Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053242
CDS Infomation

pacid=37447504 polypeptide=PGSC0003DMP400035911 locus=PGSC0003DMG400020665 ID=PGSC0003DMT400053242.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAGAATTTCAGAAGCGGTTTACTGATTGTGTGTATTTTTTAGCATCTCCCCTC
ACTTGTAAGAAGGGAATGGAATGTGAATATCGACATAGTGAGATGGCAAGGCTCAATCCC
AGGGATTGCTGGTACTGGGTGGCTGGAAGTTGTCTTAACCCAACATGTGCTTTTCGACAT
CCGCCATTAGAGAGCCATGCTGAGACGTCATCTGAATTGGCTCCTCAACCCAACAAATCT
GATGTGCCTGTTAACAAGACAAATATGCCTTGTTACTTCTATTTCAGTGGCTATTGCAAT
AAAGGTGAAAGATGCGCATATCTGCATGGACCTGATGACGGTGCAACTGCATGGACATCC
TCAAAAGTAGCTTCTGAAGTCCCTGATGAACCGACAGCTGAGATGAAGAAGACATTTGCA
GGAAGTGAAACTGATCTTTCAGCAGTCGAAAAACATCCCAATTCTTCAGAAATGGGGCCC
AAGGAAGCAGCACATGAATATATCAACTCAGAAGTGGATTTTCATTTGATGACTAATAAT
GTTGGTGAGCAAAGTGCTTCTCATGAGACGTCAGGATCTCCTTCTGTAGAAGCTGCTGCA
GTCGGGTTAGTTTCGTTAGTTCATGCTGAAGGCCTTACCCAAGGAGGATCCTATATGTCC
CCCAACCAGAGCTCAGATGAAGAAGTGGAGGACAGCGTGGAGAGAGAGGAGTGGTTGGAA
TCATCTCCCGGTTTTGATGTTCTTGTTGATGATAGATTAGTAGGTTTGAGTCACGAAGAT
GAACATAATTATCTGATGCACCATGATATGGAAGACAGGGAGCTTGATGAACGGTTCGCT
GGGTATGATTTTGAGAACCACCTCGAGTATGATCCTGCATATCCAAATATAGGAATTGTT
TCCGACGTAGAACAAAACGCTTCTTATTATAACTTTGAGAATCATGAAATGAATGAACGC
GTCGGAGAATTTCTTATCCCTGCTCATGGAAGAGAGAGGGTATCTCGTAAAAGAGAGTTG
CCTAGTGAACTGGCTTTTCGTGGCAGAGACAATGTTGACCTCCGGGACCTTCTGAAGAAG
CGACGAGCCAGTGAAAATGATTCTCCAGATCACTTGTCTAGAAGGTTTGACCTGTCTAGG
TCGAATGTCCATGAGCAAGGCAGCAGGGATAGGCATCGTCCACAGGGTTCCCAGTGGATG
CCTCAAAGAAGGGCTTCAAAAGTGGAAAGCAATGTTTCTTTCTCCCCCGCGTTTTTGAAC
CGCACTCGTCTGGAGGGTGCCAATCGGCTGAAAAGGTTGAGACAGTCTCAAGGAAGCAGT
TACAGACAGCAGCATTTCAAGGACAGGAGACGGGGCCAGTCGCGACCATTTGCAAATGAA
CCCCCTAGGAGGAGGATGGATTCTAGGAAGAGACTGACTGACGTTCCAGAGACGTTTAGT
GCACCCAAGACTCTAGCTCAGATTAGAGAAGAAAAGAGGAGAGGAAGAGAAGATGCAAAT
TCTCTCGAGGGAACTGGTCCATCTGGAGGAAGTGAGAAAGAAGACTTTTCAGGTCCAAAA
CCTCTCAGTGAAATCCTCAAAGACAAAAGAAGGCTGAGCTCAGTAGTGAGCAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400035911
PEP Infomation

pacid=37447504 transcript=PGSC0003DMT400053242 locus=PGSC0003DMG400020665 ID=PGSC0003DMT400053242.v4.03 annot-version=v4.03
Sequence

MEEEFQKRFTDCVYFLASPLTCKKGMECEYRHSEMARLNPRDCWYWVAGSCLNPTCAFRH
PPLESHAETSSELAPQPNKSDVPVNKTNMPCYFYFSGYCNKGERCAYLHGPDDGATAWTS
SKVASEVPDEPTAEMKKTFAGSETDLSAVEKHPNSSEMGPKEAAHEYINSEVDFHLMTNN
VGEQSASHETSGSPSVEAAAVGLVSLVHAEGLTQGGSYMSPNQSSDEEVEDSVEREEWLE
SSPGFDVLVDDRLVGLSHEDEHNYLMHHDMEDRELDERFAGYDFENHLEYDPAYPNIGIV
SDVEQNASYYNFENHEMNERVGEFLIPAHGRERVSRKRELPSELAFRGRDNVDLRDLLKK
RRASENDSPDHLSRRFDLSRSNVHEQGSRDRHRPQGSQWMPQRRASKVESNVSFSPAFLN
RTRLEGANRLKRLRQSQGSSYRQQHFKDRRRGQSRPFANEPPRRRMDSRKRLTDVPETFS
APKTLAQIREEKRRGREDANSLEGTGPSGGSEKEDFSGPKPLSEILKDKRRLSSVVSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400053242
Transcript Infomation

pacid=37447504 locus=PGSC0003DMG400020665 ID=PGSC0003DMT400053242.v4.03 annot-version=v4.03
Sequence

ATGGAGGAAGAATTTCAGAAGCGGTTTACTGATTGTGTGTATTTTTTAGCATCTCCCCTC
ACTTGTAAGAAGGGAATGGAATGTGAATATCGACATAGTGAGATGGCAAGGCTCAATCCC
AGGGATTGCTGGTACTGGGTGGCTGGAAGTTGTCTTAACCCAACATGTGCTTTTCGACAT
CCGCCATTAGAGAGCCATGCTGAGACGTCATCTGAATTGGCTCCTCAACCCAACAAATCT
GATGTGCCTGTTAACAAGACAAATATGCCTTGTTACTTCTATTTCAGTGGCTATTGCAAT
AAAGGTGAAAGATGCGCATATCTGCATGGACCTGATGACGGTGCAACTGCATGGACATCC
TCAAAAGTAGCTTCTGAAGTCCCTGATGAACCGACAGCTGAGATGAAGAAGACATTTGCA
GGAAGTGAAACTGATCTTTCAGCAGTCGAAAAACATCCCAATTCTTCAGAAATGGGGCCC
AAGGAAGCAGCACATGAATATATCAACTCAGAAGTGGATTTTCATTTGATGACTAATAAT
GTTGGTGAGCAAAGTGCTTCTCATGAGACGTCAGGATCTCCTTCTGTAGAAGCTGCTGCA
GTCGGGTTAGTTTCGTTAGTTCATGCTGAAGGCCTTACCCAAGGAGGATCCTATATGTCC
CCCAACCAGAGCTCAGATGAAGAAGTGGAGGACAGCGTGGAGAGAGAGGAGTGGTTGGAA
TCATCTCCCGGTTTTGATGTTCTTGTTGATGATAGATTAGTAGGTTTGAGTCACGAAGAT
GAACATAATTATCTGATGCACCATGATATGGAAGACAGGGAGCTTGATGAACGGTTCGCT
GGGTATGATTTTGAGAACCACCTCGAGTATGATCCTGCATATCCAAATATAGGAATTGTT
TCCGACGTAGAACAAAACGCTTCTTATTATAACTTTGAGAATCATGAAATGAATGAACGC
GTCGGAGAATTTCTTATCCCTGCTCATGGAAGAGAGAGGGTATCTCGTAAAAGAGAGTTG
CCTAGTGAACTGGCTTTTCGTGGCAGAGACAATGTTGACCTCCGGGACCTTCTGAAGAAG
CGACGAGCCAGTGAAAATGATTCTCCAGATCACTTGTCTAGAAGGTTTGACCTGTCTAGG
TCGAATGTCCATGAGCAAGGCAGCAGGGATAGGCATCGTCCACAGGGTTCCCAGTGGATG
CCTCAAAGAAGGGCTTCAAAAGTGGAAAGCAATGTTTCTTTCTCCCCCGCGTTTTTGAAC
CGCACTCGTCTGGAGGGTGCCAATCGGCTGAAAAGGTTGAGACAGTCTCAAGGAAGCAGT
TACAGACAGCAGCATTTCAAGGACAGGAGACGGGGCCAGTCGCGACCATTTGCAAATGAA
CCCCCTAGGAGGAGGATGGATTCTAGGAAGAGACTGACTGACGTTCCAGAGACGTTTAGT
GCACCCAAGACTCTAGCTCAGATTAGAGAAGAAAAGAGGAGAGGAAGAGAAGATGCAAAT
TCTCTCGAGGGAACTGGTCCATCTGGAGGAAGTGAGAAAGAAGACTTTTCAGGTCCAAAA
CCTCTCAGTGAAATCCTCAAAGACAAAAGAAGGCTGAGCTCAGTAGTGAGCAATTAG