Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053144
CDS Infomation

pacid=37473612 polypeptide=PGSC0003DMP400035835 locus=PGSC0003DMG400020619 ID=PGSC0003DMT400053144.v4.03 annot-version=v4.03
Sequence

ATGACTCAGCAGAATGTGGTAGTATCTGATCCCAAATCCGGTATTAATCTGACAATACCG
GTATCGAACTCGTCGGCGTTATTCACGACGGCAGCTCAGAAGCCGCCGCCGGGGCCGGGG
CCGGGGAGTTGTATAACTATTTCAAGAAAGACACTTGTTGAAATTAATGGGAATAATAGT
GCTAGAATCAATTCTTGGGTTGAATCAATGAGAGCTTCCTCTCCTACTCATCATAAGTCC
AGTCCTGCTCTTTCAGATGACTTGAATTCTTGGATGGTGCAACATCCATCAGCACTGGAT
ATGTTTGAGCAGATAATCAGTGCTTCAAAGGGAAAACAAATTGTGATGTTTTTAGACTAT
GATGGCACTCTTTCCCCCATTGTTGAAGATCCTGATCAAGCTTTCATGTCTGATGCTATG
AGAGCAACAGTGAGAAAACTTGCTAGATATTTCCCTACTGCAATAGTGAGTGGAAGGTGC
AGAGACAAGGTATACAGCTTTGTACGATTGGCAGAGTTGTACTATGCTGGTAGCCATGGA
ATGGATATAAAAGGGCCATCAAAAGGTTCCAAATACAAGAAAGGAGCTCAAGCTGTTCTT
TTCCAACCAGCAAGTGAATTTCTCCCTATGATTGATGAGGTTTACAAAAAACTTGTAGAT
ATAACAAAGTCTACAGAAGGAGTTAGAGTTGAAAATAACAAGTTTTGTGCCTCTGTACAT
TTCCGCTGTGTTGATGAAAAGAAATGGGGTGAACTAGCACAAGTAGTAAGATCAGTGCTT
AAAGAATACCCAAAGCTTCGATTGACACAAGGAAGAAAAGTATTAGAGATTCGTCCAACT
ATTAAATGGGACAAGGGCAAAGCTCTCGAATTCTTGCTCGAATCACTTGGATATGCTAAC
TGTACTGATGTCTTTCCTGTATATATTGGTGATGATCGAACCGATGAAGATGCTTTCAAG
GTCCTAAGAGAAAGAGATCAAGGTTTTGGCATTCTTGTCTCCAAAACTCCAAAAGACACA
CACGCATCTTATTCTTTGCAAGAACCATCTGAGGTTATGGTGTTTCTACGACGTTTGGTA
GAGTGGAAAAAGTTGTCATTAAGAAGACAATTTCGAATTCGAAGACAAATTGAGGAGATG
AAAGCATCTCTAAGGAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035835
PEP Infomation

pacid=37473612 transcript=PGSC0003DMT400053144 locus=PGSC0003DMG400020619 ID=PGSC0003DMT400053144.v4.03 annot-version=v4.03
Sequence

MTQQNVVVSDPKSGINLTIPVSNSSALFTTAAQKPPPGPGPGSCITISRKTLVEINGNNS
ARINSWVESMRASSPTHHKSSPALSDDLNSWMVQHPSALDMFEQIISASKGKQIVMFLDY
DGTLSPIVEDPDQAFMSDAMRATVRKLARYFPTAIVSGRCRDKVYSFVRLAELYYAGSHG
MDIKGPSKGSKYKKGAQAVLFQPASEFLPMIDEVYKKLVDITKSTEGVRVENNKFCASVH
FRCVDEKKWGELAQVVRSVLKEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGYAN
CTDVFPVYIGDDRTDEDAFKVLRERDQGFGILVSKTPKDTHASYSLQEPSEVMVFLRRLV
EWKKLSLRRQFRIRRQIEEMKASLRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400053144
Transcript Infomation

pacid=37473612 locus=PGSC0003DMG400020619 ID=PGSC0003DMT400053144.v4.03 annot-version=v4.03
Sequence

ATGACTCAGCAGAATGTGGTAGTATCTGATCCCAAATCCGGTATTAATCTGACAATACCG
GTATCGAACTCGTCGGCGTTATTCACGACGGCAGCTCAGAAGCCGCCGCCGGGGCCGGGG
CCGGGGAGTTGTATAACTATTTCAAGAAAGACACTTGTTGAAATTAATGGGAATAATAGT
GCTAGAATCAATTCTTGGGTTGAATCAATGAGAGCTTCCTCTCCTACTCATCATAAGTCC
AGTCCTGCTCTTTCAGATGACTTGAATTCTTGGATGGTGCAACATCCATCAGCACTGGAT
ATGTTTGAGCAGATAATCAGTGCTTCAAAGGGAAAACAAATTGTGATGTTTTTAGACTAT
GATGGCACTCTTTCCCCCATTGTTGAAGATCCTGATCAAGCTTTCATGTCTGATGCTATG
AGAGCAACAGTGAGAAAACTTGCTAGATATTTCCCTACTGCAATAGTGAGTGGAAGGTGC
AGAGACAAGGTATACAGCTTTGTACGATTGGCAGAGTTGTACTATGCTGGTAGCCATGGA
ATGGATATAAAAGGGCCATCAAAAGGTTCCAAATACAAGAAAGGAGCTCAAGCTGTTCTT
TTCCAACCAGCAAGTGAATTTCTCCCTATGATTGATGAGGTTTACAAAAAACTTGTAGAT
ATAACAAAGTCTACAGAAGGAGTTAGAGTTGAAAATAACAAGTTTTGTGCCTCTGTACAT
TTCCGCTGTGTTGATGAAAAGAAATGGGGTGAACTAGCACAAGTAGTAAGATCAGTGCTT
AAAGAATACCCAAAGCTTCGATTGACACAAGGAAGAAAAGTATTAGAGATTCGTCCAACT
ATTAAATGGGACAAGGGCAAAGCTCTCGAATTCTTGCTCGAATCACTTGGATATGCTAAC
TGTACTGATGTCTTTCCTGTATATATTGGTGATGATCGAACCGATGAAGATGCTTTCAAG
GTCCTAAGAGAAAGAGATCAAGGTTTTGGCATTCTTGTCTCCAAAACTCCAAAAGACACA
CACGCATCTTATTCTTTGCAAGAACCATCTGAGGTTATGGTGTTTCTACGACGTTTGGTA
GAGTGGAAAAAGTTGTCATTAAGAAGACAATTTCGAATTCGAAGACAAATTGAGGAGATG
AAAGCATCTCTAAGGAACTAA