
CTAAACCAAATAGTCTGTAACACCAATGAGCAGAAATCATTACAGGCACTATTTTCATCT
TGGATATCAAAGCCAAGAATCTCTCCTGAAATATCATGGGCCTTTTTACCAAGCTCTTTG
ATGAGCTTGAGCCTTGTGGGTTGCAGGCTGTCTGATGGATCTTTTCCCAAGAAGTTTAGC
AATCTTCCGCTGCTCGAAGAACTGGATCTAAGTGAAAACTCAATTAGTTGCCTCCCAGAG
TGGATCAAGAGTCTCCCTCAGCTCCAGAGCCTCAGTGTCAAGTCTTGTAAGATGCTCAAA
TCACTTACTGAGATGCCAAATAGCATTTCAGAATTGTCAATACATAGTTGCTCATCGTTG
GAGATAGTGACATACCAATCATTGCTATTGGAATATCCAAGCCTGGTTCACGATTACAAT
TGTGACAGTCTAGTCATGATGCAGGGAGATTTTAAGTTAGAAGCTCTAGAAAATGCTGAC
CCGCAGATGCTTAAACGTTTTGGTCTGAATCCTGAAACTGTGGAAAATACTATGGTGAAA
ATGGACCTCTTTTCAAGTTACAAGATAAAAATGCTTCCGCCACAGGGCTTGTACGAGCAA
GGCATCTTCAGTACATTTCTTCCTGGAAATAAGATACCTAGCTGGTTCACGAAGTTAGAG
AATGTGAATGCAGTAAAATTTAACATATCTCAACCTCTCAAAAATATCCAAGGCCTATCC
ATAGCAGTTGTGTATACAAGTTCTGAAAGTGCAGAGAATGAGTTTTCAAGAGCCTACTGG
CGAAAACAGGAGAATATTGTACAGAATAGGACTAAAGATTTGAAGTGGATGCACTATCCA
AGAGTTTTCGGCGTGCCAGAAGGTAATGAAGAAATAACATGGTTAAGTCACTGGAAATTT
GGAGATATGCTACAAGATGGAGATGAAATTTCTATTTTAGTCCGTTTGAATGGGTTGAGG
GTAAAAGAACTTGGCATCGACATTTTGTGTGAGGAGCTGTCAAACTGCAAAGTTGCAAGC
CCAGTTCCCTTGTTTTCGAATGATAACGTTCCTGGAGATGTATCACAACGTGGTAGTGTT
TTTAAAATAGGGAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400036041
PEP Infomation

pacid=37438324 transcript=PGSC0003DMT400053416 locus=PGSC0003DMG401020721 ID=PGSC0003DMT400053416.v4.03 annot-version=v4.03
Sequence

MEQAKFSYHVFLSFNAHDTGKTFTDHLHRNLFRAGFHVFKCEDDDEEEDKIDELKLKLKK
GIEQSKMSVIVLSQNYASSERCLYELVVILEQRRNSGHIVLPVFFNVDPSDVRKQKGSFG
KENFQIVNGESHKLRDWRNALKEVADLGGMPLQNQADGHEAKFIENIVEVVANKLRPRDL
HSAPYLIDINYRAEDIISWLQDRSTNVGLYVICGIGGIGKTTIAKFAYNSSARSFEGSSF
LANFNEIAKQCNGLVRLQKQVLYDIVGRKERISNVDEGIMMIEDAVGYKKVLLVLDDVDD
ADQIDTILGMTDWLNPASKIIITTRHESLLRPSVPHKVLKLEVLNKMDSLKLFSWHAFGE
DHPWEGYLELSERVVLQCVGLPLALRVLGSALSGRRPEIWGSALEKLETIPDGHVIEKLK
LSFDTLEDDHDKDIFLHIAHFFLGMDRDDSVRILDGCGFHTIIGMQNLIDRSLLTISDLN
KLEMHRLLRDLGRNIVRMESLDPGKRSRLWNNKNSFRVLNYKTGTEKIEGISLDMPILME
DKSANHSIDTSSSNSNYSLGTDAFTVMRNLRVLKLNDVNLIGCFKEFPKRLKWLSWRKCP
LKSITSDLSLEGLVSIDMRYSSLQQTWSGTEVLRFLKILNLSHSWELTRTPSFAGMPRLE
KLILKGCVKLVDIDESIGYLQEIALLNLKYCKSIRKLPRNIGKLESLKTLDISFCSSLES
LPMELNMIDSLKVLRADGIGLNQIVCNTNEQKSLQALFSSWISKPRISPEISWAFLPSSL
MSLSLVGCRLSDGSFPKKFSNLPLLEELDLSENSISCLPEWIKSLPQLQSLSVKSCKMLK
SLTEMPNSISELSIHSCSSLEIVTYQSLLLEYPSLVHDYNCDSLVMMQGDFKLEALENAD
PQMLKRFGLNPETVENTMVKMDLFSSYKIKMLPPQGLYEQGIFSTFLPGNKIPSWFTKLE
NVNAVKFNISQPLKNIQGLSIAVVYTSSESAENEFSRAYWRKQENIVQNRTKDLKWMHYP
RVFGVPEGNEEITWLSHWKFGDMLQDGDEISILVRLNGLRVKELGIDILCEELSNCKVAS
PVPLFSNDNVPGDVSQRGSVFKIGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400053416
Transcript Infomation

pacid=37438324 locus=PGSC0003DMG401020721 ID=PGSC0003DMT400053416.v4.03 annot-version=v4.03
Sequence

ATGGAGCAAGCTAAATTTTCTTACCATGTTTTCTTGAGTTTCAATGCCCATGATACTGGC
AAAACTTTTACTGATCATCTCCATAGAAATTTGTTTCGAGCTGGGTTTCATGTGTTCAAG
TGTGAAGATGATGATGAAGAAGAAGACAAAATAGATGAGTTGAAGTTAAAATTGAAAAAG
GGAATCGAGCAATCGAAGATGTCAGTTATTGTTTTGTCCCAAAACTACGCATCATCGGAA
AGGTGTCTTTACGAGCTTGTCGTGATTTTGGAGCAAAGGAGGAACTCTGGGCATATAGTC
TTACCTGTCTTCTTTAACGTGGATCCTTCAGATGTAAGGAAGCAAAAGGGAAGTTTTGGG
AAAGAAAATTTCCAGATTGTCAATGGTGAGAGTCACAAGTTAAGAGATTGGAGAAATGCT
CTCAAAGAAGTGGCAGATTTGGGAGGAATGCCCTTGCAAAATCAAGCTGATGGACATGAG
GCAAAGTTCATTGAGAATATTGTTGAAGTGGTTGCAAACAAGCTACGTCCCAGAGACTTA
CACAGTGCTCCTTACCTCATTGATATCAATTATCGGGCTGAAGATATTATCTCCTGGTTA
CAAGATAGATCAACTAATGTTGGGCTATATGTGATTTGTGGGATTGGTGGAATTGGGAAG
ACAACCATTGCCAAATTTGCCTATAACTCAAGTGCAAGATCATTCGAAGGAAGCAGTTTC
CTTGCGAACTTCAATGAAATTGCGAAACAATGTAATGGCTTAGTTCGTTTGCAGAAGCAA
GTTCTGTATGATATTGTTGGGAGAAAGGAGAGGATATCGAATGTTGATGAAGGAATTATG
ATGATTGAAGATGCCGTAGGCTATAAAAAAGTTCTTCTTGTTCTTGATGATGTTGATGAT
GCTGACCAGATAGATACAATTTTAGGAATGACAGATTGGCTTAATCCTGCTAGTAAAATC
ATTATAACAACGAGGCATGAGTCATTGCTAAGGCCTTCTGTACCTCACAAGGTGCTTAAA
CTAGAAGTTTTGAATAAAATGGATTCCCTAAAGCTTTTTAGCTGGCATGCCTTTGGGGAA
GATCATCCTTGGGAAGGTTATCTTGAGCTCTCAGAAAGAGTGGTTCTTCAATGTGTTGGA
CTTCCTTTAGCTCTTCGTGTTTTAGGCTCAGCTCTATCGGGTAGAAGACCAGAAATATGG
GGAAGTGCACTAGAAAAGCTGGAAACAATCCCTGATGGTCATGTCATTGAAAAACTTAAA
CTGAGTTTTGACACTCTTGAAGATGACCATGACAAAGATATATTCCTTCATATAGCTCAT
TTCTTTCTTGGGATGGACAGAGATGACTCTGTTAGAATACTGGATGGATGTGGTTTCCAC
ACAATAATTGGGATGCAAAACCTCATTGATAGAAGTCTTTTGACAATCAGTGACTTAAAT
AAGTTGGAGATGCATCGGTTGCTTAGAGACCTGGGGAGAAATATTGTTCGTATGGAATCA
CTGGATCCTGGAAAACGTAGTAGACTTTGGAATAACAAGAATTCTTTCAGAGTATTGAAT
TATAAGACTGGCACTGAAAAGATTGAAGGGATCAGCCTTGACATGCCCATATTGATGGAA
GATAAATCAGCCAACCATTCAATAGACACTTCATCAAGCAACTCAAATTACAGCCTAGGG
ACTGATGCATTTACGGTTATGCGAAACCTAAGGGTGCTCAAACTAAATGATGTGAACCTT
ATTGGATGCTTCAAAGAATTTCCCAAGAGATTAAAATGGCTGTCTTGGCGTAAATGCCCT
TTAAAATCCATTACTAGTGACCTTTCCTTGGAAGGACTAGTATCTATTGACATGCGATAC
AGCAGTTTACAACAAACATGGAGTGGAACCGAGGTTTTGAGATTTCTCAAGATTCTCAAC
CTTAGTCATTCTTGGGAACTTACCAGAACCCCTAGCTTCGCTGGAATGCCCCGGCTGGAG
AAATTAATTCTTAAAGGCTGTGTTAAACTGGTTGATATTGATGAATCTATTGGTTATCTC
CAAGAAATCGCCCTACTGAATCTAAAATACTGCAAGAGCATCAGAAAGCTGCCAAGAAAT
ATTGGTAAACTTGAAAGTCTTAAAACACTTGATATATCCTTCTGCTCAAGTCTGGAGTCG
CTGCCAATGGAGCTTAACATGATAGATTCTTTGAAAGTGCTAAGAGCTGATGGAATTGGT
CTAAACCAAATAGTCTGTAACACCAATGAGCAGAAATCATTACAGGCACTATTTTCATCT
TGGATATCAAAGCCAAGAATCTCTCCTGAAATATCATGGGCCTTTTTACCAAGCTCTTTG
ATGAGCTTGAGCCTTGTGGGTTGCAGGCTGTCTGATGGATCTTTTCCCAAGAAGTTTAGC
AATCTTCCGCTGCTCGAAGAACTGGATCTAAGTGAAAACTCAATTAGTTGCCTCCCAGAG
TGGATCAAGAGTCTCCCTCAGCTCCAGAGCCTCAGTGTCAAGTCTTGTAAGATGCTCAAA
TCACTTACTGAGATGCCAAATAGCATTTCAGAATTGTCAATACATAGTTGCTCATCGTTG
GAGATAGTGACATACCAATCATTGCTATTGGAATATCCAAGCCTGGTTCACGATTACAAT
TGTGACAGTCTAGTCATGATGCAGGGAGATTTTAAGTTAGAAGCTCTAGAAAATGCTGAC
CCGCAGATGCTTAAACGTTTTGGTCTGAATCCTGAAACTGTGGAAAATACTATGGTGAAA
ATGGACCTCTTTTCAAGTTACAAGATAAAAATGCTTCCGCCACAGGGCTTGTACGAGCAA
GGCATCTTCAGTACATTTCTTCCTGGAAATAAGATACCTAGCTGGTTCACGAAGTTAGAG
AATGTGAATGCAGTAAAATTTAACATATCTCAACCTCTCAAAAATATCCAAGGCCTATCC
ATAGCAGTTGTGTATACAAGTTCTGAAAGTGCAGAGAATGAGTTTTCAAGAGCCTACTGG
CGAAAACAGGAGAATATTGTACAGAATAGGACTAAAGATTTGAAGTGGATGCACTATCCA
AGAGTTTTCGGCGTGCCAGAAGGTAATGAAGAAATAACATGGTTAAGTCACTGGAAATTT
GGAGATATGCTACAAGATGGAGATGAAATTTCTATTTTAGTCCGTTTGAATGGGTTGAGG
GTAAAAGAACTTGGCATCGACATTTTGTGTGAGGAGCTGTCAAACTGCAAAGTTGCAAGC
CCAGTTCCCTTGTTTTCGAATGATAACGTTCCTGGAGATGTATCACAACGTGGTAGTGTT
TTTAAAATAGGGAGGTGA