Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052998
CDS Infomation

pacid=37454230 polypeptide=PGSC0003DMP400035735 locus=PGSC0003DMG400020564 ID=PGSC0003DMT400052998.v4.03 annot-version=v4.03
Sequence

ATGGCCTTATTCTCTTCTTCGGAAACCACAATATTCAACAAATACGAGCTAGGAAAACTC
TTGGGATGTGGCGCATTTGCCAAAGTGTACCACGCTAGGGACATCAAAGATGGCCGTAGC
GTGGCGATTAAAATTATTAACAAAACAAGAGTTAGTAACGCGATTTTAATGGCGAATATC
AAACGTGAGATCTCAATTATGAGACTTCTACGACACCCACACATCGTCAAACTTGACGAA
GTGTTGGCTACCAAGACGAAGATCTACTTCGTCATGGAATTTGTTAAAGGAGGCGAATTG
TTCGCAAAAATTGCTAAAACTGGAAAATTTTCCGAAGATCAAAGTCGGAAAATTTTCCAG
CAACTCATATCTGCTGTTCGTTATTGTCATTCTCGAGGTGTGTACCATCGTGATTTGAAG
CCAGAAAATTTACTTATTGATGAAAATGGTGATTTGAAAGTTTCTGATTTTGGGCTAAGT
GCGTTAACGGAACAAGTACAACAAGATGGGTTGTTACACACGCTTTGTGGGACCCCATCT
TACGTGGCACCAGATGTTTTAACAAAAAAAGGATATGATGGAGCTAAGGCGGACATTTGG
ACATGTGGAATCATCTTGTTTGTGTTAAATGCTGGATATTTGCCATTTCATGATTCAAAT
CTTATGGGGATGTACCATAAGATTATCAATGGAGAATACAAGTGTCCAAAATGGATGTCA
TCTGAGTTAAAACGATTTTTACGTAGACTTCTTGATACAAATCCAATGACAAGAATAACC
ATTGAAGAAATCATGAATGATCCTTGGTTTAAGAAAGGCTTGAAACGTGTTAAATTCTGT
GAGGAAGACGGTAAGCCTCATAGACGAATTCAGAATTCAGATTCCACAGGTCAAGATGAG
CCTAGCGCGGAAATAGAAGAGGTCAAGGAGGGAGATGACAAGAACAAGAATTCTTATTTG
AATGCTTTTGATATAATTTCATTCTCTATGGGATTAGACCTCTCAGGATTGTTAAATGAC
GGTTTTAACCCTTTAGAGGATTTCGAACGATTAGTTGTTGAAGGGTCATTGGAGATAGTA
ATGGAGATAGTAGAAGAAATGGCAAAGAAGGAGAATATGAGGTTAAAGAAGAAAAAAGAA
TGGGGAATAGAGTTGAAGAAAGGTAAATTGATTATGAACATGGAAATTTACAGAGTGATA
GATGGGTTTGTTGTTGTTGAGGTTCGTCGAAAAGTTGGTGATATTGATATGTACAAACAA
ATATTGAAGAATAACATGAAGCCAGTAATTCTCGGCCAACAGCCGATGGAAGTACTGATT
TCAACAGAGGTGGATCCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400035735
PEP Infomation

pacid=37454230 transcript=PGSC0003DMT400052998 locus=PGSC0003DMG400020564 ID=PGSC0003DMT400052998.v4.03 annot-version=v4.03
Sequence

MALFSSSETTIFNKYELGKLLGCGAFAKVYHARDIKDGRSVAIKIINKTRVSNAILMANI
KREISIMRLLRHPHIVKLDEVLATKTKIYFVMEFVKGGELFAKIAKTGKFSEDQSRKIFQ
QLISAVRYCHSRGVYHRDLKPENLLIDENGDLKVSDFGLSALTEQVQQDGLLHTLCGTPS
YVAPDVLTKKGYDGAKADIWTCGIILFVLNAGYLPFHDSNLMGMYHKIINGEYKCPKWMS
SELKRFLRRLLDTNPMTRITIEEIMNDPWFKKGLKRVKFCEEDGKPHRRIQNSDSTGQDE
PSAEIEEVKEGDDKNKNSYLNAFDIISFSMGLDLSGLLNDGFNPLEDFERLVVEGSLEIV
MEIVEEMAKKENMRLKKKKEWGIELKKGKLIMNMEIYRVIDGFVVVEVRRKVGDIDMYKQ
ILKNNMKPVILGQQPMEVLISTEVDP*

Transcript Sequence

Transcript ID

PGSC0003DMT400052998
Transcript Infomation

pacid=37454230 locus=PGSC0003DMG400020564 ID=PGSC0003DMT400052998.v4.03 annot-version=v4.03
Sequence

ATGGCCTTATTCTCTTCTTCGGAAACCACAATATTCAACAAATACGAGCTAGGAAAACTC
TTGGGATGTGGCGCATTTGCCAAAGTGTACCACGCTAGGGACATCAAAGATGGCCGTAGC
GTGGCGATTAAAATTATTAACAAAACAAGAGTTAGTAACGCGATTTTAATGGCGAATATC
AAACGTGAGATCTCAATTATGAGACTTCTACGACACCCACACATCGTCAAACTTGACGAA
GTGTTGGCTACCAAGACGAAGATCTACTTCGTCATGGAATTTGTTAAAGGAGGCGAATTG
TTCGCAAAAATTGCTAAAACTGGAAAATTTTCCGAAGATCAAAGTCGGAAAATTTTCCAG
CAACTCATATCTGCTGTTCGTTATTGTCATTCTCGAGGTGTGTACCATCGTGATTTGAAG
CCAGAAAATTTACTTATTGATGAAAATGGTGATTTGAAAGTTTCTGATTTTGGGCTAAGT
GCGTTAACGGAACAAGTACAACAAGATGGGTTGTTACACACGCTTTGTGGGACCCCATCT
TACGTGGCACCAGATGTTTTAACAAAAAAAGGATATGATGGAGCTAAGGCGGACATTTGG
ACATGTGGAATCATCTTGTTTGTGTTAAATGCTGGATATTTGCCATTTCATGATTCAAAT
CTTATGGGGATGTACCATAAGATTATCAATGGAGAATACAAGTGTCCAAAATGGATGTCA
TCTGAGTTAAAACGATTTTTACGTAGACTTCTTGATACAAATCCAATGACAAGAATAACC
ATTGAAGAAATCATGAATGATCCTTGGTTTAAGAAAGGCTTGAAACGTGTTAAATTCTGT
GAGGAAGACGGTAAGCCTCATAGACGAATTCAGAATTCAGATTCCACAGGTCAAGATGAG
CCTAGCGCGGAAATAGAAGAGGTCAAGGAGGGAGATGACAAGAACAAGAATTCTTATTTG
AATGCTTTTGATATAATTTCATTCTCTATGGGATTAGACCTCTCAGGATTGTTAAATGAC
GGTTTTAACCCTTTAGAGGATTTCGAACGATTAGTTGTTGAAGGGTCATTGGAGATAGTA
ATGGAGATAGTAGAAGAAATGGCAAAGAAGGAGAATATGAGGTTAAAGAAGAAAAAAGAA
TGGGGAATAGAGTTGAAGAAAGGTAAATTGATTATGAACATGGAAATTTACAGAGTGATA
GATGGGTTTGTTGTTGTTGAGGTTCGTCGAAAAGTTGGTGATATTGATATGTACAAACAA
ATATTGAAGAATAACATGAAGCCAGTAATTCTCGGCCAACAGCCGATGGAAGTACTGATT
TCAACAGAGGTGGATCCATAA