Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053382
CDS Infomation

pacid=37437875 polypeptide=PGSC0003DMP400036012 locus=PGSC0003DMG400020711 ID=PGSC0003DMT400053382.v4.03 annot-version=v4.03
Sequence

ATGGCACACGTTGCTGCAAATCATTTCGGTGGCGGGACTCATCCAGGGGTGTCTGCAAAT
GGTGCATTATACAAGGAACTTTGGCATGCCTGTGCTGGACCTCTCGTAACAGTTCCTCGT
GAAGGGGAAAGAGTTTATTATTTCCCACAGGGTCACATGGAACAGCTTGAAGCATCGACA
CACCAGGGAGTAGACCAACACCTTCCGTCTTTCAATTTGCCAGCTAAAATTTTATGCAAA
GTGATGAATGTCCAACTTCGGGCCGAGTCAGAGACAGATGAGGTGTATGCACAGATAACT
CTGCTTCCTGAACAAGATCAAGGCGAGATCACAAGCCCTGATCCTCCTCCCCCTGAACCT
GAAAAGTGCACTGTCCATTCGTTTTGCAAGACTCTTACTGCATCTGATACTAGCACCCAT
GGTGGGTTTTCTGTTCTCCGAAGGCATGCAGATGAATGTTTACCTCAACTGGACATGTCG
CAACAACCACCATGGCAGGAATTGGTCGCTAGTGATCTACATGGCAATGAATGGCACTTC
CGCCACATTTTTCGAGGTCAACCTAGGCGACACTTGCTCACAACTGGGTGGAGTGTTTTT
GTCAGTGCAAAGAAGCTGGTTGCTGGAGATGCTTTCATCTTTCTCAGGGGAGACAGTGGG
GAGCTTAGAGTTGGTGTTAGGAGACTCATGAGACAGCTAAATAATATGCCATCTTCTGTG
ATTTCAAGTCACAGTATGCATTTGGGTGTTCTTGCAACTGCATCTCATGCCATCTCAACT
GGGACCCTCTTCTCGGTGTTCTATAAGCCTAGGACTAGTCAGTCAGAATTCATTGTCAGT
GTGAACAAATATCTTGAAGCACGAAATCACAAGCTTTCTGTTGGGATGAGGTTTAAAATG
AGATTTGAGGGTGAGGAAGTTCCAGAAAGAAGGTTTAGTGGAACAATTGTTGGTGTTGGT
GATAACCCATCATCTAGATGGCCTGATTCTGAATGGAGATCTTTGAAGGTTCACTGGGAT
GAACCATCGTCAATTTTGCGTCCAGATAGGGTTTCTCCATGGGATATGGAACCACTTGTC
GCAGCAACACCTACAAACACCCAGCCTCCTCAAAGAAATAAGCGTGCTCGACCGTCAGTT
TTACCGTCGCCAGTGCAAGAACTTCCTGCTTTAGGAATGTGGAAGTCTCCTGTAGATTCT
CCTTCATCATTCTCGTACTGTGATCCGTCTCGTGGGCGAGATCTCTACCCTTCACCCAAA
CTTTCTTCTGCCGCAAAGGGCCTGGGTTATGGTGAGAATGGTTCCATGCCTCTTTCTACC
AAAACGATGTACTGGTCAAGTCAATCGGAGACATGTACAGAGTCTGTTGCACCTGCTAGT
GAAAAGAGACCGGCTAATGGATGTAGGTTATTCGGAATTGAGTTGCGGGATTGTCCAACC
ATAGACGAATCCTCATCGGTTGCTATGCCAAGTGCTGTAATGGAGGATCTGCCAGCTCCA
TCTTTAAATATTGATTCTGACCGAAACTCCGAACCATCAAATCCAATTCCTTCAGTAAGT
TGTGAGCCTGAAAAGTCATCTCTGAGGTCTACCCACGAGTCTCAAAGCAAACAAATCCGG
AGTTGCACTAAGGTGCATATGCAAGGGAAGGCAGTTGGGAGGGCAGTTGATCTCACAAGA
TTAGATAGTTATGAAGATCTGCTTAAGAAATTGGAGGAGATGTTTGAGATTGAAGGTGAA
CTTCGTGGATCAACCAAGAAATGGCAGGTAGTCTACACAGATAACGAGGACGACATGATG
ATGGTTGGAGATGACCCATGGCAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036012
PEP Infomation

pacid=37437875 transcript=PGSC0003DMT400053382 locus=PGSC0003DMG400020711 ID=PGSC0003DMT400053382.v4.03 annot-version=v4.03
Sequence

MAHVAANHFGGGTHPGVSANGALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEAST
HQGVDQHLPSFNLPAKILCKVMNVQLRAESETDEVYAQITLLPEQDQGEITSPDPPPPEP
EKCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSQQPPWQELVASDLHGNEWHF
RHIFRGQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSV
ISSHSMHLGVLATASHAISTGTLFSVFYKPRTSQSEFIVSVNKYLEARNHKLSVGMRFKM
RFEGEEVPERRFSGTIVGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLV
AATPTNTQPPQRNKRARPSVLPSPVQELPALGMWKSPVDSPSSFSYCDPSRGRDLYPSPK
LSSAAKGLGYGENGSMPLSTKTMYWSSQSETCTESVAPASEKRPANGCRLFGIELRDCPT
IDESSSVAMPSAVMEDLPAPSLNIDSDRNSEPSNPIPSVSCEPEKSSLRSTHESQSKQIR
SCTKVHMQGKAVGRAVDLTRLDSYEDLLKKLEEMFEIEGELRGSTKKWQVVYTDNEDDMM
MVGDDPWQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400053382
Transcript Infomation

pacid=37437875 locus=PGSC0003DMG400020711 ID=PGSC0003DMT400053382.v4.03 annot-version=v4.03
Sequence

ATGGCACACGTTGCTGCAAATCATTTCGGTGGCGGGACTCATCCAGGGGTGTCTGCAAAT
GGTGCATTATACAAGGAACTTTGGCATGCCTGTGCTGGACCTCTCGTAACAGTTCCTCGT
GAAGGGGAAAGAGTTTATTATTTCCCACAGGGTCACATGGAACAGCTTGAAGCATCGACA
CACCAGGGAGTAGACCAACACCTTCCGTCTTTCAATTTGCCAGCTAAAATTTTATGCAAA
GTGATGAATGTCCAACTTCGGGCCGAGTCAGAGACAGATGAGGTGTATGCACAGATAACT
CTGCTTCCTGAACAAGATCAAGGCGAGATCACAAGCCCTGATCCTCCTCCCCCTGAACCT
GAAAAGTGCACTGTCCATTCGTTTTGCAAGACTCTTACTGCATCTGATACTAGCACCCAT
GGTGGGTTTTCTGTTCTCCGAAGGCATGCAGATGAATGTTTACCTCAACTGGACATGTCG
CAACAACCACCATGGCAGGAATTGGTCGCTAGTGATCTACATGGCAATGAATGGCACTTC
CGCCACATTTTTCGAGGTCAACCTAGGCGACACTTGCTCACAACTGGGTGGAGTGTTTTT
GTCAGTGCAAAGAAGCTGGTTGCTGGAGATGCTTTCATCTTTCTCAGGGGAGACAGTGGG
GAGCTTAGAGTTGGTGTTAGGAGACTCATGAGACAGCTAAATAATATGCCATCTTCTGTG
ATTTCAAGTCACAGTATGCATTTGGGTGTTCTTGCAACTGCATCTCATGCCATCTCAACT
GGGACCCTCTTCTCGGTGTTCTATAAGCCTAGGACTAGTCAGTCAGAATTCATTGTCAGT
GTGAACAAATATCTTGAAGCACGAAATCACAAGCTTTCTGTTGGGATGAGGTTTAAAATG
AGATTTGAGGGTGAGGAAGTTCCAGAAAGAAGGTTTAGTGGAACAATTGTTGGTGTTGGT
GATAACCCATCATCTAGATGGCCTGATTCTGAATGGAGATCTTTGAAGGTTCACTGGGAT
GAACCATCGTCAATTTTGCGTCCAGATAGGGTTTCTCCATGGGATATGGAACCACTTGTC
GCAGCAACACCTACAAACACCCAGCCTCCTCAAAGAAATAAGCGTGCTCGACCGTCAGTT
TTACCGTCGCCAGTGCAAGAACTTCCTGCTTTAGGAATGTGGAAGTCTCCTGTAGATTCT
CCTTCATCATTCTCGTACTGTGATCCGTCTCGTGGGCGAGATCTCTACCCTTCACCCAAA
CTTTCTTCTGCCGCAAAGGGCCTGGGTTATGGTGAGAATGGTTCCATGCCTCTTTCTACC
AAAACGATGTACTGGTCAAGTCAATCGGAGACATGTACAGAGTCTGTTGCACCTGCTAGT
GAAAAGAGACCGGCTAATGGATGTAGGTTATTCGGAATTGAGTTGCGGGATTGTCCAACC
ATAGACGAATCCTCATCGGTTGCTATGCCAAGTGCTGTAATGGAGGATCTGCCAGCTCCA
TCTTTAAATATTGATTCTGACCGAAACTCCGAACCATCAAATCCAATTCCTTCAGTAAGT
TGTGAGCCTGAAAAGTCATCTCTGAGGTCTACCCACGAGTCTCAAAGCAAACAAATCCGG
AGTTGCACTAAGGTGCATATGCAAGGGAAGGCAGTTGGGAGGGCAGTTGATCTCACAAGA
TTAGATAGTTATGAAGATCTGCTTAAGAAATTGGAGGAGATGTTTGAGATTGAAGGTGAA
CTTCGTGGATCAACCAAGAAATGGCAGGTAGTCTACACAGATAACGAGGACGACATGATG
ATGGTTGGAGATGACCCATGGCAGTAA