Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053245
CDS Infomation

pacid=37447836 polypeptide=PGSC0003DMP400035914 locus=PGSC0003DMG400020667 ID=PGSC0003DMT400053245.v4.03 annot-version=v4.03
Sequence

ATGAACGGCGATCTGGAAATCTCCGTCGACAAGCTTCCGATCAAGCGTTTAGAGTTTATT
GAAGAACAAGGCGCCGAACGCTTCCCTTCTGATATAGGATACGATGAGAAAACGGTGAAT
TTGATTAGGAGGATTGATTTTGCGTGGGCAGTGGAAAGAGAGGAGCCAAGTAAGAAGCAG
AAGAAAAGCAGTAGTGCTACTTCTTCAAAGGAGACAAGTAGCAGTCAGCCGTGGCAATGG
CAGAGTTTGGTGGAGAATTTGCGATTGGCTCATCAAGAGCTTCAAGTCATTATCGATCTC
ATTCACACTGTGGAGGCAAACGATGCAGTGACAGTGGCTAGCATGACCAGGCCAAAGCAA
TTGCCCAATGAGCATCTGTCAGACCTTGCTGTGTCTATGGCAACCAAGCTGCAATGCTTC
CGTCATTTGGGGAAATATTTTAAGCAATCTGCCAAAGCTTTGGAACAACAAGTGGCTAGA
GAAGCAAGATTTTATGGTGCTCTTATCAGATTGCAGCAAAATTGGAAGGTTAAATGGCAT
CGAATGGTTGCTGCTGCTTCTGGAAATGAAGGGTTTTACATTGATTTATTTGACACTTCA
TTATATGATCCAGCGGTTGCATTTCGCCCATCTTCTGCATCTGTGGTGCGTATTGAGCAT
GACCCAGCTGGGATGCTGGCTGTGAATTTGCCGCCAAATTCCTGCCGGACTCTTCAATTT
GAGTTTCTCGGTGCAAGTGCACCTAGTGGTGTCATAAATCATAGCAGACTGAAACCAAAG
GGCTCTTTTGAGGATTCTTCTGGAGAAACTAAGAGAGAAAAAAGTGATGATGAGCATGTG
AGAGAAACTCATTCAACACTCCGTGAAGTTCATCGAGCAATCTTTGATGAGCAGGTGTTT
GATTTGGTTAATCGTGAAGCATTTAATCCAGCTTTGGGTGCCGACGTGACAGGAATACAA
GAAAACTTGTTACGTTTAAGTATAGGTCAAAGAGCTTCTCTGTCCATTTCACTTGTACCA
TCTACTGACGATGGTCAGACAGCTAATGCTGTGGGTGATGAACATTCAGAAACTGCTATT
GTGCCTTTTGAATCAGTTGATGCTTCAAAACTAGATGAAGGGAAATTTAACTTCAAAAAG
TTGGGGTTTCCCAATCGAATTAGTTTTGAAATTTATTTGCAACAACTTTTTCATGAACAT
GTGTTTATAAAAGCCAAAAATAGATTATCATCTTTGGGTAAACCTCAATTATCTTCTCAG
CCCGTGAAAGATGGTCCCAACCTTTTGGGACATTTCTGCGTCTCTCTAGCTCATAGGATC
TTCTCAAACAAAGTCCTTGCAGAGCTTGAAAGTCTGGTTAGCAGGATACCATATGTCCAA
TTGATATCGCATCCCACTTGGCATTCTCGAACATCATCATGGACGCTCTCCATGGATGTA
CCTGAGTCAATTCTCCATGCAGGAAGCCTGTCTCACTCATCTGACTATGTAAAGAATGTG
AAATTTCACTTTCGTACAAAAGTCATGGTGCGTGATGATTGCATCAGTCTGGAAGGGGAA
GGTGCTCCTAATGTTGTTGGCCTCTTCAAAGGAAAGCCTGATAGTACTTGCCCTATGAAC
AGATATGACTGTGATTTGTCAGATCTTCCAATGGTACTATTGCAGCAGGTTGCTAGCCAG
GTGATACGGTGGCTTCATGAAGAAGCCCTTATGGTTGGTATCAAAGCAAACCGGGATTTC
TTATCCTTGTCATTTGAGCTAGAGCAAGGGGAAACACTCAGTCTTGTGGCACACGTAGAC
CCTGAAGATATTCAAGGATGTATTTCCTGGTGGTTGGTGATGGGCGATGGATTCTCTGAA
GAAAACAAACTTAAAATGGACGTTAACAGTGGTGAATCCGAAACAAGGAAATTTTTAGGT
TATTTATCTTTAGAAGTGCTATACTCGACGTTAATGGATATGGTTAGCGTTAGTAGTACT
GCAGGCCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035914
PEP Infomation

pacid=37447836 transcript=PGSC0003DMT400053245 locus=PGSC0003DMG400020667 ID=PGSC0003DMT400053245.v4.03 annot-version=v4.03
Sequence

MNGDLEISVDKLPIKRLEFIEEQGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEPSKKQ
KKSSSATSSKETSSSQPWQWQSLVENLRLAHQELQVIIDLIHTVEANDAVTVASMTRPKQ
LPNEHLSDLAVSMATKLQCFRHLGKYFKQSAKALEQQVAREARFYGALIRLQQNWKVKWH
RMVAAASGNEGFYIDLFDTSLYDPAVAFRPSSASVVRIEHDPAGMLAVNLPPNSCRTLQF
EFLGASAPSGVINHSRLKPKGSFEDSSGETKREKSDDEHVRETHSTLREVHRAIFDEQVF
DLVNREAFNPALGADVTGIQENLLRLSIGQRASLSISLVPSTDDGQTANAVGDEHSETAI
VPFESVDASKLDEGKFNFKKLGFPNRISFEIYLQQLFHEHVFIKAKNRLSSLGKPQLSSQ
PVKDGPNLLGHFCVSLAHRIFSNKVLAELESLVSRIPYVQLISHPTWHSRTSSWTLSMDV
PESILHAGSLSHSSDYVKNVKFHFRTKVMVRDDCISLEGEGAPNVVGLFKGKPDSTCPMN
RYDCDLSDLPMVLLQQVASQVIRWLHEEALMVGIKANRDFLSLSFELEQGETLSLVAHVD
PEDIQGCISWWLVMGDGFSEENKLKMDVNSGESETRKFLGYLSLEVLYSTLMDMVSVSST
AGH*

Transcript Sequence

Transcript ID

PGSC0003DMT400053245
Transcript Infomation

pacid=37447836 locus=PGSC0003DMG400020667 ID=PGSC0003DMT400053245.v4.03 annot-version=v4.03
Sequence

ATGAACGGCGATCTGGAAATCTCCGTCGACAAGCTTCCGATCAAGCGTTTAGAGTTTATT
GAAGAACAAGGCGCCGAACGCTTCCCTTCTGATATAGGATACGATGAGAAAACGGTGAAT
TTGATTAGGAGGATTGATTTTGCGTGGGCAGTGGAAAGAGAGGAGCCAAGTAAGAAGCAG
AAGAAAAGCAGTAGTGCTACTTCTTCAAAGGAGACAAGTAGCAGTCAGCCGTGGCAATGG
CAGAGTTTGGTGGAGAATTTGCGATTGGCTCATCAAGAGCTTCAAGTCATTATCGATCTC
ATTCACACTGTGGAGGCAAACGATGCAGTGACAGTGGCTAGCATGACCAGGCCAAAGCAA
TTGCCCAATGAGCATCTGTCAGACCTTGCTGTGTCTATGGCAACCAAGCTGCAATGCTTC
CGTCATTTGGGGAAATATTTTAAGCAATCTGCCAAAGCTTTGGAACAACAAGTGGCTAGA
GAAGCAAGATTTTATGGTGCTCTTATCAGATTGCAGCAAAATTGGAAGGTTAAATGGCAT
CGAATGGTTGCTGCTGCTTCTGGAAATGAAGGGTTTTACATTGATTTATTTGACACTTCA
TTATATGATCCAGCGGTTGCATTTCGCCCATCTTCTGCATCTGTGGTGCGTATTGAGCAT
GACCCAGCTGGGATGCTGGCTGTGAATTTGCCGCCAAATTCCTGCCGGACTCTTCAATTT
GAGTTTCTCGGTGCAAGTGCACCTAGTGGTGTCATAAATCATAGCAGACTGAAACCAAAG
GGCTCTTTTGAGGATTCTTCTGGAGAAACTAAGAGAGAAAAAAGTGATGATGAGCATGTG
AGAGAAACTCATTCAACACTCCGTGAAGTTCATCGAGCAATCTTTGATGAGCAGGTGTTT
GATTTGGTTAATCGTGAAGCATTTAATCCAGCTTTGGGTGCCGACGTGACAGGAATACAA
GAAAACTTGTTACGTTTAAGTATAGGTCAAAGAGCTTCTCTGTCCATTTCACTTGTACCA
TCTACTGACGATGGTCAGACAGCTAATGCTGTGGGTGATGAACATTCAGAAACTGCTATT
GTGCCTTTTGAATCAGTTGATGCTTCAAAACTAGATGAAGGGAAATTTAACTTCAAAAAG
TTGGGGTTTCCCAATCGAATTAGTTTTGAAATTTATTTGCAACAACTTTTTCATGAACAT
GTGTTTATAAAAGCCAAAAATAGATTATCATCTTTGGGTAAACCTCAATTATCTTCTCAG
CCCGTGAAAGATGGTCCCAACCTTTTGGGACATTTCTGCGTCTCTCTAGCTCATAGGATC
TTCTCAAACAAAGTCCTTGCAGAGCTTGAAAGTCTGGTTAGCAGGATACCATATGTCCAA
TTGATATCGCATCCCACTTGGCATTCTCGAACATCATCATGGACGCTCTCCATGGATGTA
CCTGAGTCAATTCTCCATGCAGGAAGCCTGTCTCACTCATCTGACTATGTAAAGAATGTG
AAATTTCACTTTCGTACAAAAGTCATGGTGCGTGATGATTGCATCAGTCTGGAAGGGGAA
GGTGCTCCTAATGTTGTTGGCCTCTTCAAAGGAAAGCCTGATAGTACTTGCCCTATGAAC
AGATATGACTGTGATTTGTCAGATCTTCCAATGGTACTATTGCAGCAGGTTGCTAGCCAG
GTGATACGGTGGCTTCATGAAGAAGCCCTTATGGTTGGTATCAAAGCAAACCGGGATTTC
TTATCCTTGTCATTTGAGCTAGAGCAAGGGGAAACACTCAGTCTTGTGGCACACGTAGAC
CCTGAAGATATTCAAGGATGTATTTCCTGGTGGTTGGTGATGGGCGATGGATTCTCTGAA
GAAAACAAACTTAAAATGGACGTTAACAGTGGTGAATCCGAAACAAGGAAATTTTTAGGT
TATTTATCTTTAGAAGTGCTATACTCGACGTTAATGGATATGGTTAGCGTTAGTAGTACT
GCAGGCCATTGA