Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053368
CDS Infomation

pacid=37435823 polypeptide=PGSC0003DMP400036002 locus=PGSC0003DMG400020706 ID=PGSC0003DMT400053368.v4.03 annot-version=v4.03
Sequence

ATGGGTTCTTTTAAGAGGAAGTCGCAAGAATTCTCCAATGAGGGTGATATTCCTCCAAGT
AAACAGCTGAAACAAAATGATTTACTTGGTGTGGATGAGCCAGTGACATGTCTGCATGAT
GTGTCATATCCAGAAGGGTATGTTCCCTCTGCTTCAACTTCTGGTTTGCCTCAACAAGAT
TCAAAACCTGCTAAAGAGTTCCCTTTTCCACTCGACCCTTTTCAATCTGAAGCAATCAAA
TGTATTAATAATGGCGAATCCGTCATGGTATCAGCACACACGTCAGCGGGAAAGACAGTT
GTGGCATTATATGCAATTGCCTTGTCGTTGAAGAATAACCAGCGAGTAGTATATACTTCA
CCAATTAAGGCTCTTAGTAATCAGAAGTATAGAGAATTCAAAGAGGAGTTTTCAGATGTG
GGTTTGATGACTGGAGATGTCACAATTGATCCAAATGCTTCTTGCCTGGTAATGACTACA
GAAATCTGGCGTAGTATGCAGTACAAAGGATCAGAGGTTACAAGGGAGGTGGCTTGGGTT
ATTTTTGATGAGGTACACTACATGCGTGATAGAGAAAGAGGTGTGGTTTGGGAGGAAAGC
ATTGTTATGGCCCCAAAAAATTCCAACTTTGTCTTCCTCTCAGCCACGGTGCCCAATGCT
AAAGAGTTTGCGGATTGGGTTGCAAAGGTCCATCAGCAACCATGTCACATTGTTTATACG
GACTATAGACCCACACCACTTCAGCATTATATATTTCCTTCTGGTGGTGATGGGTTATAC
TTGGTGGTTGATGATAAAGGGAAGTTTCGCGAGGATAGTTTTCAGAAAGCTTTGAATGCT
CTTGTTCCAGCCAATGAAGGGGATAAAAAAAGAGAAAGTAGCAAGTGGCAGAAGGGTCTG
GTTGTTGGCAAATCTGGTGAGGATAGTGACATATTCAAGATGGTTAAAATGATTATCCAG
CGGCAATATGATCCTGTAATATGCTTCAGCTTCAGCAAAAGAGAGTGTGAATTTCTAGCA
ATGCAGATGGCTAAAATGGATTTAAACAATGATGATGAGAAGGTGAATATTGAAACTATT
TTCTGGAGTGCCATGGACATGTTGTCGGATGATGATAAAAAGCTGCCTCAGGTTTCAAAT
ATGCTACCCCTATTGAAACGTGGAATTGGTGTGCATCATTCTGGTTTGCTTCCTATATTG
AAAGAAGTGATTGAAATCCTGTTCCAAGAAGGATTCATCAAGTGTTTGTTTGCCACAGAG
ACTTTCAGTATAGGGTTGAACATGCCTGCAAAAACTGTTGTCTTCACAAATGTTCGTAAA
TTTGATGGAGACAAGTTTAGGTGGTTATCCAGTGGTGAGTATATTCAGATGAGTGGTCGT
GCTGGCCGTCGGGGGATTGATGATCGTGGGATCTGCATCCTTATGGTTGATGAGAAACTT
GAACCTTCTACAGCTAAATTCATGCTAAAAGGAAGTGCTGATGCATTAAACAGTGCCTTC
CATTTAAGCTATAACATGCTTTTAAATCAAATACGATCTGAAGATGGTCATCCTGAAAAT
CTGCTGCGTAACTCATTTTATCAATTTCAAGCAGATCGTGCACTTCCTGATCTTGAGAAA
CAAGCAAAGATTCTTGAAGAGGAGAGAAACTCAATTGTGATTGAAGAAGAAGACAGCCTT
GAGAGATATTATAATCTGCTAGAACAATATAAGAGCTTGAAGAGGGATGTACGTGGCATT
GTTTTTTCTCCAAAATATTGCTTACCTTTCCTGCAGCCTGGTAGGCTTGTATGCATTGAG
TGTACAAAGGTTGATGTTGATGTTCCAACCTTCTCCATCAATGAAGAGGTCACATGGGGA
GTAATAGTTAATTTTGAAAGGGTGAAAGGGATTTCTGAAGATGATGCAAACAAAAAACCG
GAGGACGCGAACTATACAGTAGATGTACTCACGAGATGTATAGTGCAGAAGGATGAGGTG
GGTAGAAAGACAATTAAAGTCGTTCGGTTGAAAGATGCTGGGGAACCAGCTGTTGTCTCT
CTTCCTTTGTCCCAGATTGATAGTTTGAGCAGTGTCCGTCTTGTGATACCAAAGGATCTT
TTGCCTTCAGAAGTTCGAGAAAATACACTAAAGAAGGTTTCTGAAGTTCTCAATAGATTT
TTAAAAGAGGGCATGCCTCTTTTACACCCAGAAGATGACATGAAGGTTCAAAGTAGCTCG
TACAGGAAGGCTTCGAGTAGGATAGAGGCACTGGAGAGTCTGTTTGAAGAGTATGAGATA
GCGAAGTCTCCCCTTATAAAAGAGAAGCTTAAGGTTTTGCATAAGAAGAAAGAACTTACT
AGCAAAATCAAATCAATCAAGAAAACATTGCGTACTTCAACTGTCTTAGCTTTCAAAGAT
GAACTTAAAGCAAGGAAAAGAGCTCTTAGAAGACTTGGATACATCAGGGATGACGTTGTG
TTGCAGAAAGGGAAGGTAGCCAGCGAAATCAGCAGTGCAGATGAGTTGACCTTGACTGAA
TTGATGTTGAATGGGACCTTCAGAAATATTAAAGTGGAGGATATGGTTTCTCTTCTCTCT
TGTTTTGTTTGGCAAGAAAAGCTTCAGGATGCTCAAAAGCCCCAGGAAGAGCTTGGGTTG
CTCTTTGCACAATTACAGGATACAGCTCGGCAAGTGGCAAAAGTTCAGCTCGAGAGCAAG
GTTCAAATAGATGTTGAGAACTTCGTGAGTTCTTTCCGACCTGATATCATGGAGGCCGTC
TATGCCTGGGCTAAAGGATCTAAGTTTTATGAGATTATGGAAATGACTCCGGTGTTTGAA
GGCAGTTTAATCAGGGCTATCAGGAGATTGGAGGAAGTTCTTCAGCAGCTAATACAAGCT
GCTAAATCCATTGGGGATATCGTGCTTGAGGCAAAATTTGAAGAGGCTGTTACCAAGATC
AAGAGGGATATTGTCTTTGCTGCATCTCTATATTTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400036002
PEP Infomation

pacid=37435823 transcript=PGSC0003DMT400053368 locus=PGSC0003DMG400020706 ID=PGSC0003DMT400053368.v4.03 annot-version=v4.03
Sequence

MGSFKRKSQEFSNEGDIPPSKQLKQNDLLGVDEPVTCLHDVSYPEGYVPSASTSGLPQQD
SKPAKEFPFPLDPFQSEAIKCINNGESVMVSAHTSAGKTVVALYAIALSLKNNQRVVYTS
PIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAWV
IFDEVHYMRDRERGVVWEESIVMAPKNSNFVFLSATVPNAKEFADWVAKVHQQPCHIVYT
DYRPTPLQHYIFPSGGDGLYLVVDDKGKFREDSFQKALNALVPANEGDKKRESSKWQKGL
VVGKSGEDSDIFKMVKMIIQRQYDPVICFSFSKRECEFLAMQMAKMDLNNDDEKVNIETI
FWSAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGFIKCLFATE
TFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDDRGICILMVDEKL
EPSTAKFMLKGSADALNSAFHLSYNMLLNQIRSEDGHPENLLRNSFYQFQADRALPDLEK
QAKILEEERNSIVIEEEDSLERYYNLLEQYKSLKRDVRGIVFSPKYCLPFLQPGRLVCIE
CTKVDVDVPTFSINEEVTWGVIVNFERVKGISEDDANKKPEDANYTVDVLTRCIVQKDEV
GRKTIKVVRLKDAGEPAVVSLPLSQIDSLSSVRLVIPKDLLPSEVRENTLKKVSEVLNRF
LKEGMPLLHPEDDMKVQSSSYRKASSRIEALESLFEEYEIAKSPLIKEKLKVLHKKKELT
SKIKSIKKTLRTSTVLAFKDELKARKRALRRLGYIRDDVVLQKGKVASEISSADELTLTE
LMLNGTFRNIKVEDMVSLLSCFVWQEKLQDAQKPQEELGLLFAQLQDTARQVAKVQLESK
VQIDVENFVSSFRPDIMEAVYAWAKGSKFYEIMEMTPVFEGSLIRAIRRLEEVLQQLIQA
AKSIGDIVLEAKFEEAVTKIKRDIVFAASLYL*

Transcript Sequence

Transcript ID

PGSC0003DMT400053368
Transcript Infomation

pacid=37435823 locus=PGSC0003DMG400020706 ID=PGSC0003DMT400053368.v4.03 annot-version=v4.03
Sequence

ATGGGTTCTTTTAAGAGGAAGTCGCAAGAATTCTCCAATGAGGGTGATATTCCTCCAAGT
AAACAGCTGAAACAAAATGATTTACTTGGTGTGGATGAGCCAGTGACATGTCTGCATGAT
GTGTCATATCCAGAAGGGTATGTTCCCTCTGCTTCAACTTCTGGTTTGCCTCAACAAGAT
TCAAAACCTGCTAAAGAGTTCCCTTTTCCACTCGACCCTTTTCAATCTGAAGCAATCAAA
TGTATTAATAATGGCGAATCCGTCATGGTATCAGCACACACGTCAGCGGGAAAGACAGTT
GTGGCATTATATGCAATTGCCTTGTCGTTGAAGAATAACCAGCGAGTAGTATATACTTCA
CCAATTAAGGCTCTTAGTAATCAGAAGTATAGAGAATTCAAAGAGGAGTTTTCAGATGTG
GGTTTGATGACTGGAGATGTCACAATTGATCCAAATGCTTCTTGCCTGGTAATGACTACA
GAAATCTGGCGTAGTATGCAGTACAAAGGATCAGAGGTTACAAGGGAGGTGGCTTGGGTT
ATTTTTGATGAGGTACACTACATGCGTGATAGAGAAAGAGGTGTGGTTTGGGAGGAAAGC
ATTGTTATGGCCCCAAAAAATTCCAACTTTGTCTTCCTCTCAGCCACGGTGCCCAATGCT
AAAGAGTTTGCGGATTGGGTTGCAAAGGTCCATCAGCAACCATGTCACATTGTTTATACG
GACTATAGACCCACACCACTTCAGCATTATATATTTCCTTCTGGTGGTGATGGGTTATAC
TTGGTGGTTGATGATAAAGGGAAGTTTCGCGAGGATAGTTTTCAGAAAGCTTTGAATGCT
CTTGTTCCAGCCAATGAAGGGGATAAAAAAAGAGAAAGTAGCAAGTGGCAGAAGGGTCTG
GTTGTTGGCAAATCTGGTGAGGATAGTGACATATTCAAGATGGTTAAAATGATTATCCAG
CGGCAATATGATCCTGTAATATGCTTCAGCTTCAGCAAAAGAGAGTGTGAATTTCTAGCA
ATGCAGATGGCTAAAATGGATTTAAACAATGATGATGAGAAGGTGAATATTGAAACTATT
TTCTGGAGTGCCATGGACATGTTGTCGGATGATGATAAAAAGCTGCCTCAGGTTTCAAAT
ATGCTACCCCTATTGAAACGTGGAATTGGTGTGCATCATTCTGGTTTGCTTCCTATATTG
AAAGAAGTGATTGAAATCCTGTTCCAAGAAGGATTCATCAAGTGTTTGTTTGCCACAGAG
ACTTTCAGTATAGGGTTGAACATGCCTGCAAAAACTGTTGTCTTCACAAATGTTCGTAAA
TTTGATGGAGACAAGTTTAGGTGGTTATCCAGTGGTGAGTATATTCAGATGAGTGGTCGT
GCTGGCCGTCGGGGGATTGATGATCGTGGGATCTGCATCCTTATGGTTGATGAGAAACTT
GAACCTTCTACAGCTAAATTCATGCTAAAAGGAAGTGCTGATGCATTAAACAGTGCCTTC
CATTTAAGCTATAACATGCTTTTAAATCAAATACGATCTGAAGATGGTCATCCTGAAAAT
CTGCTGCGTAACTCATTTTATCAATTTCAAGCAGATCGTGCACTTCCTGATCTTGAGAAA
CAAGCAAAGATTCTTGAAGAGGAGAGAAACTCAATTGTGATTGAAGAAGAAGACAGCCTT
GAGAGATATTATAATCTGCTAGAACAATATAAGAGCTTGAAGAGGGATGTACGTGGCATT
GTTTTTTCTCCAAAATATTGCTTACCTTTCCTGCAGCCTGGTAGGCTTGTATGCATTGAG
TGTACAAAGGTTGATGTTGATGTTCCAACCTTCTCCATCAATGAAGAGGTCACATGGGGA
GTAATAGTTAATTTTGAAAGGGTGAAAGGGATTTCTGAAGATGATGCAAACAAAAAACCG
GAGGACGCGAACTATACAGTAGATGTACTCACGAGATGTATAGTGCAGAAGGATGAGGTG
GGTAGAAAGACAATTAAAGTCGTTCGGTTGAAAGATGCTGGGGAACCAGCTGTTGTCTCT
CTTCCTTTGTCCCAGATTGATAGTTTGAGCAGTGTCCGTCTTGTGATACCAAAGGATCTT
TTGCCTTCAGAAGTTCGAGAAAATACACTAAAGAAGGTTTCTGAAGTTCTCAATAGATTT
TTAAAAGAGGGCATGCCTCTTTTACACCCAGAAGATGACATGAAGGTTCAAAGTAGCTCG
TACAGGAAGGCTTCGAGTAGGATAGAGGCACTGGAGAGTCTGTTTGAAGAGTATGAGATA
GCGAAGTCTCCCCTTATAAAAGAGAAGCTTAAGGTTTTGCATAAGAAGAAAGAACTTACT
AGCAAAATCAAATCAATCAAGAAAACATTGCGTACTTCAACTGTCTTAGCTTTCAAAGAT
GAACTTAAAGCAAGGAAAAGAGCTCTTAGAAGACTTGGATACATCAGGGATGACGTTGTG
TTGCAGAAAGGGAAGGTAGCCAGCGAAATCAGCAGTGCAGATGAGTTGACCTTGACTGAA
TTGATGTTGAATGGGACCTTCAGAAATATTAAAGTGGAGGATATGGTTTCTCTTCTCTCT
TGTTTTGTTTGGCAAGAAAAGCTTCAGGATGCTCAAAAGCCCCAGGAAGAGCTTGGGTTG
CTCTTTGCACAATTACAGGATACAGCTCGGCAAGTGGCAAAAGTTCAGCTCGAGAGCAAG
GTTCAAATAGATGTTGAGAACTTCGTGAGTTCTTTCCGACCTGATATCATGGAGGCCGTC
TATGCCTGGGCTAAAGGATCTAAGTTTTATGAGATTATGGAAATGACTCCGGTGTTTGAA
GGCAGTTTAATCAGGGCTATCAGGAGATTGGAGGAAGTTCTTCAGCAGCTAATACAAGCT
GCTAAATCCATTGGGGATATCGTGCTTGAGGCAAAATTTGAAGAGGCTGTTACCAAGATC
AAGAGGGATATTGTCTTTGCTGCATCTCTATATTTGTAG