Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053158
CDS Infomation

pacid=37473319 polypeptide=PGSC0003DMP400035847 locus=PGSC0003DMG400020629 ID=PGSC0003DMT400053158.v4.03 annot-version=v4.03
Sequence

ATGGTTGCTGCTGCATATCACCAAGCAATATGCTTCACTGCCAACGAGGGTGCTAGGGAC
TTCCTGGTCACATCTTCATCTGGGAGTCTTAAAATGAAACCAGTGTTTAGAAAAGAGAGA
TGCAGTTTGAGGCAGTATGTAAACTGTGTGAAGTATTCATCAGAGTCACCTTTATGTGCT
ATTAAGCCAATTTTCTCCTCATTATCAAGTACCAATGATTCACGGAGAACAGTACCTGAA
TCATACTTGATCTTAATACGGCATGGAGAATCAATGTGGAATGAAAAGAACCTGTTCACT
GGTTGTGTAGATGTGCCACTCACCACTAAAGGCGTTGATGAAGCAATTGAAGCCGGTAAG
AGAATTAGACACTTACCCATTGATGTTGTCTACATCTCTGCATTGATTCGTTCTCAGATG
ACAGCCATGCTTGCCCTAACAGAGCACCACTGCAAGAAGGTGCCCATTATTGTACACGAT
GAGACTGAACAAGCCAAAGTATGGAGTCAAATTTATAGTGAAGGCACCGAGATGCAGTCT
GTTCCTGTTATTAAAGCATGGCAACTGAATGAAAGAATGTACGGGGAACTTCAAGGGTTT
AATAAGCTGGAAACAGCTGAAAGATGCGGAAAAGAGCAAGTCTATAAATGGCGCCGAAGC
TATGATGCTCGACCACCCAACGGTGAGAGCTTGGAAATGTGCTTGCGAAGAGCTGTTACC
TATTTTAAAGAGCAAATTGAACCCCAACTTTCCAGTGGAAAGAATGTAATGGTAGTAGCT
CATGCAAATTCATTGAGGTCCATCCTAATGTATCTCGATAAATTGACTGCTGAGGAGGTC
ATCCACTTAGAACTCTCAACTGGAGTGCCAATGCTTTACATATATAGAGAAAATCAATTC
ATCAGGAGAGGAAGTCCCTTGGGATCTACGGAGGATGGAGTTTATGCTTATACAGAGAAT
TTGGCCTTATACAAGCAAAATCTGTTAGATGAAGTGTTAGATGAAGTGTCTTTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400035847
PEP Infomation

pacid=37473319 transcript=PGSC0003DMT400053158 locus=PGSC0003DMG400020629 ID=PGSC0003DMT400053158.v4.03 annot-version=v4.03
Sequence

MVAAAYHQAICFTANEGARDFLVTSSSGSLKMKPVFRKERCSLRQYVNCVKYSSESPLCA
IKPIFSSLSSTNDSRRTVPESYLILIRHGESMWNEKNLFTGCVDVPLTTKGVDEAIEAGK
RIRHLPIDVVYISALIRSQMTAMLALTEHHCKKVPIIVHDETEQAKVWSQIYSEGTEMQS
VPVIKAWQLNERMYGELQGFNKLETAERCGKEQVYKWRRSYDARPPNGESLEMCLRRAVT
YFKEQIEPQLSSGKNVMVVAHANSLRSILMYLDKLTAEEVIHLELSTGVPMLYIYRENQF
IRRGSPLGSTEDGVYAYTENLALYKQNLLDEVLDEVSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400053158
Transcript Infomation

pacid=37473319 locus=PGSC0003DMG400020629 ID=PGSC0003DMT400053158.v4.03 annot-version=v4.03
Sequence

ATGGTTGCTGCTGCATATCACCAAGCAATATGCTTCACTGCCAACGAGGGTGCTAGGGAC
TTCCTGGTCACATCTTCATCTGGGAGTCTTAAAATGAAACCAGTGTTTAGAAAAGAGAGA
TGCAGTTTGAGGCAGTATGTAAACTGTGTGAAGTATTCATCAGAGTCACCTTTATGTGCT
ATTAAGCCAATTTTCTCCTCATTATCAAGTACCAATGATTCACGGAGAACAGTACCTGAA
TCATACTTGATCTTAATACGGCATGGAGAATCAATGTGGAATGAAAAGAACCTGTTCACT
GGTTGTGTAGATGTGCCACTCACCACTAAAGGCGTTGATGAAGCAATTGAAGCCGGTAAG
AGAATTAGACACTTACCCATTGATGTTGTCTACATCTCTGCATTGATTCGTTCTCAGATG
ACAGCCATGCTTGCCCTAACAGAGCACCACTGCAAGAAGGTGCCCATTATTGTACACGAT
GAGACTGAACAAGCCAAAGTATGGAGTCAAATTTATAGTGAAGGCACCGAGATGCAGTCT
GTTCCTGTTATTAAAGCATGGCAACTGAATGAAAGAATGTACGGGGAACTTCAAGGGTTT
AATAAGCTGGAAACAGCTGAAAGATGCGGAAAAGAGCAAGTCTATAAATGGCGCCGAAGC
TATGATGCTCGACCACCCAACGGTGAGAGCTTGGAAATGTGCTTGCGAAGAGCTGTTACC
TATTTTAAAGAGCAAATTGAACCCCAACTTTCCAGTGGAAAGAATGTAATGGTAGTAGCT
CATGCAAATTCATTGAGGTCCATCCTAATGTATCTCGATAAATTGACTGCTGAGGAGGTC
ATCCACTTAGAACTCTCAACTGGAGTGCCAATGCTTTACATATATAGAGAAAATCAATTC
ATCAGGAGAGGAAGTCCCTTGGGATCTACGGAGGATGGAGTTTATGCTTATACAGAGAAT
TTGGCCTTATACAAGCAAAATCTGTTAGATGAAGTGTTAGATGAAGTGTCTTTATAA