Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052940
CDS Infomation

pacid=37451938 polypeptide=PGSC0003DMP400035696 locus=PGSC0003DMG400020542 ID=PGSC0003DMT400052940.v4.03 annot-version=v4.03
Sequence

ATGTCGGATGATGAGAGAGAAGAGAAGGAGTTGGATCTGACAAGTTCTGAGGTTGTTACT
AAGTATAAGGGTGCTGCTGAAATCGTCAACAAGGCTCTGCAGTTGGTGGTGTCTGAATGC
AAGCCAAAAGCAAAGATAGTTGATCTTTGTGAAAAAGGAGATGCCTTTATCAAAGAGCAA
ACAGGGAATATGTACAAGAATGTGAAGAAGAAAATCGAGAGAGGTGTGGCATTCCCAACC
TGCATTTCAGTTAACAATACCGTCTGCCATTTTTCTCCACTGTCTAGTGATGAGACAATA
TTGGAAGAAGGTGATATGGTGAAAATTGATATGGGGTGTCATATAGATGGCTTTATTGCT
GTTGTTGCTCATACACATGTGGTCCAGGGAGGACCTGTTACTGGTAGAGCTGCTGATGTT
CTTGCGGCTGCTAATACAGCTGCTGAAGTTGCTCTGAGGCTTGTAAGACCAGGAAGGAAG
AACTCAGATGTAACAGAAGCTATTCAGAAAGTTGCTGCAGCATATGACTGCAAGATCGTT
GAGGGTGTTTTGAGCCATCAAATGAAGCAGTTTGTGATTGACGGAAACAAAGTTGTGTTA
AGTGTGTCTAATCCTGATACCAGAGTAGATGATGCAGAGTTCGAGGAGAATGAGGTCTAT
TCAATTGACATTGTTACAAGCACCGGTGATGGAAAGCCAAAGTTGTTGGATGAGAAACAA
ACAACCATCTACAAGAGAGCTGTAGATAAAAGCTACAACCTGAAGATGAAAGCATCAAGG
TTTATCTTCAGTGAAATCAGTCAGAAGTTCCCTATCATGCCATTTACAGCAAGGGATTTG
GAGGAGAAAAGAGCTCGTTTGGGACTAGTTGAATGTGTTAACCATGATCTTTTGCAGCCG
TATCCTGTTCTACATGAGAAACCTGGTGATTTGGTTGCTCACATAAAATTCACAGTGCTA
TTGATGCCTAATGGGTCAGATAGGATCACATCTCATGCTCTTCAGGAGCTGACACTTGCG
AAGACAATTGAAGATGAACCTGAAATTAAGACCTGGCTAGCTCTTCCCGTAAAGACCAAG
AAGAAAGGTGGCGGCAAGAAAAAGAAAGCAGGCAAGAAAGGTGAATCATCTCAAGCTGAG
CCTATGGAAGGCGAACCAAATGTTGCTGAATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035696
PEP Infomation

pacid=37451938 transcript=PGSC0003DMT400052940 locus=PGSC0003DMG400020542 ID=PGSC0003DMT400052940.v4.03 annot-version=v4.03
Sequence

MSDDEREEKELDLTSSEVVTKYKGAAEIVNKALQLVVSECKPKAKIVDLCEKGDAFIKEQ
TGNMYKNVKKKIERGVAFPTCISVNNTVCHFSPLSSDETILEEGDMVKIDMGCHIDGFIA
VVAHTHVVQGGPVTGRAADVLAAANTAAEVALRLVRPGRKNSDVTEAIQKVAAAYDCKIV
EGVLSHQMKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYSIDIVTSTGDGKPKLLDEKQ
TTIYKRAVDKSYNLKMKASRFIFSEISQKFPIMPFTARDLEEKRARLGLVECVNHDLLQP
YPVLHEKPGDLVAHIKFTVLLMPNGSDRITSHALQELTLAKTIEDEPEIKTWLALPVKTK
KKGGGKKKKAGKKGESSQAEPMEGEPNVAES*

Transcript Sequence

Transcript ID

PGSC0003DMT400052940
Transcript Infomation

pacid=37451938 locus=PGSC0003DMG400020542 ID=PGSC0003DMT400052940.v4.03 annot-version=v4.03
Sequence

ATGTCGGATGATGAGAGAGAAGAGAAGGAGTTGGATCTGACAAGTTCTGAGGTTGTTACT
AAGTATAAGGGTGCTGCTGAAATCGTCAACAAGGCTCTGCAGTTGGTGGTGTCTGAATGC
AAGCCAAAAGCAAAGATAGTTGATCTTTGTGAAAAAGGAGATGCCTTTATCAAAGAGCAA
ACAGGGAATATGTACAAGAATGTGAAGAAGAAAATCGAGAGAGGTGTGGCATTCCCAACC
TGCATTTCAGTTAACAATACCGTCTGCCATTTTTCTCCACTGTCTAGTGATGAGACAATA
TTGGAAGAAGGTGATATGGTGAAAATTGATATGGGGTGTCATATAGATGGCTTTATTGCT
GTTGTTGCTCATACACATGTGGTCCAGGGAGGACCTGTTACTGGTAGAGCTGCTGATGTT
CTTGCGGCTGCTAATACAGCTGCTGAAGTTGCTCTGAGGCTTGTAAGACCAGGAAGGAAG
AACTCAGATGTAACAGAAGCTATTCAGAAAGTTGCTGCAGCATATGACTGCAAGATCGTT
GAGGGTGTTTTGAGCCATCAAATGAAGCAGTTTGTGATTGACGGAAACAAAGTTGTGTTA
AGTGTGTCTAATCCTGATACCAGAGTAGATGATGCAGAGTTCGAGGAGAATGAGGTCTAT
TCAATTGACATTGTTACAAGCACCGGTGATGGAAAGCCAAAGTTGTTGGATGAGAAACAA
ACAACCATCTACAAGAGAGCTGTAGATAAAAGCTACAACCTGAAGATGAAAGCATCAAGG
TTTATCTTCAGTGAAATCAGTCAGAAGTTCCCTATCATGCCATTTACAGCAAGGGATTTG
GAGGAGAAAAGAGCTCGTTTGGGACTAGTTGAATGTGTTAACCATGATCTTTTGCAGCCG
TATCCTGTTCTACATGAGAAACCTGGTGATTTGGTTGCTCACATAAAATTCACAGTGCTA
TTGATGCCTAATGGGTCAGATAGGATCACATCTCATGCTCTTCAGGAGCTGACACTTGCG
AAGACAATTGAAGATGAACCTGAAATTAAGACCTGGCTAGCTCTTCCCGTAAAGACCAAG
AAGAAAGGTGGCGGCAAGAAAAAGAAAGCAGGCAAGAAAGGTGAATCATCTCAAGCTGAG
CCTATGGAAGGCGAACCAAATGTTGCTGAATCTTGA