Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052945
CDS Infomation

pacid=37452964 polypeptide=PGSC0003DMP400035700 locus=PGSC0003DMG400020546 ID=PGSC0003DMT400052945.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAGAGGGAAAAAGTGACGCCGATAACCGGAGTACAATCACAGTGAATGTTAAA
TTCAGTGGTCGATCGATACCGGTGGAAATCTCCGACGAGTCCACTGTCAAACACCTCAAG
TCTCTCCTTCAACCACTCACAAATGTCCTCTCTCGCGGCCAAAAACTCATCTTCAAAGGG
AAAGTTTTGGTGGATGAAATAACATTGAAGTCATCGGAGGTTGGAAATGGTGCGAAGATC
ATGCTTATGGCTTCCCAGGGCTTACATCAAGGGGATGGACCAATAAGAAAGGAAGCTTCC
AACTTGCCCACAGCGAGGAGGATGCCTGAAGCTATGAGACCTAAAAGGGATGTTCCTCAA
GTTCCTGTTGTGAAGAGCCAACTTGAACGGTGGAAGGCCACTGGGGTTGTTGCATTATCA
GAATGCAATCTGAAGGTCTTGCCTGATGAAGTGTTGACCTGCGGACCTTCCGCTAGAGTC
CTGGATCTCAGCCACAACGCCATACAGCATCTTCCAGCCGCAATTAATAGCTTGAGTTCT
CTTCAGAAATTGATCCTCAATGGGAATGAAATTATGGATAATTCCTTAAGCTGGGAAGAG
CTAGCTTCTCTAAAGAGTCTTATGGTTATCTCACTGAACCAAAACCACATAGCAACGCTG
CCTCCTGAGGTCGGCACTTTGACCGGTCTGAGACAACTTCATATTGCACATAACGAGTTA
ACAGGTCTCCCATCTGAGATAGGTCTGCTGACCAGCCTTGAGGTTCTGAAAGTTAACAAC
AACAGGATACGCTCTATTCCGGAAAGTATAGGGGGTTGTGTTTCTCTTATTGAGGTTGAT
CTTTCATCTAATCTTTTGGTAGAGCTGCCAGAAACAATTAGCAAACTAAAGGACTTAAAG
GCACTTTATCTTGGGAACAATGGGCTCAAATCCCTTCCTAGCAGCATTTTTAAACAGTGC
TGTCAACTCTCTACACTAGATCTCCATGGAACTGAAATAACTATAGATGTTATCTGCCAG
ATTGAAGGATGGGAGAATTTTGATGAGAGAAGACGCTCGAAGCATCAGAAACAACTGGAC
TTCAGAGTGAGCAGCTCTGGCAAATTTGACGAAGGAGCTGATCAAAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035700
PEP Infomation

pacid=37452964 transcript=PGSC0003DMT400052945 locus=PGSC0003DMG400020546 ID=PGSC0003DMT400052945.v4.03 annot-version=v4.03
Sequence

MEKEGKSDADNRSTITVNVKFSGRSIPVEISDESTVKHLKSLLQPLTNVLSRGQKLIFKG
KVLVDEITLKSSEVGNGAKIMLMASQGLHQGDGPIRKEASNLPTARRMPEAMRPKRDVPQ
VPVVKSQLERWKATGVVALSECNLKVLPDEVLTCGPSARVLDLSHNAIQHLPAAINSLSS
LQKLILNGNEIMDNSLSWEELASLKSLMVISLNQNHIATLPPEVGTLTGLRQLHIAHNEL
TGLPSEIGLLTSLEVLKVNNNRIRSIPESIGGCVSLIEVDLSSNLLVELPETISKLKDLK
ALYLGNNGLKSLPSSIFKQCCQLSTLDLHGTEITIDVICQIEGWENFDERRRSKHQKQLD
FRVSSSGKFDEGADQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400052945
Transcript Infomation

pacid=37452964 locus=PGSC0003DMG400020546 ID=PGSC0003DMT400052945.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAGAGGGAAAAAGTGACGCCGATAACCGGAGTACAATCACAGTGAATGTTAAA
TTCAGTGGTCGATCGATACCGGTGGAAATCTCCGACGAGTCCACTGTCAAACACCTCAAG
TCTCTCCTTCAACCACTCACAAATGTCCTCTCTCGCGGCCAAAAACTCATCTTCAAAGGG
AAAGTTTTGGTGGATGAAATAACATTGAAGTCATCGGAGGTTGGAAATGGTGCGAAGATC
ATGCTTATGGCTTCCCAGGGCTTACATCAAGGGGATGGACCAATAAGAAAGGAAGCTTCC
AACTTGCCCACAGCGAGGAGGATGCCTGAAGCTATGAGACCTAAAAGGGATGTTCCTCAA
GTTCCTGTTGTGAAGAGCCAACTTGAACGGTGGAAGGCCACTGGGGTTGTTGCATTATCA
GAATGCAATCTGAAGGTCTTGCCTGATGAAGTGTTGACCTGCGGACCTTCCGCTAGAGTC
CTGGATCTCAGCCACAACGCCATACAGCATCTTCCAGCCGCAATTAATAGCTTGAGTTCT
CTTCAGAAATTGATCCTCAATGGGAATGAAATTATGGATAATTCCTTAAGCTGGGAAGAG
CTAGCTTCTCTAAAGAGTCTTATGGTTATCTCACTGAACCAAAACCACATAGCAACGCTG
CCTCCTGAGGTCGGCACTTTGACCGGTCTGAGACAACTTCATATTGCACATAACGAGTTA
ACAGGTCTCCCATCTGAGATAGGTCTGCTGACCAGCCTTGAGGTTCTGAAAGTTAACAAC
AACAGGATACGCTCTATTCCGGAAAGTATAGGGGGTTGTGTTTCTCTTATTGAGGTTGAT
CTTTCATCTAATCTTTTGGTAGAGCTGCCAGAAACAATTAGCAAACTAAAGGACTTAAAG
GCACTTTATCTTGGGAACAATGGGCTCAAATCCCTTCCTAGCAGCATTTTTAAACAGTGC
TGTCAACTCTCTACACTAGATCTCCATGGAACTGAAATAACTATAGATGTTATCTGCCAG
ATTGAAGGATGGGAGAATTTTGATGAGAGAAGACGCTCGAAGCATCAGAAACAACTGGAC
TTCAGAGTGAGCAGCTCTGGCAAATTTGACGAAGGAGCTGATCAAAGCTGA