Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053182
CDS Infomation

pacid=37450974 polypeptide=PGSC0003DMP400035865 locus=PGSC0003DMG400020643 ID=PGSC0003DMT400053182.v4.03 annot-version=v4.03
Sequence

ATGAGTAGCACCGGAGCGACAAACCAAAAGAAAAATCCAAACTCCAAAGAAGAAGCTGTA
TATAAGTTTCTTGCAAAATTAGGGCACACGGAGATACAGCCATTGAAAAAGATGAAGAGA
ATTTCTCTGCGGAGTTGCAATGGTATTCCCTTTATCTCTTCCATCTCTGGTTCGGCATTT
ACATTTAGAGCTTGTTCTTCATGCCATTACAGTAACAAATCAATTTCAGTAAAGGATAAA
CTTGGTGTAAATAGTGGCAATTTAGATGATGCTGTTACTCTCTTCCATCAAATGGTTAGA
ATGAAGCCTCTTCCTTCAGTTGTCGATTTCTCTAAATTGTTTAAGACTATGATAAGTATG
AAGCATTACTCACCTGTCCTTTCTCTTTTCCGACAAATGTGGAAATTGGGCATTCCAATT
AATGGGTTCATCTTGACTAGTGTGATTAATAGTTATTGCCTGATGCATCGTGCTGATTTT
GGATTTTCGGTGTTACCTATTTACTTGAAGAATGGCATTCCGTTTAATAGTGTTACCTTT
ACAACTCTAATAAGGGGAATCTTTGCTGAAAATAAGGTTAAAGATGCTGTTGAATTGTTC
AAAAAATTGGTGAGAGAGAAGATTTGTGATCCCGATGAAATCATGTATGCAACAGTAATG
AATGGGCTCAGCAAAAGGGGTCATACTCAGAAGACTTTAAGTTTGCTCCGGTTAATGGAA
CAAGGTAATACTGAGCCCAACATATATATCTACAACATTGTTATAGACGCTCTTTGCAAA
GATGGAAACTTAGATGCTGCTATCAACATTCTGAACGAGATGAAGCAGAAAGACGTTCTT
CCAAACATAGTCACATATAATTCAATAATTGATGGTTTGTGTAAGCTCGATGGACTATGC
AAAGCAGGGAAAGTCAAAGATGCTGAGGAAGTAATGAAACACATGGGTCGAAAAAGGGGT
GTAGAGCCTAATACAATCACCTACAATGCATTGATGGATGGATATTGTTTGCGTGGTCAA
CTAGATAGAGCAAGGAGAATTTTTAGTATCATGATAGATAAGGGCATTGAGACCGACATT
ATTAGCTATAACATACTAATAAAGGGATACTGTAAGAAAAAGAAAGTGGATGAGGCCATG
CAATTGTTTTGTGAAATTTCTCAAAAGGGATCAAAACCCAATAATTTGACCTACAATACG
ATCTTGCAAGGTCTTTCTGAAGTTGGAAGAACTGGTGATGCAAAGCAAATTTACGCTGAG
ATGCTATCTGCAGGGACCAAGCCTGATATATACAGTCATGTCACTTTGCTCAATGGTTAT
TATAAGTACGGACTTGTTGAAGAAGCTATGGCACTCTTTAATAAGTTAGAAAGAAACAAA
GAGTATACTAATATTGCATTTTATAGTGTTGTCATTAACGGATTGTGCAAAAATGGTAAA
CTCCACGAAGCGCATGCTGTTTTCAAGAAGCTTTCTTTCATTGGATTACTCCCGGATGTG
ATAACATACACTATAATGATTAATGGATTTTGTCTTGAAGGGTTGTTTGATGAAGCTAAA
TATATTCTAAGAAAAATGGAAGACAACGGTTGTTCTCCAAACAATGTCACTTATAATGTT
ATTGTGAAAGGATTTCTCAGGTGCAACAAAATTAGTGAAATGGCATCTTTTATGAAGGAA
ATGGATGGAAGGGGCTTCTCATTTGATGCAACTACAACTGGTTTTTTGATAGATGTTGTA
AGGGAGAATCCTTCTGTCCTTGACATGATACCAGAGCTTCACTCAAAAAATAAGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035865
PEP Infomation

pacid=37450974 transcript=PGSC0003DMT400053182 locus=PGSC0003DMG400020643 ID=PGSC0003DMT400053182.v4.03 annot-version=v4.03
Sequence

MSSTGATNQKKNPNSKEEAVYKFLAKLGHTEIQPLKKMKRISLRSCNGIPFISSISGSAF
TFRACSSCHYSNKSISVKDKLGVNSGNLDDAVTLFHQMVRMKPLPSVVDFSKLFKTMISM
KHYSPVLSLFRQMWKLGIPINGFILTSVINSYCLMHRADFGFSVLPIYLKNGIPFNSVTF
TTLIRGIFAENKVKDAVELFKKLVREKICDPDEIMYATVMNGLSKRGHTQKTLSLLRLME
QGNTEPNIYIYNIVIDALCKDGNLDAAINILNEMKQKDVLPNIVTYNSIIDGLCKLDGLC
KAGKVKDAEEVMKHMGRKRGVEPNTITYNALMDGYCLRGQLDRARRIFSIMIDKGIETDI
ISYNILIKGYCKKKKVDEAMQLFCEISQKGSKPNNLTYNTILQGLSEVGRTGDAKQIYAE
MLSAGTKPDIYSHVTLLNGYYKYGLVEEAMALFNKLERNKEYTNIAFYSVVINGLCKNGK
LHEAHAVFKKLSFIGLLPDVITYTIMINGFCLEGLFDEAKYILRKMEDNGCSPNNVTYNV
IVKGFLRCNKISEMASFMKEMDGRGFSFDATTTGFLIDVVRENPSVLDMIPELHSKNKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400053182
Transcript Infomation

pacid=37450974 locus=PGSC0003DMG400020643 ID=PGSC0003DMT400053182.v4.03 annot-version=v4.03
Sequence

ATGAGTAGCACCGGAGCGACAAACCAAAAGAAAAATCCAAACTCCAAAGAAGAAGCTGTA
TATAAGTTTCTTGCAAAATTAGGGCACACGGAGATACAGCCATTGAAAAAGATGAAGAGA
ATTTCTCTGCGGAGTTGCAATGGTATTCCCTTTATCTCTTCCATCTCTGGTTCGGCATTT
ACATTTAGAGCTTGTTCTTCATGCCATTACAGTAACAAATCAATTTCAGTAAAGGATAAA
CTTGGTGTAAATAGTGGCAATTTAGATGATGCTGTTACTCTCTTCCATCAAATGGTTAGA
ATGAAGCCTCTTCCTTCAGTTGTCGATTTCTCTAAATTGTTTAAGACTATGATAAGTATG
AAGCATTACTCACCTGTCCTTTCTCTTTTCCGACAAATGTGGAAATTGGGCATTCCAATT
AATGGGTTCATCTTGACTAGTGTGATTAATAGTTATTGCCTGATGCATCGTGCTGATTTT
GGATTTTCGGTGTTACCTATTTACTTGAAGAATGGCATTCCGTTTAATAGTGTTACCTTT
ACAACTCTAATAAGGGGAATCTTTGCTGAAAATAAGGTTAAAGATGCTGTTGAATTGTTC
AAAAAATTGGTGAGAGAGAAGATTTGTGATCCCGATGAAATCATGTATGCAACAGTAATG
AATGGGCTCAGCAAAAGGGGTCATACTCAGAAGACTTTAAGTTTGCTCCGGTTAATGGAA
CAAGGTAATACTGAGCCCAACATATATATCTACAACATTGTTATAGACGCTCTTTGCAAA
GATGGAAACTTAGATGCTGCTATCAACATTCTGAACGAGATGAAGCAGAAAGACGTTCTT
CCAAACATAGTCACATATAATTCAATAATTGATGGTTTGTGTAAGCTCGATGGACTATGC
AAAGCAGGGAAAGTCAAAGATGCTGAGGAAGTAATGAAACACATGGGTCGAAAAAGGGGT
GTAGAGCCTAATACAATCACCTACAATGCATTGATGGATGGATATTGTTTGCGTGGTCAA
CTAGATAGAGCAAGGAGAATTTTTAGTATCATGATAGATAAGGGCATTGAGACCGACATT
ATTAGCTATAACATACTAATAAAGGGATACTGTAAGAAAAAGAAAGTGGATGAGGCCATG
CAATTGTTTTGTGAAATTTCTCAAAAGGGATCAAAACCCAATAATTTGACCTACAATACG
ATCTTGCAAGGTCTTTCTGAAGTTGGAAGAACTGGTGATGCAAAGCAAATTTACGCTGAG
ATGCTATCTGCAGGGACCAAGCCTGATATATACAGTCATGTCACTTTGCTCAATGGTTAT
TATAAGTACGGACTTGTTGAAGAAGCTATGGCACTCTTTAATAAGTTAGAAAGAAACAAA
GAGTATACTAATATTGCATTTTATAGTGTTGTCATTAACGGATTGTGCAAAAATGGTAAA
CTCCACGAAGCGCATGCTGTTTTCAAGAAGCTTTCTTTCATTGGATTACTCCCGGATGTG
ATAACATACACTATAATGATTAATGGATTTTGTCTTGAAGGGTTGTTTGATGAAGCTAAA
TATATTCTAAGAAAAATGGAAGACAACGGTTGTTCTCCAAACAATGTCACTTATAATGTT
ATTGTGAAAGGATTTCTCAGGTGCAACAAAATTAGTGAAATGGCATCTTTTATGAAGGAA
ATGGATGGAAGGGGCTTCTCATTTGATGCAACTACAACTGGTTTTTTGATAGATGTTGTA
AGGGAGAATCCTTCTGTCCTTGACATGATACCAGAGCTTCACTCAAAAAATAAGAAGTGA