Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053134
CDS Infomation

pacid=37471844 polypeptide=PGSC0003DMP400035828 locus=PGSC0003DMG400020614 ID=PGSC0003DMT400053134.v4.03 annot-version=v4.03
Sequence

ATGGGAGACGCTTCTGATGAAAGGAAAACGGGTTGTGGCCTGTTGAACGCGGTTTTTGGA
AGGAAAAATATGTGGACAAAAAGATCAACATCAACAGGTTCGCTTCCAATGCCAAATTCC
AATAATGTTAACAATTTAACTCGATCTTCTAGTACTCAAAATTCTAAAAAGCATCGTAAT
GGATCCAACGAGGCTTTTTTAGACAATCGTGACAACGAGAAACAAGCTGATAGGATCATA
CCAAGACCTAATCAAAATCAATCCAAGGTAGCTGCGAATAAGGGTAATTTGCAAGGTGCT
GCACCTGTTTATAATCAGCAGAAAAATAATGGTCAAGGGGTACAACAAGGGTATAATAAT
CAAGGAAGAAAAGTAGCTCCGCCATCAATGGGGCTATCAGGGGAGCTTGAAAACATGATA
CAAGATCATCAAAGATCAAAGGGAGCTAATACATTAGTCCGTGCATCGTCTAGCAACGTG
ATGTTGTTTGGTAATTTGGGTAACATAAGGCAGCAAGGTGGGGGCAATGGTACTGGTGCT
ACAACAACTTCAACAGCTAATCATGTTCTTGATTATTTACCAAGAACGGCTAAAGAAGAA
CCACCACAACAACCATCTCAGAATGGGAAATATCCTACGAGTGTTATGGGTAATGTGGTA
AAGAAAAAGGGTGATCAAGAGCAGGGGAAAACAGGGGGCTCTGTTTCCCTTTGTCGCGCT
TTATCCACAAGAATGGACCCTGAGCAATTGAAGATTCTTGGAAATGAGGATTACAAGAAT
GGAAGATTTGCTGAGGCTTTAGCTTTGTATGATGCTGCAATTTCAATTGATCCTAATAAG
GCTTCTTATAGAAGCAACAAATCCGCTGCTTTGACTGCTTTAGGAAGGCTTCTTCAAGCT
GTTTTTGAGTGCAGAGAAGCTATATCAATTGATCCTCATTATCAAAGAGCTCATAATCGT
TTGGCCACCCTATGTGTCAGATTAGGAGACACAGAGAAAGCTATGTACCATTACAAACAA
GCCGCATCAGAAGCTGATCCTGATGTTGTGACAAAGTCTAAAACTATCCAAATTCATCTC
AACAAGTGTACTGAGGCGAAGAGGCAAAGAGATTGGAACACTCTTCTTAAAGAATCTGCC
CTCGCCATATCGGCTGGTGCAGATTCTGCATCACAGATATTTGCTTTGAAAGCGGAGGCG
TTGGTGAAGCTCCATAGATACCATGAAGCAGATCAAACTCTGAAGAATGGTCCGAATTTT
GATATCGATGAATGTATAAAGTTCTTTGGCCCTATTGGCAATGCAGGCTTGTTAGTCATT
CAAGCTCAAGTTGACATGGCTGCTGGCAGGATTGACGATGCCCTAGCAGCAGCTCAACGA
GCATCCCAACTAGATGGGAACAACAAGGAAGTGAACATGATAGTTAGGAGAACAAAGGCA
GTAGCAAGTGCTAGAACAAAGGGAAATGAGTTGTTTAAAGGTGGAAAATATGGAGATGCT
AGTGTTGCTTATGGTGTAGGACTAGAGCATGATCCACACAACTCAGTTTTATTGTGCAAC
AGAGCAGCTTGCAGGTCAAAACTTGGCCAATTTGAGAAATCACTTGAGGATTGCAATACT
GCCCTTAATGTTAGACCATCTTTCACCAAAGCTAGGTTGAGGAAGGCTGATTGTTACTTT
AAGATGGGAAAATGGGAAGCATGCATACAAGAATGTGAAGTGTTGATAAAGGAGACACCA
GAAAATGAGGATGTGGGACAAATGATTAAGGATGCTCAACAACAACTCAAAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400035828
PEP Infomation

pacid=37471844 transcript=PGSC0003DMT400053134 locus=PGSC0003DMG400020614 ID=PGSC0003DMT400053134.v4.03 annot-version=v4.03
Sequence

MGDASDERKTGCGLLNAVFGRKNMWTKRSTSTGSLPMPNSNNVNNLTRSSSTQNSKKHRN
GSNEAFLDNRDNEKQADRIIPRPNQNQSKVAANKGNLQGAAPVYNQQKNNGQGVQQGYNN
QGRKVAPPSMGLSGELENMIQDHQRSKGANTLVRASSSNVMLFGNLGNIRQQGGGNGTGA
TTTSTANHVLDYLPRTAKEEPPQQPSQNGKYPTSVMGNVVKKKGDQEQGKTGGSVSLCRA
LSTRMDPEQLKILGNEDYKNGRFAEALALYDAAISIDPNKASYRSNKSAALTALGRLLQA
VFECREAISIDPHYQRAHNRLATLCVRLGDTEKAMYHYKQAASEADPDVVTKSKTIQIHL
NKCTEAKRQRDWNTLLKESALAISAGADSASQIFALKAEALVKLHRYHEADQTLKNGPNF
DIDECIKFFGPIGNAGLLVIQAQVDMAAGRIDDALAAAQRASQLDGNNKEVNMIVRRTKA
VASARTKGNELFKGGKYGDASVAYGVGLEHDPHNSVLLCNRAACRSKLGQFEKSLEDCNT
ALNVRPSFTKARLRKADCYFKMGKWEACIQECEVLIKETPENEDVGQMIKDAQQQLKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400053134
Transcript Infomation

pacid=37471844 locus=PGSC0003DMG400020614 ID=PGSC0003DMT400053134.v4.03 annot-version=v4.03
Sequence

ATGGGAGACGCTTCTGATGAAAGGAAAACGGGTTGTGGCCTGTTGAACGCGGTTTTTGGA
AGGAAAAATATGTGGACAAAAAGATCAACATCAACAGGTTCGCTTCCAATGCCAAATTCC
AATAATGTTAACAATTTAACTCGATCTTCTAGTACTCAAAATTCTAAAAAGCATCGTAAT
GGATCCAACGAGGCTTTTTTAGACAATCGTGACAACGAGAAACAAGCTGATAGGATCATA
CCAAGACCTAATCAAAATCAATCCAAGGTAGCTGCGAATAAGGGTAATTTGCAAGGTGCT
GCACCTGTTTATAATCAGCAGAAAAATAATGGTCAAGGGGTACAACAAGGGTATAATAAT
CAAGGAAGAAAAGTAGCTCCGCCATCAATGGGGCTATCAGGGGAGCTTGAAAACATGATA
CAAGATCATCAAAGATCAAAGGGAGCTAATACATTAGTCCGTGCATCGTCTAGCAACGTG
ATGTTGTTTGGTAATTTGGGTAACATAAGGCAGCAAGGTGGGGGCAATGGTACTGGTGCT
ACAACAACTTCAACAGCTAATCATGTTCTTGATTATTTACCAAGAACGGCTAAAGAAGAA
CCACCACAACAACCATCTCAGAATGGGAAATATCCTACGAGTGTTATGGGTAATGTGGTA
AAGAAAAAGGGTGATCAAGAGCAGGGGAAAACAGGGGGCTCTGTTTCCCTTTGTCGCGCT
TTATCCACAAGAATGGACCCTGAGCAATTGAAGATTCTTGGAAATGAGGATTACAAGAAT
GGAAGATTTGCTGAGGCTTTAGCTTTGTATGATGCTGCAATTTCAATTGATCCTAATAAG
GCTTCTTATAGAAGCAACAAATCCGCTGCTTTGACTGCTTTAGGAAGGCTTCTTCAAGCT
GTTTTTGAGTGCAGAGAAGCTATATCAATTGATCCTCATTATCAAAGAGCTCATAATCGT
TTGGCCACCCTATGTGTCAGATTAGGAGACACAGAGAAAGCTATGTACCATTACAAACAA
GCCGCATCAGAAGCTGATCCTGATGTTGTGACAAAGTCTAAAACTATCCAAATTCATCTC
AACAAGTGTACTGAGGCGAAGAGGCAAAGAGATTGGAACACTCTTCTTAAAGAATCTGCC
CTCGCCATATCGGCTGGTGCAGATTCTGCATCACAGATATTTGCTTTGAAAGCGGAGGCG
TTGGTGAAGCTCCATAGATACCATGAAGCAGATCAAACTCTGAAGAATGGTCCGAATTTT
GATATCGATGAATGTATAAAGTTCTTTGGCCCTATTGGCAATGCAGGCTTGTTAGTCATT
CAAGCTCAAGTTGACATGGCTGCTGGCAGGATTGACGATGCCCTAGCAGCAGCTCAACGA
GCATCCCAACTAGATGGGAACAACAAGGAAGTGAACATGATAGTTAGGAGAACAAAGGCA
GTAGCAAGTGCTAGAACAAAGGGAAATGAGTTGTTTAAAGGTGGAAAATATGGAGATGCT
AGTGTTGCTTATGGTGTAGGACTAGAGCATGATCCACACAACTCAGTTTTATTGTGCAAC
AGAGCAGCTTGCAGGTCAAAACTTGGCCAATTTGAGAAATCACTTGAGGATTGCAATACT
GCCCTTAATGTTAGACCATCTTTCACCAAAGCTAGGTTGAGGAAGGCTGATTGTTACTTT
AAGATGGGAAAATGGGAAGCATGCATACAAGAATGTGAAGTGTTGATAAAGGAGACACCA
GAAAATGAGGATGTGGGACAAATGATTAAGGATGCTCAACAACAACTCAAAAAATGA