Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053412
CDS Infomation

pacid=37437347 polypeptide=PGSC0003DMP400036037 locus=PGSC0003DMG400020720 ID=PGSC0003DMT400053412.v4.03 annot-version=v4.03
Sequence

ATGGCGGTGAATGGACTGTGTACGTCTACCGATGACTTCCTCAAACGGTGTGAGCAGTCC
GGTGATGCTGCTTACAGTATGCTCCGATCACTCCTTGAACGACTGGAGGATCCGGTTACC
CGGAAAGAGGCTCGGATCTTCCTCACGCTTCTTCAGAAACGTTTTGCTACTAAAGAAGAC
TCCGATCAATGCCTTCAAACTTACCATTTCCAGATTCAAGATATTGTCCTTGAGCAATAT
GAAGGTTTTCAGAAACGTAAGAAACTGGCAATGATGGTCATCCCCAGTATCTTTATCCCA
GAGGATTGGTCCTTCACTTTTTATGAGGGACTAAATAGACACCCGGATTCCATCTTCCAG
GACAAGACAGTTGCAGAGTTGGGATGTGGAAATGGATGGATATCCATTGCCATTGCCGAG
AAATGGTCACCATCAAAGGTATATGGGCTTGATATAAATCCAAGAGCAGTAAAGATCTCG
TGGATAAATTTGTACTTGAATGCTCTGGACGATAATGGCGAACCAATATATGATGACGAA
AAGAAAACGCTTCTAGATAGGATAGAGTTTCACGAATCTGATTTGCTAGCTTATTGCAAA
GATAATCGTATAGAACTTGAACGAATTGTTGGTTGCATACCGCAGATTCTTAATCCAAAT
CCAGATGCAATGTCCAAGTTGATTACTGAAAATGCTAGTGAAGAATTTCTGCATTCATTA
AGCAATTATTGTGCGCTTCAGGGCTTTGTTGAAGATCAGTTTGGCTTAGGGCTTATTGCA
AGGGCAGTTGAAGAAGGTATTTCTGTCATAAAGCCATCAGGCATTATGATTTTCAACATG
GGAGGCCGTCCAGGGCAAGGTGTTTGCAAACGATTATTCGAGCGCCATGGTCTTCGTGTG
AACAAGCTTTGGCAGACTAAAATTCTTCAGGCAGCTGACACAGATATATCAGCTCTAGTT
GAAATCGAGAAAAGCAGCATGCATCGGTTTGAATTTTTCATGGGACTTGTTGGAGATCAG
CCTATCTGTGCTCGAACAGCATGGGCCTATGGCAAGGCTGGTGGCCGAATCTCTCATGCT
TTATCCGTGTACAGCTGTCAACTTCGTCAGCCAAGTCAGGTTAAAAAGATATTTGAGTTC
GTAAAAAACGGATTCCACGATATCAGTAATTCTCTGGATTTATCATTTGAAGATGATGCT
GTAGCAGATGAGAAGATCCCTTTCCTAGCTTATCTTGCTAGCATGCTCAAGGAGAACTCT
GTTTTCCCATACGAGTCACCTGCTGGAAGCAGATGGTTCCGCAATCAGATTGCTGGCTTT
ATGAAAACGTATCACCATTTTCCTCTTATGGCTGATAATGTCGTTGTCTTCCCTTCAAGG
GCTGTGGCGATAGAGAATCTGTTGCGGTTATTCTTGCCACATCTAGCAATTGTGGATGAG
CAACTGTCACATCACCTGCCTAGGCAATGGCTGACCTCATTGAAAATGGAGAAAAGTCAA
TCTGATAGTAATTTGGAGGATGTCATCACTGTTATTGAAGCTCCACGTCAATCTGACTCG
ATGATTGAACTGATAAAGAAGCTGAAGCCCCAAGTTGTAGTTACTGGGATGGCGCAATTT
GAATCAGTTACTAGCTCTTCTTTTGAGTACCTACTTGACATCACAAGGGAAATTGGATGT
CGTCTGTTTTTAGACATATCTGACCAGTTTGAGCTATCCAGCTTGCCCAAATCTAATGGG
GTCCTGAAATACCTTGCTGGAGCTCCTCTTCCCTCACATGCAGCTATTGTCTGTGGCTTA
GTAAAGAATCAGGTATATTCTGATCTGGAGGTAGCTTTTGTCATATCAGAAGACGAAACT
ATTTATAAAGCATTATCCAAAACCATGGAATTATTACAAGGAAATACTGCTCTTATAAGC
CAATATTATTATGGCTGTCTTTTCCATGAGCTGCTATCTTTTCAGCTTGCTGATCGACGT
CCACCTGCTGAGAGAGAAAACGAGAAGTTGAAAGCACCCAAGATGATTGGCTTTCCTAGC
TCTGTCAACTCAGTACTCAATCATGCAGAGTTATCTGTTACTGATTCAGACAATGCTCTG
ATTCACATGGATGTGGATCAAAGTTTTTTACCTATACCAACTCCTGTCAAGGCAGCCATC
TTTGAGAGTTTTGTGAGACAGAACATTGCAGAGTCAGAAATTGATGTCACAGGCAACATT
AGACAGCTAATGGAGAGTAGTTATGGTTTCTCAACGAACAGCAAGACAGAATTCACATAT
GCTGACTGCCCTCTAGCTCTTTTTAGTAAATTGGTACTTTGTTGCATCCATGAAGGTGGG
ACTCTATGCTTCCCAGCTGGCTCAAACGGTAGTTATGTGTCTGCTGCAAAATTTGTGAAA
GCAAATATAGCATATATCCCTACGAATCCAGAGGAAGGGTTCAAATTGACACAGAAAACA
GTTGAAAGTTTTTTGAAGACCGTCAACAGACCTTGGATTTTTATTTCTGGACCAACTGTC
AATCCTACTGGGCAGCTTTACAGCAATGAGGAGATAAAGAGTATATTATCTGTGTGTTCA
AATTTTGGGGCTAGGGTCATAATTGATACTTCATTTTCTGGTGTGGAATTCAACTCGAAG
GGCTCGGATGGCTGGAATTTGAAGGACACTCTAGCTCAACTAAGATCTCAGAATCAGTCA
TTCTGTGTTTCTTTGCTTGGAGGATTGTTTCTGAAGATGCTTACTGCTGGAGTCACATTT
GGATTTCTGCTTCTAGACCAGCCTGCGCTAATTGAGGCGTTCCACAGTTTTCCGGGTTTG
AGTAAACCTCACAGCACTATCAAATACCAAGTAAAGAAGCTGTTGGAGTCAAGAGAACGA
ACAGCAGAGCTTTCCAATGCTGTCTCAGAGCATGAAAATATTCTGGCTAGTCGATATAAG
CTCTTGAAAAAGACCCTTGAAAGTTGTGGCTGGGACGTGCTTGAAGCTTATTCTGGCGTT
TCAGTGGTGGCAAAGCCATCTACCTACCTTGGGAAGACAGTGAAAATTGGTGAAGATTCG
TTTTCATGGGAAGGCAAACTTGATGACACAAATATTAGAGAAGCCATGCTTAAGACCACG
GGCTTGTGCATCAACAGCTCTACATGGACCGGAATTCCTGGTTACTGTCGCTTCACCATT
GCCTTAGAAGATGGCCATTTCGAGCGTGCATTAGCTTGCATTGTCAAATTTAGAGATATG
GTCGATAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400036037
PEP Infomation

pacid=37437347 transcript=PGSC0003DMT400053412 locus=PGSC0003DMG400020720 ID=PGSC0003DMT400053412.v4.03 annot-version=v4.03
Sequence

MAVNGLCTSTDDFLKRCEQSGDAAYSMLRSLLERLEDPVTRKEARIFLTLLQKRFATKED
SDQCLQTYHFQIQDIVLEQYEGFQKRKKLAMMVIPSIFIPEDWSFTFYEGLNRHPDSIFQ
DKTVAELGCGNGWISIAIAEKWSPSKVYGLDINPRAVKISWINLYLNALDDNGEPIYDDE
KKTLLDRIEFHESDLLAYCKDNRIELERIVGCIPQILNPNPDAMSKLITENASEEFLHSL
SNYCALQGFVEDQFGLGLIARAVEEGISVIKPSGIMIFNMGGRPGQGVCKRLFERHGLRV
NKLWQTKILQAADTDISALVEIEKSSMHRFEFFMGLVGDQPICARTAWAYGKAGGRISHA
LSVYSCQLRQPSQVKKIFEFVKNGFHDISNSLDLSFEDDAVADEKIPFLAYLASMLKENS
VFPYESPAGSRWFRNQIAGFMKTYHHFPLMADNVVVFPSRAVAIENLLRLFLPHLAIVDE
QLSHHLPRQWLTSLKMEKSQSDSNLEDVITVIEAPRQSDSMIELIKKLKPQVVVTGMAQF
ESVTSSSFEYLLDITREIGCRLFLDISDQFELSSLPKSNGVLKYLAGAPLPSHAAIVCGL
VKNQVYSDLEVAFVISEDETIYKALSKTMELLQGNTALISQYYYGCLFHELLSFQLADRR
PPAERENEKLKAPKMIGFPSSVNSVLNHAELSVTDSDNALIHMDVDQSFLPIPTPVKAAI
FESFVRQNIAESEIDVTGNIRQLMESSYGFSTNSKTEFTYADCPLALFSKLVLCCIHEGG
TLCFPAGSNGSYVSAAKFVKANIAYIPTNPEEGFKLTQKTVESFLKTVNRPWIFISGPTV
NPTGQLYSNEEIKSILSVCSNFGARVIIDTSFSGVEFNSKGSDGWNLKDTLAQLRSQNQS
FCVSLLGGLFLKMLTAGVTFGFLLLDQPALIEAFHSFPGLSKPHSTIKYQVKKLLESRER
TAELSNAVSEHENILASRYKLLKKTLESCGWDVLEAYSGVSVVAKPSTYLGKTVKIGEDS
FSWEGKLDDTNIREAMLKTTGLCINSSTWTGIPGYCRFTIALEDGHFERALACIVKFRDM
VDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400053412
Transcript Infomation

pacid=37437347 locus=PGSC0003DMG400020720 ID=PGSC0003DMT400053412.v4.03 annot-version=v4.03
Sequence

ATGGCGGTGAATGGACTGTGTACGTCTACCGATGACTTCCTCAAACGGTGTGAGCAGTCC
GGTGATGCTGCTTACAGTATGCTCCGATCACTCCTTGAACGACTGGAGGATCCGGTTACC
CGGAAAGAGGCTCGGATCTTCCTCACGCTTCTTCAGAAACGTTTTGCTACTAAAGAAGAC
TCCGATCAATGCCTTCAAACTTACCATTTCCAGATTCAAGATATTGTCCTTGAGCAATAT
GAAGGTTTTCAGAAACGTAAGAAACTGGCAATGATGGTCATCCCCAGTATCTTTATCCCA
GAGGATTGGTCCTTCACTTTTTATGAGGGACTAAATAGACACCCGGATTCCATCTTCCAG
GACAAGACAGTTGCAGAGTTGGGATGTGGAAATGGATGGATATCCATTGCCATTGCCGAG
AAATGGTCACCATCAAAGGTATATGGGCTTGATATAAATCCAAGAGCAGTAAAGATCTCG
TGGATAAATTTGTACTTGAATGCTCTGGACGATAATGGCGAACCAATATATGATGACGAA
AAGAAAACGCTTCTAGATAGGATAGAGTTTCACGAATCTGATTTGCTAGCTTATTGCAAA
GATAATCGTATAGAACTTGAACGAATTGTTGGTTGCATACCGCAGATTCTTAATCCAAAT
CCAGATGCAATGTCCAAGTTGATTACTGAAAATGCTAGTGAAGAATTTCTGCATTCATTA
AGCAATTATTGTGCGCTTCAGGGCTTTGTTGAAGATCAGTTTGGCTTAGGGCTTATTGCA
AGGGCAGTTGAAGAAGGTATTTCTGTCATAAAGCCATCAGGCATTATGATTTTCAACATG
GGAGGCCGTCCAGGGCAAGGTGTTTGCAAACGATTATTCGAGCGCCATGGTCTTCGTGTG
AACAAGCTTTGGCAGACTAAAATTCTTCAGGCAGCTGACACAGATATATCAGCTCTAGTT
GAAATCGAGAAAAGCAGCATGCATCGGTTTGAATTTTTCATGGGACTTGTTGGAGATCAG
CCTATCTGTGCTCGAACAGCATGGGCCTATGGCAAGGCTGGTGGCCGAATCTCTCATGCT
TTATCCGTGTACAGCTGTCAACTTCGTCAGCCAAGTCAGGTTAAAAAGATATTTGAGTTC
GTAAAAAACGGATTCCACGATATCAGTAATTCTCTGGATTTATCATTTGAAGATGATGCT
GTAGCAGATGAGAAGATCCCTTTCCTAGCTTATCTTGCTAGCATGCTCAAGGAGAACTCT
GTTTTCCCATACGAGTCACCTGCTGGAAGCAGATGGTTCCGCAATCAGATTGCTGGCTTT
ATGAAAACGTATCACCATTTTCCTCTTATGGCTGATAATGTCGTTGTCTTCCCTTCAAGG
GCTGTGGCGATAGAGAATCTGTTGCGGTTATTCTTGCCACATCTAGCAATTGTGGATGAG
CAACTGTCACATCACCTGCCTAGGCAATGGCTGACCTCATTGAAAATGGAGAAAAGTCAA
TCTGATAGTAATTTGGAGGATGTCATCACTGTTATTGAAGCTCCACGTCAATCTGACTCG
ATGATTGAACTGATAAAGAAGCTGAAGCCCCAAGTTGTAGTTACTGGGATGGCGCAATTT
GAATCAGTTACTAGCTCTTCTTTTGAGTACCTACTTGACATCACAAGGGAAATTGGATGT
CGTCTGTTTTTAGACATATCTGACCAGTTTGAGCTATCCAGCTTGCCCAAATCTAATGGG
GTCCTGAAATACCTTGCTGGAGCTCCTCTTCCCTCACATGCAGCTATTGTCTGTGGCTTA
GTAAAGAATCAGGTATATTCTGATCTGGAGGTAGCTTTTGTCATATCAGAAGACGAAACT
ATTTATAAAGCATTATCCAAAACCATGGAATTATTACAAGGAAATACTGCTCTTATAAGC
CAATATTATTATGGCTGTCTTTTCCATGAGCTGCTATCTTTTCAGCTTGCTGATCGACGT
CCACCTGCTGAGAGAGAAAACGAGAAGTTGAAAGCACCCAAGATGATTGGCTTTCCTAGC
TCTGTCAACTCAGTACTCAATCATGCAGAGTTATCTGTTACTGATTCAGACAATGCTCTG
ATTCACATGGATGTGGATCAAAGTTTTTTACCTATACCAACTCCTGTCAAGGCAGCCATC
TTTGAGAGTTTTGTGAGACAGAACATTGCAGAGTCAGAAATTGATGTCACAGGCAACATT
AGACAGCTAATGGAGAGTAGTTATGGTTTCTCAACGAACAGCAAGACAGAATTCACATAT
GCTGACTGCCCTCTAGCTCTTTTTAGTAAATTGGTACTTTGTTGCATCCATGAAGGTGGG
ACTCTATGCTTCCCAGCTGGCTCAAACGGTAGTTATGTGTCTGCTGCAAAATTTGTGAAA
GCAAATATAGCATATATCCCTACGAATCCAGAGGAAGGGTTCAAATTGACACAGAAAACA
GTTGAAAGTTTTTTGAAGACCGTCAACAGACCTTGGATTTTTATTTCTGGACCAACTGTC
AATCCTACTGGGCAGCTTTACAGCAATGAGGAGATAAAGAGTATATTATCTGTGTGTTCA
AATTTTGGGGCTAGGGTCATAATTGATACTTCATTTTCTGGTGTGGAATTCAACTCGAAG
GGCTCGGATGGCTGGAATTTGAAGGACACTCTAGCTCAACTAAGATCTCAGAATCAGTCA
TTCTGTGTTTCTTTGCTTGGAGGATTGTTTCTGAAGATGCTTACTGCTGGAGTCACATTT
GGATTTCTGCTTCTAGACCAGCCTGCGCTAATTGAGGCGTTCCACAGTTTTCCGGGTTTG
AGTAAACCTCACAGCACTATCAAATACCAAGTAAAGAAGCTGTTGGAGTCAAGAGAACGA
ACAGCAGAGCTTTCCAATGCTGTCTCAGAGCATGAAAATATTCTGGCTAGTCGATATAAG
CTCTTGAAAAAGACCCTTGAAAGTTGTGGCTGGGACGTGCTTGAAGCTTATTCTGGCGTT
TCAGTGGTGGCAAAGCCATCTACCTACCTTGGGAAGACAGTGAAAATTGGTGAAGATTCG
TTTTCATGGGAAGGCAAACTTGATGACACAAATATTAGAGAAGCCATGCTTAAGACCACG
GGCTTGTGCATCAACAGCTCTACATGGACCGGAATTCCTGGTTACTGTCGCTTCACCATT
GCCTTAGAAGATGGCCATTTCGAGCGTGCATTAGCTTGCATTGTCAAATTTAGAGATATG
GTCGATAAATGA