Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053199
CDS Infomation

pacid=37452821 polypeptide=PGSC0003DMP400035877 locus=PGSC0003DMG400020648 ID=PGSC0003DMT400053199.v4.03 annot-version=v4.03
Sequence

ATGGCAAATGACAAAACCAACAGTTACGAAGAGGTCCGTAGGCAAAGGGTTCTGGACAAT
AAGAAACGATTTGAGGATCTGGGGATTTTGAATATATCTAAAAACCTTTCTGATATTACA
AAGTCCGAGAAGAAGTCCGACTATAAAACTGAGCTACGCCGAGTTAGACAAAAAGCAAAT
GATGTTTACATGTCGGAGCCAAGAAGGTCTGCACGGGCAAGGAATCCTGTTCCAACATAC
CGTGATGAAATTGATCTAGAGCTTCCATCTTTACGGAAGAGATCAAAATTCAACTCTTCA
TGGGCAAGTTATCTAGCAAGACCATTGGAAGAAGTGAAAGTTGCTTCATATGAAGAGAAA
GTACAAGCTTTAAAGTGTGCAGAAAAGCTCCAGAGTAATCTGCAGTCGGATAATCCATTT
TTTATCAAGACTATGGTTCGATCCCATGTCTACAGTTGTTTCTGGTTGGGACTTCCTACT
AGATTTTGTCAAGACCATCTTCCCAAATCTACTGTAGATGTTCTGCTAGTGGATGAAGAA
GGTTTAGAGTATGAAGCTCTCTTTATCGGCAAAAGAACTGGACTAAGTGGAGGATGGAGA
GCATTTGCACTTGATCATAAGCTGGATGATGGGGATGCTCTAGTATTTGAATTGGTCGAG
CCCACAAAATTCAAGGTCTACATTGTTCGAGCATCCCAATGTTCAAGTGAAGTGGATAAA
TCTAGTGCAGAAAAAGGAGAGAGTGAAGCTGAAGAAACACCAAAGAGTGAAAGAAAGAAA
AGAAAGAACAAATCAGAAGTTCCAACAATAGCTAAAGAAGAAGTCTCTGTAGTAGTGGCT
TCAGCCACGAGACGCAGTAGTAGAAGAAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035877
PEP Infomation

pacid=37452821 transcript=PGSC0003DMT400053199 locus=PGSC0003DMG400020648 ID=PGSC0003DMT400053199.v4.03 annot-version=v4.03
Sequence

MANDKTNSYEEVRRQRVLDNKKRFEDLGILNISKNLSDITKSEKKSDYKTELRRVRQKAN
DVYMSEPRRSARARNPVPTYRDEIDLELPSLRKRSKFNSSWASYLARPLEEVKVASYEEK
VQALKCAEKLQSNLQSDNPFFIKTMVRSHVYSCFWLGLPTRFCQDHLPKSTVDVLLVDEE
GLEYEALFIGKRTGLSGGWRAFALDHKLDDGDALVFELVEPTKFKVYIVRASQCSSEVDK
SSAEKGESEAEETPKSERKKRKNKSEVPTIAKEEVSVVVASATRRSSRRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400053199
Transcript Infomation

pacid=37452821 locus=PGSC0003DMG400020648 ID=PGSC0003DMT400053199.v4.03 annot-version=v4.03
Sequence

ATGGCAAATGACAAAACCAACAGTTACGAAGAGGTCCGTAGGCAAAGGGTTCTGGACAAT
AAGAAACGATTTGAGGATCTGGGGATTTTGAATATATCTAAAAACCTTTCTGATATTACA
AAGTCCGAGAAGAAGTCCGACTATAAAACTGAGCTACGCCGAGTTAGACAAAAAGCAAAT
GATGTTTACATGTCGGAGCCAAGAAGGTCTGCACGGGCAAGGAATCCTGTTCCAACATAC
CGTGATGAAATTGATCTAGAGCTTCCATCTTTACGGAAGAGATCAAAATTCAACTCTTCA
TGGGCAAGTTATCTAGCAAGACCATTGGAAGAAGTGAAAGTTGCTTCATATGAAGAGAAA
GTACAAGCTTTAAAGTGTGCAGAAAAGCTCCAGAGTAATCTGCAGTCGGATAATCCATTT
TTTATCAAGACTATGGTTCGATCCCATGTCTACAGTTGTTTCTGGTTGGGACTTCCTACT
AGATTTTGTCAAGACCATCTTCCCAAATCTACTGTAGATGTTCTGCTAGTGGATGAAGAA
GGTTTAGAGTATGAAGCTCTCTTTATCGGCAAAAGAACTGGACTAAGTGGAGGATGGAGA
GCATTTGCACTTGATCATAAGCTGGATGATGGGGATGCTCTAGTATTTGAATTGGTCGAG
CCCACAAAATTCAAGGTCTACATTGTTCGAGCATCCCAATGTTCAAGTGAAGTGGATAAA
TCTAGTGCAGAAAAAGGAGAGAGTGAAGCTGAAGAAACACCAAAGAGTGAAAGAAAGAAA
AGAAAGAACAAATCAGAAGTTCCAACAATAGCTAAAGAAGAAGTCTCTGTAGTAGTGGCT
TCAGCCACGAGACGCAGTAGTAGAAGAAAGTAA