Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400053065
CDS Infomation

pacid=37457721 polypeptide=PGSC0003DMP400035778 locus=PGSC0003DMG400020586 ID=PGSC0003DMT400053065.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAATTCTTCTCACAGCAGTCATCAATAAATCTGTAGAAATAGCTGGAAATCTA
CTCGTGCAAGAAGGAACGCGTTTATATTGGTTGAAAGAGGACATCGATTGGCTCCAGAGA
GAAATGAGACACATTCAATCATATGTGGACGATGCAAAGGCCAAGGAAGTTGGAGGCGAT
TCAAGGGTCAAAAATTTATTAAAAGATATTCAACAACTCGCAAGTGATGTGGAGGATCTC
TTTGATGAGTTCCTTCCAAAAATTCAACAATCCAATAAGTTCATTTGTTGCTTTAAGACA
GTTTCTTTTGCCGAAGGGTTGCGGAGAAGATTATTCCTTCATGCTGATGAAATAGAGGTC
ATCAGTTTGGATGATGACTTCAATAAGCTACAAGCCAAATTACTTGATCATGATTTGCCT
TATGGAGTTGTTTCAATAGTTGGCATGCCCGGTTTAGGAAAAACAACTCTTGCCAAGAAA
CTTTATAGGCATGTCCGTCATCAATTTGAATGTTCAGGATTGGTCTATGTTTCACAGCAG
GCAAGGGCAGGAGAAATCTTACAGGACATTGCCAAACAAGTTGGACTGACGGAACAGGAA
AGGAAAGAGAACTTGGAAGGCAACCTAAGCTCACTCTTGCAAAGAAAAAGGTGTGTTATC
CTCTTAGATGACATTTGGGATGTTGAAATTTGGAATTATCTGAATTTTTTCCTTCCTGAC
TCAAAAATTGGCAGTAGGATAATAATCACATCTCGAAATAGTAATGTAGGCAGATACATA
GGAGGAGATTCCTCACTTCACGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400035778
PEP Infomation

pacid=37457721 transcript=PGSC0003DMT400053065 locus=PGSC0003DMG400020586 ID=PGSC0003DMT400053065.v4.03 annot-version=v4.03
Sequence

MAEILLTAVINKSVEIAGNLLVQEGTRLYWLKEDIDWLQREMRHIQSYVDDAKAKEVGGD
SRVKNLLKDIQQLASDVEDLFDEFLPKIQQSNKFICCFKTVSFAEGLRRRLFLHADEIEV
ISLDDDFNKLQAKLLDHDLPYGVVSIVGMPGLGKTTLAKKLYRHVRHQFECSGLVYVSQQ
ARAGEILQDIAKQVGLTEQERKENLEGNLSSLLQRKRCVILLDDIWDVEIWNYLNFFLPD
SKIGSRIIITSRNSNVGRYIGGDSSLHV*

Transcript Sequence

Transcript ID

PGSC0003DMT400053065
Transcript Infomation

pacid=37457721 locus=PGSC0003DMG400020586 ID=PGSC0003DMT400053065.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAATTCTTCTCACAGCAGTCATCAATAAATCTGTAGAAATAGCTGGAAATCTA
CTCGTGCAAGAAGGAACGCGTTTATATTGGTTGAAAGAGGACATCGATTGGCTCCAGAGA
GAAATGAGACACATTCAATCATATGTGGACGATGCAAAGGCCAAGGAAGTTGGAGGCGAT
TCAAGGGTCAAAAATTTATTAAAAGATATTCAACAACTCGCAAGTGATGTGGAGGATCTC
TTTGATGAGTTCCTTCCAAAAATTCAACAATCCAATAAGTTCATTTGTTGCTTTAAGACA
GTTTCTTTTGCCGAAGGGTTGCGGAGAAGATTATTCCTTCATGCTGATGAAATAGAGGTC
ATCAGTTTGGATGATGACTTCAATAAGCTACAAGCCAAATTACTTGATCATGATTTGCCT
TATGGAGTTGTTTCAATAGTTGGCATGCCCGGTTTAGGAAAAACAACTCTTGCCAAGAAA
CTTTATAGGCATGTCCGTCATCAATTTGAATGTTCAGGATTGGTCTATGTTTCACAGCAG
GCAAGGGCAGGAGAAATCTTACAGGACATTGCCAAACAAGTTGGACTGACGGAACAGGAA
AGGAAAGAGAACTTGGAAGGCAACCTAAGCTCACTCTTGCAAAGAAAAAGGTGTGTTATC
CTCTTAGATGACATTTGGGATGTTGAAATTTGGAATTATCTGAATTTTTTCCTTCCTGAC
TCAAAAATTGGCAGTAGGATAATAATCACATCTCGAAATAGTAATGTAGGCAGATACATA
GGAGGAGATTCCTCACTTCACGTGTAG