Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052921
CDS Infomation

pacid=37445668 polypeptide=PGSC0003DMP400035686 locus=PGSC0003DMG400020530 ID=PGSC0003DMT400052921.v4.03 annot-version=v4.03
Sequence

ATGCATCCGTTGAATGCAGTGGCCGTGGTTCGAATGGCAACGAGGAACGGGGATGTCCCA
GCTGGTCTGGGGGCAGAAATAGCATTTGGGACGGTGTCATGGTTTGTCTACGCTGGGATC
TCATGTGTCTTAGTACTCTTTGCTGGAATTATGTCCGGATTAACACTGGGTCTCATGTCT
TTGGGTCTCGTTGAACTTGAGATCCTTCAACGAAGTGGCACCCGCTCTGAGAAAGACCAA
GCAGCTACAATCCTTCCTGTTGTTCAGAAGCAACATCAGCTTCTTGTCACACTACTTCTT
TGTAATGCTGCTGCAATGGAGGCCCTGCCTCTATACCTGGATAAGCTTTTCAACCAATAT
CTGGCCATTATACTATCAGTAACTTTCGTTTTGTTTTTTGGAGAGGTTATTCCTCAAGCA
ATATGCACAAGATATGGACTTGCAGTAGGTTCTAACTTTGTTTGGCTTGTTCGTATTTTG
ATGTTCCTATGCTATCCTATTGCTTACCCCATCGGAAAGATCCTAGATTGTGTATTGGGA
CATAATGAAGTACTATTTAGAAGAGCTCAGTTGAAGGCCCTTGTTTCAATCCACAGTCGA
GAGGCTGGCAAGGGAGGTGATCTCACACATGATGAGACAACAATCATTAGCGGAGCACTC
GATTTGACTGAGAAGACTGCTGAGGAGGCTATGACACCCATCGAGTCAACATTTTCATTG
GATGTCAATTCAAAGCTCGACTGGGAGGCTATGGGAAAAATTCTTGCACGGGGTCATAGT
CGTGTTCCTGTCTACTCTGCAAATCCAAAGAATGTTATTGGACTTCTACTGGTAAAAAGT
CTTCTTACTGTAAGGGCCGAGACAGAGACACCAGTTAGTGCAGTTTCTATTCGCAGAATT
CCACGTGTTCCTGCTGATATGCCTCTATACGACATACTTAACGAGTTTCAAAAAGGTAGC
AGTCATATGGCTGCAGTGGTGAAGGCAAAAGGGAAAAGCAAAAAGCCTCCCTCACAGAAA
CCTGAAGCCAACAGTGAAAATTCTCTAGAAACTGCTCCTCTTCTGATGAAAAAGGACGGG
AAGTCAGATAATGTGGTTGTTGATATAGACAAGGCTATACTGCCATCAGTATATACATCA
GGTGATGCAGTGACAAATAGTGTGCTTCATTCATCAGATGATATTGAGGATGCTGAAGTA
ATCGGTATTATCACCTTGGAAGATGTATTTGAAGAACTGTTACAGGAGGAAATTGTGGAT
GAGACGGATGAGTATGTTGATGTACATAAGAGGATACGTGTGGCTGCAGCAGCTGCTGCT
TCATCAGTAGCACGAGCACCTTCAATCCGGAAGTTGACAGCTCAAAAGGCAGCTGGAGGC
CAAAGTAAACAAAGACAAGCACCTAAGAAGTCGAGTGAGGAAGTTTCCAGCTCAAGAAGG
ATACAAGGGAGCATTGACGAGCCTCTACTGGAAGACAAGAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400035686
PEP Infomation

pacid=37445668 transcript=PGSC0003DMT400052921 locus=PGSC0003DMG400020530 ID=PGSC0003DMT400052921.v4.03 annot-version=v4.03
Sequence

MHPLNAVAVVRMATRNGDVPAGLGAEIAFGTVSWFVYAGISCVLVLFAGIMSGLTLGLMS
LGLVELEILQRSGTRSEKDQAATILPVVQKQHQLLVTLLLCNAAAMEALPLYLDKLFNQY
LAIILSVTFVLFFGEVIPQAICTRYGLAVGSNFVWLVRILMFLCYPIAYPIGKILDCVLG
HNEVLFRRAQLKALVSIHSREAGKGGDLTHDETTIISGALDLTEKTAEEAMTPIESTFSL
DVNSKLDWEAMGKILARGHSRVPVYSANPKNVIGLLLVKSLLTVRAETETPVSAVSIRRI
PRVPADMPLYDILNEFQKGSSHMAAVVKAKGKSKKPPSQKPEANSENSLETAPLLMKKDG
KSDNVVVDIDKAILPSVYTSGDAVTNSVLHSSDDIEDAEVIGIITLEDVFEELLQEEIVD
ETDEYVDVHKRIRVAAAAAASSVARAPSIRKLTAQKAAGGQSKQRQAPKKSSEEVSSSRR
IQGSIDEPLLEDKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400052921
Transcript Infomation

pacid=37445668 locus=PGSC0003DMG400020530 ID=PGSC0003DMT400052921.v4.03 annot-version=v4.03
Sequence

ATGCATCCGTTGAATGCAGTGGCCGTGGTTCGAATGGCAACGAGGAACGGGGATGTCCCA
GCTGGTCTGGGGGCAGAAATAGCATTTGGGACGGTGTCATGGTTTGTCTACGCTGGGATC
TCATGTGTCTTAGTACTCTTTGCTGGAATTATGTCCGGATTAACACTGGGTCTCATGTCT
TTGGGTCTCGTTGAACTTGAGATCCTTCAACGAAGTGGCACCCGCTCTGAGAAAGACCAA
GCAGCTACAATCCTTCCTGTTGTTCAGAAGCAACATCAGCTTCTTGTCACACTACTTCTT
TGTAATGCTGCTGCAATGGAGGCCCTGCCTCTATACCTGGATAAGCTTTTCAACCAATAT
CTGGCCATTATACTATCAGTAACTTTCGTTTTGTTTTTTGGAGAGGTTATTCCTCAAGCA
ATATGCACAAGATATGGACTTGCAGTAGGTTCTAACTTTGTTTGGCTTGTTCGTATTTTG
ATGTTCCTATGCTATCCTATTGCTTACCCCATCGGAAAGATCCTAGATTGTGTATTGGGA
CATAATGAAGTACTATTTAGAAGAGCTCAGTTGAAGGCCCTTGTTTCAATCCACAGTCGA
GAGGCTGGCAAGGGAGGTGATCTCACACATGATGAGACAACAATCATTAGCGGAGCACTC
GATTTGACTGAGAAGACTGCTGAGGAGGCTATGACACCCATCGAGTCAACATTTTCATTG
GATGTCAATTCAAAGCTCGACTGGGAGGCTATGGGAAAAATTCTTGCACGGGGTCATAGT
CGTGTTCCTGTCTACTCTGCAAATCCAAAGAATGTTATTGGACTTCTACTGGTAAAAAGT
CTTCTTACTGTAAGGGCCGAGACAGAGACACCAGTTAGTGCAGTTTCTATTCGCAGAATT
CCACGTGTTCCTGCTGATATGCCTCTATACGACATACTTAACGAGTTTCAAAAAGGTAGC
AGTCATATGGCTGCAGTGGTGAAGGCAAAAGGGAAAAGCAAAAAGCCTCCCTCACAGAAA
CCTGAAGCCAACAGTGAAAATTCTCTAGAAACTGCTCCTCTTCTGATGAAAAAGGACGGG
AAGTCAGATAATGTGGTTGTTGATATAGACAAGGCTATACTGCCATCAGTATATACATCA
GGTGATGCAGTGACAAATAGTGTGCTTCATTCATCAGATGATATTGAGGATGCTGAAGTA
ATCGGTATTATCACCTTGGAAGATGTATTTGAAGAACTGTTACAGGAGGAAATTGTGGAT
GAGACGGATGAGTATGTTGATGTACATAAGAGGATACGTGTGGCTGCAGCAGCTGCTGCT
TCATCAGTAGCACGAGCACCTTCAATCCGGAAGTTGACAGCTCAAAAGGCAGCTGGAGGC
CAAAGTAAACAAAGACAAGCACCTAAGAAGTCGAGTGAGGAAGTTTCCAGCTCAAGAAGG
ATACAAGGGAGCATTGACGAGCCTCTACTGGAAGACAAGAGATAA