Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053154
CDS Infomation

pacid=37472970 polypeptide=PGSC0003DMP400035844 locus=PGSC0003DMG400020627 ID=PGSC0003DMT400053154.v4.03 annot-version=v4.03
Sequence

ATGGGTGCGGCAAGCTCAAAATCTGAGAGGAGTGAAGCTCTGAGATTGTGTAAAGAAAGG
AAAAGATTTATAAAACAAGCAGTCGATTCTAGGTATGCACTAGCAGCTGCTCATGTTTCG
TATGTTGAATCTTTGAGAAATATAGGCATTGCTCTTAGGAGATATGCGGAGGCTGAAGTG
TTGATAGAATCATCTCTATCAACTTCAGCTACTGAGCTTGATAAAACTCCGTCACATTCG
TCGTATCCATCACCTTCACCATCTCACGTTGGTGGGGTTTCAGATTCTCCTGTTCTAAAT
GGAAGTCCCCTTTCACCTCCTATTGCTACTAGGTTGAGTTACATGCGGTCTGCTGGACCT
ACTGCTGTCACTGTTAAGGTGAGTCCACCTTCAACCAATATGTATGTAGATGATGTTGAT
TTCTTAACCCCATTACCCCCACCCCCACCGCCAGATTCAGGGTCTTGGGATTTTTTTGAC
CCTACAGATAATGAGAGCTTTAGGTTTGTTACACATAATGGTAGGCAACTGAACTTTGAT
GAACTTGGTGAAAAAGATAATGAGGGTGACAATGGGATTCAAGAAGAGTTCTTGACACCT
AAATCTGAACCTAGAAGCAATAATGGTCATGGTAAATTGGAATTTCATGATTCTAGTTCA
GTTATGCCTAAGAGGGCTGAGAATAATAGTCAGCAAGTAGCTGGTGGTGAGGGTAATAAC
GTGAGCAGTGAGCCGAAAGCAAATGGTTCAGTTGGGACTACGATTGGGAAATCTGCCTTG
CAAGTATCTGGTTCAAAGGGAGACAAGCCTTTAGTGGATGAAAGAGAGGATCCTTCAGAG
TTCATAACTCATAGAGCCAAAGATTTTCTTTCTAGCATAAAGGACATTGAACATCGATTC
TTTAGAGCATCTGAATCCGGAAAAGAGATTTCAAGAATGCTCGAAGCTAGCAAAATCAGA
GTTGGGTTTTCTGAGGCCAAAGGAAAATCTTCGGTGTCCGCCTATTTGTCTTCTATGGGC
TCAGGTTGCTGCAGAAGAGTGGGTGAGAACATGGCTGGTGAAGCAGACCATGTAACAAAG
GTGATTATCTGGAAGAGGACCACATCCTCTAGATCATCTTCATCAAGGAATCCTCTTAAT
AGCAAGGATGACAATGATGATAGTGGAAGTGATTTTGTCGAAGATTTTTGTATGATAGCT
GGAAGCCACTCATCCACCCTTGACAGAGTATATGCATGGGAGAGGAAACTCTATGATGAA
GTGAAGACGATTGAGTCAATCAGGAGAGATTATGATCGGAAGTGTAACCAACTTAGGCAT
CAATTTGCCAAAGATGTTAGTGCCCAAATAATTGACAAAACACGGTCAGTGGTGAAGGAT
CTCCATTCACGCATCAGGGTGGCTCTATATTCAGTTGATTCAATATCAAAGCGGATAGAG
AAAATGAGGGATGAAGAGTTGTTGCCTCAAATTTTGGAACTTATCCAAGGATTGATCAGA
ATGTGGAGAGCGATGCTTGAATGCCATCATGCTCAGTATATAACCATTTCTCTAGCATAC
CATGCCAAAGCTTCGGCTTCTAGTCCCCAGGGTGATGCTCAAAAGCTGATTATGAGTCGG
CTGCAGGATGAAGTAGAGTGCTTTGGCTTGAGTTTTGCCAACTGGATTAACAGCCATACT
TCATATGTGGAAGCTCTTAACAGCTGGCTGCAAAACTGCATCCTGCAACCACGTGAGCGA
ACCAAAGGCAGAAGAGCATTTTCCCCTCGACGAGTTTTAGCCCCACCAATATTTGTGCTT
TGTCGTGACTGGTCCACTGGGATTAAATCTCTGCCTTCTGAAGAGCTTAGTGATGCCATC
AAGGAATTCTTGTATGACCTGCGGCATTCAGTTGGACACCACTCCGAGGAACTGCAAAAG
AAAGAAACTACTCCTGAACCAGGGAATGAGGAATTGGAAGTGAAAGATGAAGAGAAGAAC
GATGATAAGTCATCAAATTTGAATTGCATTCACTCGAGTTTAACAAAGGTTCTGGACCGT
CTGACCAAGTTCTCGGAGGCTTCTTTAAAGATGTGTGAAGATATCAGGCAGAAATGCGAT
ACAGCTCGAAATGCATATCTGAACTATCGACCAGCACCAAGATCCTTTAGTATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400035844
PEP Infomation

pacid=37472970 transcript=PGSC0003DMT400053154 locus=PGSC0003DMG400020627 ID=PGSC0003DMT400053154.v4.03 annot-version=v4.03
Sequence

MGAASSKSERSEALRLCKERKRFIKQAVDSRYALAAAHVSYVESLRNIGIALRRYAEAEV
LIESSLSTSATELDKTPSHSSYPSPSPSHVGGVSDSPVLNGSPLSPPIATRLSYMRSAGP
TAVTVKVSPPSTNMYVDDVDFLTPLPPPPPPDSGSWDFFDPTDNESFRFVTHNGRQLNFD
ELGEKDNEGDNGIQEEFLTPKSEPRSNNGHGKLEFHDSSSVMPKRAENNSQQVAGGEGNN
VSSEPKANGSVGTTIGKSALQVSGSKGDKPLVDEREDPSEFITHRAKDFLSSIKDIEHRF
FRASESGKEISRMLEASKIRVGFSEAKGKSSVSAYLSSMGSGCCRRVGENMAGEADHVTK
VIIWKRTTSSRSSSSRNPLNSKDDNDDSGSDFVEDFCMIAGSHSSTLDRVYAWERKLYDE
VKTIESIRRDYDRKCNQLRHQFAKDVSAQIIDKTRSVVKDLHSRIRVALYSVDSISKRIE
KMRDEELLPQILELIQGLIRMWRAMLECHHAQYITISLAYHAKASASSPQGDAQKLIMSR
LQDEVECFGLSFANWINSHTSYVEALNSWLQNCILQPRERTKGRRAFSPRRVLAPPIFVL
CRDWSTGIKSLPSEELSDAIKEFLYDLRHSVGHHSEELQKKETTPEPGNEELEVKDEEKN
DDKSSNLNCIHSSLTKVLDRLTKFSEASLKMCEDIRQKCDTARNAYLNYRPAPRSFSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400053154
Transcript Infomation

pacid=37472970 locus=PGSC0003DMG400020627 ID=PGSC0003DMT400053154.v4.03 annot-version=v4.03
Sequence

ATGGGTGCGGCAAGCTCAAAATCTGAGAGGAGTGAAGCTCTGAGATTGTGTAAAGAAAGG
AAAAGATTTATAAAACAAGCAGTCGATTCTAGGTATGCACTAGCAGCTGCTCATGTTTCG
TATGTTGAATCTTTGAGAAATATAGGCATTGCTCTTAGGAGATATGCGGAGGCTGAAGTG
TTGATAGAATCATCTCTATCAACTTCAGCTACTGAGCTTGATAAAACTCCGTCACATTCG
TCGTATCCATCACCTTCACCATCTCACGTTGGTGGGGTTTCAGATTCTCCTGTTCTAAAT
GGAAGTCCCCTTTCACCTCCTATTGCTACTAGGTTGAGTTACATGCGGTCTGCTGGACCT
ACTGCTGTCACTGTTAAGGTGAGTCCACCTTCAACCAATATGTATGTAGATGATGTTGAT
TTCTTAACCCCATTACCCCCACCCCCACCGCCAGATTCAGGGTCTTGGGATTTTTTTGAC
CCTACAGATAATGAGAGCTTTAGGTTTGTTACACATAATGGTAGGCAACTGAACTTTGAT
GAACTTGGTGAAAAAGATAATGAGGGTGACAATGGGATTCAAGAAGAGTTCTTGACACCT
AAATCTGAACCTAGAAGCAATAATGGTCATGGTAAATTGGAATTTCATGATTCTAGTTCA
GTTATGCCTAAGAGGGCTGAGAATAATAGTCAGCAAGTAGCTGGTGGTGAGGGTAATAAC
GTGAGCAGTGAGCCGAAAGCAAATGGTTCAGTTGGGACTACGATTGGGAAATCTGCCTTG
CAAGTATCTGGTTCAAAGGGAGACAAGCCTTTAGTGGATGAAAGAGAGGATCCTTCAGAG
TTCATAACTCATAGAGCCAAAGATTTTCTTTCTAGCATAAAGGACATTGAACATCGATTC
TTTAGAGCATCTGAATCCGGAAAAGAGATTTCAAGAATGCTCGAAGCTAGCAAAATCAGA
GTTGGGTTTTCTGAGGCCAAAGGAAAATCTTCGGTGTCCGCCTATTTGTCTTCTATGGGC
TCAGGTTGCTGCAGAAGAGTGGGTGAGAACATGGCTGGTGAAGCAGACCATGTAACAAAG
GTGATTATCTGGAAGAGGACCACATCCTCTAGATCATCTTCATCAAGGAATCCTCTTAAT
AGCAAGGATGACAATGATGATAGTGGAAGTGATTTTGTCGAAGATTTTTGTATGATAGCT
GGAAGCCACTCATCCACCCTTGACAGAGTATATGCATGGGAGAGGAAACTCTATGATGAA
GTGAAGACGATTGAGTCAATCAGGAGAGATTATGATCGGAAGTGTAACCAACTTAGGCAT
CAATTTGCCAAAGATGTTAGTGCCCAAATAATTGACAAAACACGGTCAGTGGTGAAGGAT
CTCCATTCACGCATCAGGGTGGCTCTATATTCAGTTGATTCAATATCAAAGCGGATAGAG
AAAATGAGGGATGAAGAGTTGTTGCCTCAAATTTTGGAACTTATCCAAGGATTGATCAGA
ATGTGGAGAGCGATGCTTGAATGCCATCATGCTCAGTATATAACCATTTCTCTAGCATAC
CATGCCAAAGCTTCGGCTTCTAGTCCCCAGGGTGATGCTCAAAAGCTGATTATGAGTCGG
CTGCAGGATGAAGTAGAGTGCTTTGGCTTGAGTTTTGCCAACTGGATTAACAGCCATACT
TCATATGTGGAAGCTCTTAACAGCTGGCTGCAAAACTGCATCCTGCAACCACGTGAGCGA
ACCAAAGGCAGAAGAGCATTTTCCCCTCGACGAGTTTTAGCCCCACCAATATTTGTGCTT
TGTCGTGACTGGTCCACTGGGATTAAATCTCTGCCTTCTGAAGAGCTTAGTGATGCCATC
AAGGAATTCTTGTATGACCTGCGGCATTCAGTTGGACACCACTCCGAGGAACTGCAAAAG
AAAGAAACTACTCCTGAACCAGGGAATGAGGAATTGGAAGTGAAAGATGAAGAGAAGAAC
GATGATAAGTCATCAAATTTGAATTGCATTCACTCGAGTTTAACAAAGGTTCTGGACCGT
CTGACCAAGTTCTCGGAGGCTTCTTTAAAGATGTGTGAAGATATCAGGCAGAAATGCGAT
ACAGCTCGAAATGCATATCTGAACTATCGACCAGCACCAAGATCCTTTAGTATATGA