Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052983
CDS Infomation

pacid=37454138 polypeptide=PGSC0003DMP400035725 locus=PGSC0003DMG400020558 ID=PGSC0003DMT400052983.v4.03 annot-version=v4.03
Sequence

ATGCTTCCTAAAAAGAGACCGGCAGAAGGCGTGGTAGTTGAAGGTAACAGTAGCAGTTGT
GATCCAGAAAGTGCTCTTAAAAAGCCTAGAATTAGTTGCGTGATTTCTTCTGGTACCAAA
GAGAATACCAGTGGTTGCAGTAGTAACAAGGTCGTAAGTAATAATACAAACGGTAACGCT
AGCAGCAGTAGTGTTGGTGAACGGTCAGTGACTGAAATGGCTTTTGATGATGGAAATCCA
CATGATATTGATGAGGATCTCCACAGCAGACAGCTCGCCGTGTATGGCCGTGAAACTATG
CGGCGGCTCTTTGCTTCTAACGTTCTTGTCTCGGGAATCCAAGGGCTTGGTGCTGAAATA
GCAAAGAATCTTATACTTGCTGGTGTAAAGTCTGTGACTCTGCATGATGAAGGACAAGTG
CAGTTGTGGGATTTGTCGAGCAATTTTATTTTCTCAGAGAGTGATGTTGGTAAGAACAGA
GCACTTGCTTCTGTTCAAAAGCTACAAGAGCTCAACAATGCTGTGGTTGTCTCAAGTTTG
ACGACAAAATTGACCAAAGAAAAGCTTTCTGATTTCCAGGCTGTGGTATTTACTAACACC
AGTTTAGAGGATGCACTGGAATTCAATGACTACTGCCACAACCATCAACCCCCTATTGCA
TTTATCAGAACTGAAGTGAGGGGTCTATTTGGTTATGTCTTCTGTGATTTTGGCCCTGAG
TTCACAGTTTTTGATGTAGATGGTGAAGAACCTCATACGGGTATTATTGCATCAATTAGT
AATGATAACCCTGCCCTAATTTCGTGTGTGGATGATGAAAGGCTTGAGTTTCAGGATGGG
GACCTAGTTGTCTTTTCAGAAGTACAGGGCATGACAGAACTTAATGATGGCAAGCCAAGA
AAAATTAGCAGTGCAAGACCTTATTCCTTTACCCTCGATGAAGACACAACGAACTTTGGT
CCCTATGGGAGAGGTGGTATTGTTACTCAGGTGAAGCCACCCAAAATTTTGAACTTCAAG
ACACTGAGGGAAGCTATCATGGATCCTGGCGATTTTCTTCTTAGTGATTTTTCAAAGTTT
GACCGCCCACCTCTGCTACATTTGGCATTCCAAGCATTAGACAAGTTCAGATCAGATTTG
GCACGATTTCCTCTTGCTGGTTCAGAAGATGATGCTCAGAGGCTGATATCTATTGCCACC
AATTTAAATGAAAGTAATGGGAATGTCAAACTGGACGATATAAACCCAAAACTTCTACAG
CAGTTCTCTCATGGTGCACGTGCCGAACTTAATCCCATGGCTGCTATGTTTGGTGGTATT
GTTGGGCAGGAGGTTGTGAAGGCTTGCTCTGGGAAGTTTCATCCACTTTATCAGTTCTTT
TACTTTGACTCCCTGGAATCACTTCCAACTGAACCACTGGATCCTAGTGATTTAAAGCCA
TTAAATACTCGGTATGATGCCCAAATCTCAGTTTTTGGGCAGAAATTCCAGAAGAAACTA
GAAGATGCCAAGGTGTTTTTGGTGGGATCTGGTGCCCTGGGTTGTGAGTTCCTGAAGAAC
TTGGCTTTAATGGGAGTTGCATGCACCGAGCAAGGGAAATTAACAGTGACTGATGATGAT
GTTATTGAGAAGAGTAATCTTAGTAGACAATTTCTCTTCCGTGATTGGAACATTGGCCAG
GCAAAATCTACTGTTGCTGCTGCTGCTGCAACATCAATAAATCCCCAGCTCCGAGTTGAA
GCTTTGCAGAACCGTGTGGGTCCTGAAACTGAAAATGTGTTTGATGACACTTTCTGGGAG
AATCTTAGTGTGGTTATTAACGCACTTGACAATGTCAATGCAAGACTTTATGTCGATCAG
AGATGCTTGTACTTTCAGAAGCCACTGCTTGAATCAGGGACCCTTGGTGCCAAATGTAAC
ACTCAGATGGTGATTCCCCATCTGACTGAGAATTATGGTGCATCAAGAGATCCTCCAGAG
AAACAAGCACCAATGTGCACTTTGCACTCCTTCCCACATAATATAGATCATTGTTTGACA
TGGGCACGATCCGAATTTGAGGGTTTACTTGAGAAAACACCAGCCGAAGTCAACGCTTAT
CTTTCTAATCCAAGTGAATATACATCTGCACAAACAAATGCTGGGGATGCTCAAGCCAGA
GACAATTTGGAGCGTATTCTCGAGTGTCTAGATCGAGAAAGCTGTGAAACTTTTGAAGAT
TGCATTGCATGGGCACGTCTCAAGTTTGAAGAATATTTTGCAAACCGAGTAAAACAATTG
ATTTTCACTTTCCCCGAGGATGCTGTGACCAGCTCTGGAGCCCCTTTTTGGTCAGCCCCG
AAGCGCTTCCCTCGCCCCTTGCAGTTCTCTTCTACCGACCCAAGTCATCTCCATTTTATC
ATGGCTGCATCCATATTACGCGCTGAAACATTTGGTATACCTATTCCTGATTGGGTTAAG
CACCCAAAGAAATTGAGTGAAGCGGTGCACAAGGTTATGGTCCCATGTTTTCAACCTAGA
AAAGATGCAAAAATTGTGACTGATGAGAAGGCAACCAGTCTCTCTTCATCAGCTTCTATA
GATGATGCTGCTGTCATTGATGAACTTATATCAAAGCTGGAGTGCAGTAGGAAGAATTTA
CCACCAGGCTTCAGGATGAAACCTATTCAATTTGAGAAGGACGATGACACTAATTACCAC
ATGGATCTTATAGCAGCACTTGCCAACATGAGAGCAAGGAACTACTGTATCCCTGAAGTT
GACAAACTGAAAGCTAAGTTTATCGCGGGAAGGATCATTCCAGCAATCGCGACTACGACT
GCGATGGCTACGGGTTTGGTTTGCCTTGAGCTGTATAAGGTTCTAGATGGCGGTCACAAA
CTGGAGGACTACCGGAACACGTTTGCCAACCTTGCTCTACCGCTTTTTTCCATAGCTGAG
CCAGTACCACCGAAGGTCATCAAACATAATGACCTGAGCTGGACTGTTTGGGATAGGTGG
GTCATTAAGGACAATCCTACACTGAGAGAACTAATCCAATGGCTTGCAGACAAAGGACTG
AATGCATACAGCATTTCATGTGGAAGCTGCCTGCTCTTTAACAGCATGTTCCCCCGGCAC
AAGGAACGAATGGACCAGAAAGTAGTAGATTTGGCAAGGGACGTGGCAAAGATGGAGATA
CCACCATACCGGCGTCACTTGGATGTTGTTGTTGCCTGTGATGACGACAATGACGAAGAC
GTTGATATTCCTCTGGTGTCTGTATACTTCCGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035725
PEP Infomation

pacid=37454138 transcript=PGSC0003DMT400052983 locus=PGSC0003DMG400020558 ID=PGSC0003DMT400052983.v4.03 annot-version=v4.03
Sequence

MLPKKRPAEGVVVEGNSSSCDPESALKKPRISCVISSGTKENTSGCSSNKVVSNNTNGNA
SSSSVGERSVTEMAFDDGNPHDIDEDLHSRQLAVYGRETMRRLFASNVLVSGIQGLGAEI
AKNLILAGVKSVTLHDEGQVQLWDLSSNFIFSESDVGKNRALASVQKLQELNNAVVVSSL
TTKLTKEKLSDFQAVVFTNTSLEDALEFNDYCHNHQPPIAFIRTEVRGLFGYVFCDFGPE
FTVFDVDGEEPHTGIIASISNDNPALISCVDDERLEFQDGDLVVFSEVQGMTELNDGKPR
KISSARPYSFTLDEDTTNFGPYGRGGIVTQVKPPKILNFKTLREAIMDPGDFLLSDFSKF
DRPPLLHLAFQALDKFRSDLARFPLAGSEDDAQRLISIATNLNESNGNVKLDDINPKLLQ
QFSHGARAELNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSLESLPTEPLDPSDLKP
LNTRYDAQISVFGQKFQKKLEDAKVFLVGSGALGCEFLKNLALMGVACTEQGKLTVTDDD
VIEKSNLSRQFLFRDWNIGQAKSTVAAAAATSINPQLRVEALQNRVGPETENVFDDTFWE
NLSVVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPE
KQAPMCTLHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPSEYTSAQTNAGDAQAR
DNLERILECLDRESCETFEDCIAWARLKFEEYFANRVKQLIFTFPEDAVTSSGAPFWSAP
KRFPRPLQFSSTDPSHLHFIMAASILRAETFGIPIPDWVKHPKKLSEAVHKVMVPCFQPR
KDAKIVTDEKATSLSSSASIDDAAVIDELISKLECSRKNLPPGFRMKPIQFEKDDDTNYH
MDLIAALANMRARNYCIPEVDKLKAKFIAGRIIPAIATTTAMATGLVCLELYKVLDGGHK
LEDYRNTFANLALPLFSIAEPVPPKVIKHNDLSWTVWDRWVIKDNPTLRELIQWLADKGL
NAYSISCGSCLLFNSMFPRHKERMDQKVVDLARDVAKMEIPPYRRHLDVVVACDDDNDED
VDIPLVSVYFR*

Transcript Sequence

Transcript ID

PGSC0003DMT400052983
Transcript Infomation

pacid=37454138 locus=PGSC0003DMG400020558 ID=PGSC0003DMT400052983.v4.03 annot-version=v4.03
Sequence

ATGCTTCCTAAAAAGAGACCGGCAGAAGGCGTGGTAGTTGAAGGTAACAGTAGCAGTTGT
GATCCAGAAAGTGCTCTTAAAAAGCCTAGAATTAGTTGCGTGATTTCTTCTGGTACCAAA
GAGAATACCAGTGGTTGCAGTAGTAACAAGGTCGTAAGTAATAATACAAACGGTAACGCT
AGCAGCAGTAGTGTTGGTGAACGGTCAGTGACTGAAATGGCTTTTGATGATGGAAATCCA
CATGATATTGATGAGGATCTCCACAGCAGACAGCTCGCCGTGTATGGCCGTGAAACTATG
CGGCGGCTCTTTGCTTCTAACGTTCTTGTCTCGGGAATCCAAGGGCTTGGTGCTGAAATA
GCAAAGAATCTTATACTTGCTGGTGTAAAGTCTGTGACTCTGCATGATGAAGGACAAGTG
CAGTTGTGGGATTTGTCGAGCAATTTTATTTTCTCAGAGAGTGATGTTGGTAAGAACAGA
GCACTTGCTTCTGTTCAAAAGCTACAAGAGCTCAACAATGCTGTGGTTGTCTCAAGTTTG
ACGACAAAATTGACCAAAGAAAAGCTTTCTGATTTCCAGGCTGTGGTATTTACTAACACC
AGTTTAGAGGATGCACTGGAATTCAATGACTACTGCCACAACCATCAACCCCCTATTGCA
TTTATCAGAACTGAAGTGAGGGGTCTATTTGGTTATGTCTTCTGTGATTTTGGCCCTGAG
TTCACAGTTTTTGATGTAGATGGTGAAGAACCTCATACGGGTATTATTGCATCAATTAGT
AATGATAACCCTGCCCTAATTTCGTGTGTGGATGATGAAAGGCTTGAGTTTCAGGATGGG
GACCTAGTTGTCTTTTCAGAAGTACAGGGCATGACAGAACTTAATGATGGCAAGCCAAGA
AAAATTAGCAGTGCAAGACCTTATTCCTTTACCCTCGATGAAGACACAACGAACTTTGGT
CCCTATGGGAGAGGTGGTATTGTTACTCAGGTGAAGCCACCCAAAATTTTGAACTTCAAG
ACACTGAGGGAAGCTATCATGGATCCTGGCGATTTTCTTCTTAGTGATTTTTCAAAGTTT
GACCGCCCACCTCTGCTACATTTGGCATTCCAAGCATTAGACAAGTTCAGATCAGATTTG
GCACGATTTCCTCTTGCTGGTTCAGAAGATGATGCTCAGAGGCTGATATCTATTGCCACC
AATTTAAATGAAAGTAATGGGAATGTCAAACTGGACGATATAAACCCAAAACTTCTACAG
CAGTTCTCTCATGGTGCACGTGCCGAACTTAATCCCATGGCTGCTATGTTTGGTGGTATT
GTTGGGCAGGAGGTTGTGAAGGCTTGCTCTGGGAAGTTTCATCCACTTTATCAGTTCTTT
TACTTTGACTCCCTGGAATCACTTCCAACTGAACCACTGGATCCTAGTGATTTAAAGCCA
TTAAATACTCGGTATGATGCCCAAATCTCAGTTTTTGGGCAGAAATTCCAGAAGAAACTA
GAAGATGCCAAGGTGTTTTTGGTGGGATCTGGTGCCCTGGGTTGTGAGTTCCTGAAGAAC
TTGGCTTTAATGGGAGTTGCATGCACCGAGCAAGGGAAATTAACAGTGACTGATGATGAT
GTTATTGAGAAGAGTAATCTTAGTAGACAATTTCTCTTCCGTGATTGGAACATTGGCCAG
GCAAAATCTACTGTTGCTGCTGCTGCTGCAACATCAATAAATCCCCAGCTCCGAGTTGAA
GCTTTGCAGAACCGTGTGGGTCCTGAAACTGAAAATGTGTTTGATGACACTTTCTGGGAG
AATCTTAGTGTGGTTATTAACGCACTTGACAATGTCAATGCAAGACTTTATGTCGATCAG
AGATGCTTGTACTTTCAGAAGCCACTGCTTGAATCAGGGACCCTTGGTGCCAAATGTAAC
ACTCAGATGGTGATTCCCCATCTGACTGAGAATTATGGTGCATCAAGAGATCCTCCAGAG
AAACAAGCACCAATGTGCACTTTGCACTCCTTCCCACATAATATAGATCATTGTTTGACA
TGGGCACGATCCGAATTTGAGGGTTTACTTGAGAAAACACCAGCCGAAGTCAACGCTTAT
CTTTCTAATCCAAGTGAATATACATCTGCACAAACAAATGCTGGGGATGCTCAAGCCAGA
GACAATTTGGAGCGTATTCTCGAGTGTCTAGATCGAGAAAGCTGTGAAACTTTTGAAGAT
TGCATTGCATGGGCACGTCTCAAGTTTGAAGAATATTTTGCAAACCGAGTAAAACAATTG
ATTTTCACTTTCCCCGAGGATGCTGTGACCAGCTCTGGAGCCCCTTTTTGGTCAGCCCCG
AAGCGCTTCCCTCGCCCCTTGCAGTTCTCTTCTACCGACCCAAGTCATCTCCATTTTATC
ATGGCTGCATCCATATTACGCGCTGAAACATTTGGTATACCTATTCCTGATTGGGTTAAG
CACCCAAAGAAATTGAGTGAAGCGGTGCACAAGGTTATGGTCCCATGTTTTCAACCTAGA
AAAGATGCAAAAATTGTGACTGATGAGAAGGCAACCAGTCTCTCTTCATCAGCTTCTATA
GATGATGCTGCTGTCATTGATGAACTTATATCAAAGCTGGAGTGCAGTAGGAAGAATTTA
CCACCAGGCTTCAGGATGAAACCTATTCAATTTGAGAAGGACGATGACACTAATTACCAC
ATGGATCTTATAGCAGCACTTGCCAACATGAGAGCAAGGAACTACTGTATCCCTGAAGTT
GACAAACTGAAAGCTAAGTTTATCGCGGGAAGGATCATTCCAGCAATCGCGACTACGACT
GCGATGGCTACGGGTTTGGTTTGCCTTGAGCTGTATAAGGTTCTAGATGGCGGTCACAAA
CTGGAGGACTACCGGAACACGTTTGCCAACCTTGCTCTACCGCTTTTTTCCATAGCTGAG
CCAGTACCACCGAAGGTCATCAAACATAATGACCTGAGCTGGACTGTTTGGGATAGGTGG
GTCATTAAGGACAATCCTACACTGAGAGAACTAATCCAATGGCTTGCAGACAAAGGACTG
AATGCATACAGCATTTCATGTGGAAGCTGCCTGCTCTTTAACAGCATGTTCCCCCGGCAC
AAGGAACGAATGGACCAGAAAGTAGTAGATTTGGCAAGGGACGTGGCAAAGATGGAGATA
CCACCATACCGGCGTCACTTGGATGTTGTTGTTGCCTGTGATGACGACAATGACGAAGAC
GTTGATATTCCTCTGGTGTCTGTATACTTCCGTTGA