Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053365
CDS Infomation

pacid=37435604 polypeptide=PGSC0003DMP400036000 locus=PGSC0003DMG400020705 ID=PGSC0003DMT400053365.v4.03 annot-version=v4.03
Sequence

ATGAAATCAAAGCTTAAGTCATGCTCCCGTGGAACGGCATGCAACTTTATCCATTGTTTC
CGCAATCCTGGTGGAGATTATGAATGGGCGGACTTGGATAAACCACCGCCAAGATACTGG
CTTACGAAGATGGCTGCTTTGTTTGGGTATGCTGATGAGTCTGTCTATGATAGACGGCTT
GAACGGAAAAACTCAGAACGGATGTTGAATTCCTACAAGATGCTGGCAGCTGATTTTGAC
AGGCATCGCTATGATTCAAGGGAGAGAAGGTCTCGCTCAAGGGAGAGCAGAAGCTCAAGG
ATCCACTATGATGATTATGATTTTCATAAAAGGACACATCAAGAGAGAGGCAACCGTACT
GATAAAAAACGGTGCAAAACTCTTGATAAGAAACAATTCGAAGAGGGGACAGGACAACAT
GAAGAGGAAACAAATCATCATGGTGAAAATAGATACCACAGTAGTGACTCTGATTGGGAT
TTATCTGACAGAGAGAAAGAGGGAGTGAGACGCCACCATAGCACAGGGAGAAGATCAAGA
AACCACCATAATGAAAAAATGGGGCGTCAACATCGTAATGGTGACATCAAAAAACGAGTT
TGCGGTTCCGTCTCTGGTGATGATTTGCCGGAAAAGAAGAGATGTAGAGATGCAGGATCT
GGTAACAGAGAGAGGGGCTCAAGACATAGGAAGGAAGATCGTAATACAGATTCTAGCGGT
GAGTGGTTGGATGAGACACGAGACAGAAGTTTGCATCACAAGAAAAGAAGAAGCAGGTCT
AGGCGTCATAACGGTGTTCCATCATCACCTGATCGCTGGGATAAGAGAAGCAAAAGCCAT
GATAGTAATACCACTGGTGACTGGACTGCTGCTATCACAGATAAAAGAAAGCCAAGTTCT
GACAAGAGTGTCGATTCAGATACGGATTACCCTTATCACCATAATGAAGACATTGGGGAA
AGAGGCCGCTGGGAGCCTGATGAAGGTGCTACTGGAACACACTCTAAAAGTAGTAAGAAG
TCTGTAATTGATGATTCTGAAGATCACAATGTGGAATCTGAGTTGAATGATGATGGGGAC
TATAATGGTTGTACAACAAGGGGAAGTAGCCGATCAATCAATCAAAAAAGGAGGGGGAAC
AGTGATAGGATGGACTCTGCAAAGATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400036000
PEP Infomation

pacid=37435604 transcript=PGSC0003DMT400053365 locus=PGSC0003DMG400020705 ID=PGSC0003DMT400053365.v4.03 annot-version=v4.03
Sequence

MKSKLKSCSRGTACNFIHCFRNPGGDYEWADLDKPPPRYWLTKMAALFGYADESVYDRRL
ERKNSERMLNSYKMLAADFDRHRYDSRERRSRSRESRSSRIHYDDYDFHKRTHQERGNRT
DKKRCKTLDKKQFEEGTGQHEEETNHHGENRYHSSDSDWDLSDREKEGVRRHHSTGRRSR
NHHNEKMGRQHRNGDIKKRVCGSVSGDDLPEKKRCRDAGSGNRERGSRHRKEDRNTDSSG
EWLDETRDRSLHHKKRRSRSRRHNGVPSSPDRWDKRSKSHDSNTTGDWTAAITDKRKPSS
DKSVDSDTDYPYHHNEDIGERGRWEPDEGATGTHSKSSKKSVIDDSEDHNVESELNDDGD
YNGCTTRGSSRSINQKRRGNSDRMDSAKI*

Transcript Sequence

Transcript ID

PGSC0003DMT400053365
Transcript Infomation

pacid=37435604 locus=PGSC0003DMG400020705 ID=PGSC0003DMT400053365.v4.03 annot-version=v4.03
Sequence

ATGAAATCAAAGCTTAAGTCATGCTCCCGTGGAACGGCATGCAACTTTATCCATTGTTTC
CGCAATCCTGGTGGAGATTATGAATGGGCGGACTTGGATAAACCACCGCCAAGATACTGG
CTTACGAAGATGGCTGCTTTGTTTGGGTATGCTGATGAGTCTGTCTATGATAGACGGCTT
GAACGGAAAAACTCAGAACGGATGTTGAATTCCTACAAGATGCTGGCAGCTGATTTTGAC
AGGCATCGCTATGATTCAAGGGAGAGAAGGTCTCGCTCAAGGGAGAGCAGAAGCTCAAGG
ATCCACTATGATGATTATGATTTTCATAAAAGGACACATCAAGAGAGAGGCAACCGTACT
GATAAAAAACGGTGCAAAACTCTTGATAAGAAACAATTCGAAGAGGGGACAGGACAACAT
GAAGAGGAAACAAATCATCATGGTGAAAATAGATACCACAGTAGTGACTCTGATTGGGAT
TTATCTGACAGAGAGAAAGAGGGAGTGAGACGCCACCATAGCACAGGGAGAAGATCAAGA
AACCACCATAATGAAAAAATGGGGCGTCAACATCGTAATGGTGACATCAAAAAACGAGTT
TGCGGTTCCGTCTCTGGTGATGATTTGCCGGAAAAGAAGAGATGTAGAGATGCAGGATCT
GGTAACAGAGAGAGGGGCTCAAGACATAGGAAGGAAGATCGTAATACAGATTCTAGCGGT
GAGTGGTTGGATGAGACACGAGACAGAAGTTTGCATCACAAGAAAAGAAGAAGCAGGTCT
AGGCGTCATAACGGTGTTCCATCATCACCTGATCGCTGGGATAAGAGAAGCAAAAGCCAT
GATAGTAATACCACTGGTGACTGGACTGCTGCTATCACAGATAAAAGAAAGCCAAGTTCT
GACAAGAGTGTCGATTCAGATACGGATTACCCTTATCACCATAATGAAGACATTGGGGAA
AGAGGCCGCTGGGAGCCTGATGAAGGTGCTACTGGAACACACTCTAAAAGTAGTAAGAAG
TCTGTAATTGATGATTCTGAAGATCACAATGTGGAATCTGAGTTGAATGATGATGGGGAC
TATAATGGTTGTACAACAAGGGGAAGTAGCCGATCAATCAATCAAAAAAGGAGGGGGAAC
AGTGATAGGATGGACTCTGCAAAGATCTAA