Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053145
CDS Infomation

pacid=37474836 polypeptide=PGSC0003DMP400035836 locus=PGSC0003DMG400020620 ID=PGSC0003DMT400053145.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTCAACAGATCAGCTCAAAGTGTCTCCAAAACAGTGAAGAAACGGCGGAAGTG
GTGAACCGGCGAATCAATCTGCTGACGTTGCATTTGAACCCGGTTCAGGACACCCCGGTT
CAGGAATTGGAGCTGCTAAGATGCGCAGGGAAGATGAAGGTGATTAAGGTGAGCACGGAG
ACGCTGTCGGAGTACATGAGAGGGAAACATAGGGATATACAGGAAGAAGTATTTGCTTAC
TTTAATTCAAGACCGGAACTTCAAACACCGATTGAGATATCGAAAGATGAACATAGGGAA
TTGTGCATGAAACAGCTTGTGGGTTTGGTAAGGGAAGGTGGAATTAGGCCATTTAGGTAT
GTGGTTGACGATCCGGCTAAGTATTTTGCGATTGCTGAAGCTGTGGGAAGCGTTGACATG
TCACTTGGCATCAAAATGGGTGTTCAGTACAGTCTATGGGGAGGTTCTGTTATCAACTTG
GGAACTAAAAAGCACAGAGACAAATACTTTGACAGTATAGACAATGTGGACTACCCGGGA
TGCTTTGCAATGACGGAGCTTCATCATGGTTCAAATGTCCAAGGTCTTCAGACAGTTGCC
ACCTTTGATCCACTCACAGATGAATTCATAATTGACACGCCAAATGATGGGGCTATTAAA
TGGTGGATTGGTAATGCTGCCGTTCATGGGAAGTTTGCAACAGTTTTTGCAAGACTGATG
TTACCAACTCATGATACAAAAGGTGTTACTGACATGGGTGTTCATGCATTTATTGTTCCG
ATAAGGGATATGAAAACCCACAAAACACTGCCAGGGGTTGAAATACATGATTGTGGCCAT
AAAGTTGGCTTGAATGGAGTAGATAATGGTGCGTTGAGATTCCGTTCAGTAAGAATTCCA
CGAGATAACCTTCTTAATCGATTTGGAGATGTTTCACGGGATGGGAGATACACCAGCAGC
CTGCCTACAATTAGCAAAAGATTTGCTGCCACACTTGGAGAACTTGTTGGTGGTAGAGTT
GGCCTTGCGTATTCATCTGTGGGTGTTCTCAAGATTGCTGTTGTTATTGCAACAAGATAT
TCTCTTCTGCGCCAGCAATTCGGTCCTCCTAAACAACCAGAAGTTAGTATACTTGACTAC
CAATCTCAGCAGCACAAGCTTATGCCGATGTTGGCTTCAACCTACGCATTCCATTTTGCC
ACACTTCATCTGGTGGAAAAATATTCTGAAATGAAGAAGTCTCATGATGAGGAACTGATA
GGGGACGTACATGCACTTTCTGCAGGGCTTAAGGCCTATATCACTTCTTACACAGCAAAG
TCATTGAGCACATGTAGAGAAGCTTGTGGTGGCCATGGTTATGCCGCTGTCAATAGGTTT
GGAAGTTTGAGGAATGATCATGACATATTTCAGACATTTGAGGGAGACAATACTGTTCTT
CTGCAGCAGGTAGCCGGTCTTCTGTTGAAGCAGTACAGGGAGAAATTCCAAGGTGGGACG
CTCACTGTCACATGGAACTACCTAAGACAATCCATGAATTCTTACCTTGCTCAGCCTAAC
CCGGTAACTGCTAGATGGGAAAGTGAAGATCACTTACGCAATCCTAACTTCCAGTTGGAT
GCTTTTAGGTATCGTACGTCAAGGTTGCTTCAAAGTGTAGCTATCCGGCTTCAGAAGCAC
TCCAAGACTCTTGGAGGATTTGGTGCTTGGAATAGATGTTTAAATCACCTGTTGACACTT
GCAGAGTCTCATATTGAATCGTTCATTCTTGAAAAGTTCATTGAAGCAGTTAAAAATTGT
CCTGATGAAAACTCTCGTGCTGCCTTAAAACTCGTGTGCGATCTATATGCCTTGGATAGA
ATCTGGAATGACATAGGAACTTACCGCAATGTGGACTACGTGGCCCCTAACAAAGCTAAG
GCAATTCACAAGCTAGCAGATTATCTATGCTTCCAAGTTAAGAATATCGCAAGGGAACTT
GTTGATGCCTTTGATCTTCCAGATTATGTTACGCGTGCTCCAATTGGTGTGCAGACTCCA
TCAGAAGCTTATACGCAGTATACTCAGAATGTTGGGTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400035836
PEP Infomation

pacid=37474836 transcript=PGSC0003DMT400053145 locus=PGSC0003DMG400020620 ID=PGSC0003DMT400053145.v4.03 annot-version=v4.03
Sequence

MELQQISSKCLQNSEETAEVVNRRINLLTLHLNPVQDTPVQELELLRCAGKMKVIKVSTE
TLSEYMRGKHRDIQEEVFAYFNSRPELQTPIEISKDEHRELCMKQLVGLVREGGIRPFRY
VVDDPAKYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDSIDNVDYPG
CFAMTELHHGSNVQGLQTVATFDPLTDEFIIDTPNDGAIKWWIGNAAVHGKFATVFARLM
LPTHDTKGVTDMGVHAFIVPIRDMKTHKTLPGVEIHDCGHKVGLNGVDNGALRFRSVRIP
RDNLLNRFGDVSRDGRYTSSLPTISKRFAATLGELVGGRVGLAYSSVGVLKIAVVIATRY
SLLRQQFGPPKQPEVSILDYQSQQHKLMPMLASTYAFHFATLHLVEKYSEMKKSHDEELI
GDVHALSAGLKAYITSYTAKSLSTCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTVL
LQQVAGLLLKQYREKFQGGTLTVTWNYLRQSMNSYLAQPNPVTARWESEDHLRNPNFQLD
AFRYRTSRLLQSVAIRLQKHSKTLGGFGAWNRCLNHLLTLAESHIESFILEKFIEAVKNC
PDENSRAALKLVCDLYALDRIWNDIGTYRNVDYVAPNKAKAIHKLADYLCFQVKNIAREL
VDAFDLPDYVTRAPIGVQTPSEAYTQYTQNVGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400053145
Transcript Infomation

pacid=37474836 locus=PGSC0003DMG400020620 ID=PGSC0003DMT400053145.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTCAACAGATCAGCTCAAAGTGTCTCCAAAACAGTGAAGAAACGGCGGAAGTG
GTGAACCGGCGAATCAATCTGCTGACGTTGCATTTGAACCCGGTTCAGGACACCCCGGTT
CAGGAATTGGAGCTGCTAAGATGCGCAGGGAAGATGAAGGTGATTAAGGTGAGCACGGAG
ACGCTGTCGGAGTACATGAGAGGGAAACATAGGGATATACAGGAAGAAGTATTTGCTTAC
TTTAATTCAAGACCGGAACTTCAAACACCGATTGAGATATCGAAAGATGAACATAGGGAA
TTGTGCATGAAACAGCTTGTGGGTTTGGTAAGGGAAGGTGGAATTAGGCCATTTAGGTAT
GTGGTTGACGATCCGGCTAAGTATTTTGCGATTGCTGAAGCTGTGGGAAGCGTTGACATG
TCACTTGGCATCAAAATGGGTGTTCAGTACAGTCTATGGGGAGGTTCTGTTATCAACTTG
GGAACTAAAAAGCACAGAGACAAATACTTTGACAGTATAGACAATGTGGACTACCCGGGA
TGCTTTGCAATGACGGAGCTTCATCATGGTTCAAATGTCCAAGGTCTTCAGACAGTTGCC
ACCTTTGATCCACTCACAGATGAATTCATAATTGACACGCCAAATGATGGGGCTATTAAA
TGGTGGATTGGTAATGCTGCCGTTCATGGGAAGTTTGCAACAGTTTTTGCAAGACTGATG
TTACCAACTCATGATACAAAAGGTGTTACTGACATGGGTGTTCATGCATTTATTGTTCCG
ATAAGGGATATGAAAACCCACAAAACACTGCCAGGGGTTGAAATACATGATTGTGGCCAT
AAAGTTGGCTTGAATGGAGTAGATAATGGTGCGTTGAGATTCCGTTCAGTAAGAATTCCA
CGAGATAACCTTCTTAATCGATTTGGAGATGTTTCACGGGATGGGAGATACACCAGCAGC
CTGCCTACAATTAGCAAAAGATTTGCTGCCACACTTGGAGAACTTGTTGGTGGTAGAGTT
GGCCTTGCGTATTCATCTGTGGGTGTTCTCAAGATTGCTGTTGTTATTGCAACAAGATAT
TCTCTTCTGCGCCAGCAATTCGGTCCTCCTAAACAACCAGAAGTTAGTATACTTGACTAC
CAATCTCAGCAGCACAAGCTTATGCCGATGTTGGCTTCAACCTACGCATTCCATTTTGCC
ACACTTCATCTGGTGGAAAAATATTCTGAAATGAAGAAGTCTCATGATGAGGAACTGATA
GGGGACGTACATGCACTTTCTGCAGGGCTTAAGGCCTATATCACTTCTTACACAGCAAAG
TCATTGAGCACATGTAGAGAAGCTTGTGGTGGCCATGGTTATGCCGCTGTCAATAGGTTT
GGAAGTTTGAGGAATGATCATGACATATTTCAGACATTTGAGGGAGACAATACTGTTCTT
CTGCAGCAGGTAGCCGGTCTTCTGTTGAAGCAGTACAGGGAGAAATTCCAAGGTGGGACG
CTCACTGTCACATGGAACTACCTAAGACAATCCATGAATTCTTACCTTGCTCAGCCTAAC
CCGGTAACTGCTAGATGGGAAAGTGAAGATCACTTACGCAATCCTAACTTCCAGTTGGAT
GCTTTTAGGTATCGTACGTCAAGGTTGCTTCAAAGTGTAGCTATCCGGCTTCAGAAGCAC
TCCAAGACTCTTGGAGGATTTGGTGCTTGGAATAGATGTTTAAATCACCTGTTGACACTT
GCAGAGTCTCATATTGAATCGTTCATTCTTGAAAAGTTCATTGAAGCAGTTAAAAATTGT
CCTGATGAAAACTCTCGTGCTGCCTTAAAACTCGTGTGCGATCTATATGCCTTGGATAGA
ATCTGGAATGACATAGGAACTTACCGCAATGTGGACTACGTGGCCCCTAACAAAGCTAAG
GCAATTCACAAGCTAGCAGATTATCTATGCTTCCAAGTTAAGAATATCGCAAGGGAACTT
GTTGATGCCTTTGATCTTCCAGATTATGTTACGCGTGCTCCAATTGGTGTGCAGACTCCA
TCAGAAGCTTATACGCAGTATACTCAGAATGTTGGGTTCTAG