Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052897
CDS Infomation

pacid=37448430 polypeptide=PGSC0003DMP400035672 locus=PGSC0003DMG400020522 ID=PGSC0003DMT400052897.v4.03 annot-version=v4.03
Sequence

ATGGAAGAATGTAATCGAGTTGAAGATGTAGAGGAGGGTGAGATCTCAGATTCGGCTTCA
GTTGAAGAAATAAGTGAGGATGCGTTCAATAGGCAAGACCCACCTACTACTACTAAGATT
AAGATTGCGAGTAATGAAAATCAAAATCAAAATTCGACGACGACGACTAGGGTTTGGACG
ATGAGAGATGCATATAAATATCCAATTTCTAGGGATTATGCTAGAGGTTTGTATAACCTG
GCTTGGGCTCAGGCTGTGCAGAATAAGCCTTTAGACGAACTATTCGTCATGACTAGTGAC
AATTCCAACCAGTGTGCTAATGCTAATGCTAATGTTGAATCCAAGGTCATCATTGATGTG
GATGTGGATGACGATGCTAAAGAGGAAGGAGAGTTGGAGGAAGGCGAGATCGACTTGGAT
GCCGCTGACCTAGTTCTAAATTTTGGAAAGGAGGCCAATTTCGTTAGGGAACAACTTCAG
AGTGTTACTCTAGACGAAACCCACAAATCCTTTTCTATGGTTTGTTCCAAATTGCAAACT
TCATTACTGGCCTTGGGGGAACTAGCTCTTTCTCAAGACAAGAATGACATTCTTATTCAA
CTCTTTATGACTGCACTCCGAACCATTAATTCTGTTTTTTACTCCATGAACCAGGATCAG
AAGCAACAAAACACAGATATTCTATCTAGGTTGCTTTTTCATGCAAAGACACAATTACCT
GCTCTTTTGTCTTCTGAGCAGTTAAAAGAGGTGGATGCTGTGATTCTCTCTATTAACCAG
TCAGCTGTTTTCTCAAATACTCAAGACAATGACAAGGTCAATGGGATCAAAGTTGTTGAA
CTGTTAGATAAGAAGGTTTCTCATAAATCCTCTGAAAATGCAAATCAGGATTTTACTGCT
GTAAACAAGTATGATTTAGGTGCTGTATCTATCAAATCTTCAGGCCTGAAGGAACAGAGT
GTGTCATTTGAATCTGTAAAACCAGGATTAGCCAATTCTAAAGCTAAAGGGTTATCCATT
CCTTTGCTAGACCTCCATAAGGACCATGATGAAGATACTCTTCCGTCGCCTACACGAGAG
ATTGGACCACAGTTCCCTGTTGCAAAAGCTACACAGGCTCATGGAATGGTGAAACTGGAC
TTGCCTATTTTTGCGGGTTCTCTTGAGAAAGGGAATTCTTTATTGCATCCTTATGAAACT
GATGCCCTTAAAGCTGTTTCCTCTTATCAACAAAAATTTGGTCGAAGTTCCCTTTTTGTT
AGTGAAAACCTTCCAAGTCCAACTCCGTCTGAAGAGGGTGATAGTGGCAAAGGGGACATT
GGTGGGGAGGTCACCAGTCTTGATGTTGTACATAATGCTAGCCATCTGAATGAATCTAGC
ATGGGGCAACCAATATTGTCTTCTGTTCCCCAGACCAATATTCTTGATGGACAAGGACTG
GGAACTGCTCGGACTGCAGATCCTCTGAGTTTTCTGCCAAATCCTTCTTTGCGATCTTCT
ACAGCAAAAAGTAGAGATCCCAGACTCAGACTGGCAACCAGCGATGCAGTTGCTCAGAAC
ACGAATAAAAATATCTTGCCTATCCCAGACATTGATTTGAAATTGGAGGCTTCTTTAGAG
ATGATTGGTTCAAAAAAGCAGAAGACAGTAGACCTACCAGTCTTTGGTGCTCCATTGCCG
AAAAGACAAAGAAGTGAACAGACTGATTCAATCATTGTGAGTGATGTGCGTCCTTCGACT
GGAAATGGTGGTTGGTTAGAGGATAGAGGGACTGCTGGGTTGCCAATTACGAGTAGTAAC
TGTGCTACAGATAGCAGTGACAATGATATTAGGAAATTGGAGCAAGTAACAGCTACTATC
GCTACTATACCTAGTGTCATAGTTAATGCTGCTGAGAACTTTCCAGTGACTGGCATTAGC
ACGTCAACAACTTTGCATTCTTTGTTAAAAGATATAGCTATAAATCCATCGATATGGATG
AATATAATCAAGATGGAACAGCAGAAATCTGCTGATGCTTCTAGAACTACTACAGCACAA
GCTTCAAGTTCTAAATCTATTCTTGGAGCAGTTCCATCAACGGATGCAATAGCTCCCAGA
TCTTCTGCTATTGGCCAGAGATCAGTAGGAATACTTCAGACTCCTACACACACAGCATCA
GCGGATGAAGTGGCTATAGTCCGCATGAAACCTCGTGACCCTCGGCGTGTTCTTCATAAT
ACTGCAGTTCTAAAGGGTGGTAATGTTGGATCAGATCAATGTAAAACTGGTGTAGCAGGC
ACACACGCAACGATAAGCAATCTTGGTTTCCAAAGTCAAGAGGACCAGTTGGATAGGAAG
TCAGCTGTGACTCTTTCGACTACACCACCAGACATTGCTCGCCAATTCACCAAAAATTTG
AAAAATATTGCTGACATGATCTCTGTTTCACCATCCACATCACTGTCTGCTGCTTCTCAA
ACTCAGACACAATGCCTACAATCTCATCAGAGTAGATCGGAAGGTAAGGAAGCAGTTTCT
GAACCAAGTGAACGGGTGAATGATGCTGGCTTAGCTTCTGAAAAAGGTTCTCCTGGTTCA
TTGCAACCACAGATCTCTTGGGGAGATGTTGAGCATCTATTTGAGGGGTACAGCGACCAA
CAGAGAGCTGATATCCAGAGAGAAAGGGCTAGGAGGCTTGAGGAACAGAAAAAAATGTTT
TCTGTTCGGAAGCTCTGTCTCGTCTTGGACTTGGACCATACTCTTCTGAATTCAGCAAAG
TTTGTTGAAATCGACCCAGTTCATGAAGAGATATTGAGGAAGAAAGAGGAACAAGACCGT
GAAAAGCCGTGTAGGCACCTATTCCGGTTTCCACACATGGGAATGTGGACCAAGTTACGG
CCTGGGATTTGGAATTTCTTGGAAAAGGCTAGCAATCTTTTTGAGCTGCATCTCTATACC
ATGGGTAACAAGCTATATGCCACGGAGATGGCCAAATTGCTAGATCCAAAAGGGGATCTG
TTTGCTGGACGAGTGATCTCCAGGGGTGACGATGGAGATCCATTTGATGGGGATGAAAGG
GTTCCTAAGAGTAAGGACTTGGAGGGGGTTTTGGGCATGGAGTCAGCTGTTGTGATTATT
GATGATTCTGTGAGAGTCTGGCCACATAACAAGCTAAATTTGATTGTTGTAGAGAGGTAT
ATTTACTTTCCTTGCAGTAGACGGCAATTTGGTCTCCCTGGTCCTTCTCTTCTTGAGATT
GATCATGATGAAAGACCAGAAGATGGGACATTGGCCTCTTGTTTGGGGGTTATTCAAAGA
ATACATCAGAATTTTTTCGCACATCGGTCCATAGATGAAGCTGATGTTAGGAACATTTTA
GCGACAGAACAAAAAAAGATTCTGGCAGGTTGCCGTATTGTCTTCAGCAGAGTGTTCCCT
GTTGGTGAAGCCAATCCTCATTTGCATCCTCTGTGGCAGACAGCTGAACAGTTTGGTGCT
GTCTGCACTAGTCAAATTGATGATCAGGTTACCCATGTGGTTGCAAATTCTCTTGGGACG
GATAAGGTTAATTGGGCACTTTCCACCGGACGATTTGTTGTTCATCCTGGCTGGGTGGAG
GCATCAGCTTTACTTTATCGGAGGGCAAATGAGCATGATTTTGCTATTAAATCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035672
PEP Infomation

pacid=37448430 transcript=PGSC0003DMT400052897 locus=PGSC0003DMG400020522 ID=PGSC0003DMT400052897.v4.03 annot-version=v4.03
Sequence

MEECNRVEDVEEGEISDSASVEEISEDAFNRQDPPTTTKIKIASNENQNQNSTTTTRVWT
MRDAYKYPISRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCANANANVESKVIIDV
DVDDDAKEEGELEEGEIDLDAADLVLNFGKEANFVREQLQSVTLDETHKSFSMVCSKLQT
SLLALGELALSQDKNDILIQLFMTALRTINSVFYSMNQDQKQQNTDILSRLLFHAKTQLP
ALLSSEQLKEVDAVILSINQSAVFSNTQDNDKVNGIKVVELLDKKVSHKSSENANQDFTA
VNKYDLGAVSIKSSGLKEQSVSFESVKPGLANSKAKGLSIPLLDLHKDHDEDTLPSPTRE
IGPQFPVAKATQAHGMVKLDLPIFAGSLEKGNSLLHPYETDALKAVSSYQQKFGRSSLFV
SENLPSPTPSEEGDSGKGDIGGEVTSLDVVHNASHLNESSMGQPILSSVPQTNILDGQGL
GTARTADPLSFLPNPSLRSSTAKSRDPRLRLATSDAVAQNTNKNILPIPDIDLKLEASLE
MIGSKKQKTVDLPVFGAPLPKRQRSEQTDSIIVSDVRPSTGNGGWLEDRGTAGLPITSSN
CATDSSDNDIRKLEQVTATIATIPSVIVNAAENFPVTGISTSTTLHSLLKDIAINPSIWM
NIIKMEQQKSADASRTTTAQASSSKSILGAVPSTDAIAPRSSAIGQRSVGILQTPTHTAS
ADEVAIVRMKPRDPRRVLHNTAVLKGGNVGSDQCKTGVAGTHATISNLGFQSQEDQLDRK
SAVTLSTTPPDIARQFTKNLKNIADMISVSPSTSLSAASQTQTQCLQSHQSRSEGKEAVS
EPSERVNDAGLASEKGSPGSLQPQISWGDVEHLFEGYSDQQRADIQRERARRLEEQKKMF
SVRKLCLVLDLDHTLLNSAKFVEIDPVHEEILRKKEEQDREKPCRHLFRFPHMGMWTKLR
PGIWNFLEKASNLFELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGDER
VPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEI
DHDERPEDGTLASCLGVIQRIHQNFFAHRSIDEADVRNILATEQKKILAGCRIVFSRVFP
VGEANPHLHPLWQTAEQFGAVCTSQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVE
ASALLYRRANEHDFAIKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400052897
Transcript Infomation

pacid=37448430 locus=PGSC0003DMG400020522 ID=PGSC0003DMT400052897.v4.03 annot-version=v4.03
Sequence

ATGGAAGAATGTAATCGAGTTGAAGATGTAGAGGAGGGTGAGATCTCAGATTCGGCTTCA
GTTGAAGAAATAAGTGAGGATGCGTTCAATAGGCAAGACCCACCTACTACTACTAAGATT
AAGATTGCGAGTAATGAAAATCAAAATCAAAATTCGACGACGACGACTAGGGTTTGGACG
ATGAGAGATGCATATAAATATCCAATTTCTAGGGATTATGCTAGAGGTTTGTATAACCTG
GCTTGGGCTCAGGCTGTGCAGAATAAGCCTTTAGACGAACTATTCGTCATGACTAGTGAC
AATTCCAACCAGTGTGCTAATGCTAATGCTAATGTTGAATCCAAGGTCATCATTGATGTG
GATGTGGATGACGATGCTAAAGAGGAAGGAGAGTTGGAGGAAGGCGAGATCGACTTGGAT
GCCGCTGACCTAGTTCTAAATTTTGGAAAGGAGGCCAATTTCGTTAGGGAACAACTTCAG
AGTGTTACTCTAGACGAAACCCACAAATCCTTTTCTATGGTTTGTTCCAAATTGCAAACT
TCATTACTGGCCTTGGGGGAACTAGCTCTTTCTCAAGACAAGAATGACATTCTTATTCAA
CTCTTTATGACTGCACTCCGAACCATTAATTCTGTTTTTTACTCCATGAACCAGGATCAG
AAGCAACAAAACACAGATATTCTATCTAGGTTGCTTTTTCATGCAAAGACACAATTACCT
GCTCTTTTGTCTTCTGAGCAGTTAAAAGAGGTGGATGCTGTGATTCTCTCTATTAACCAG
TCAGCTGTTTTCTCAAATACTCAAGACAATGACAAGGTCAATGGGATCAAAGTTGTTGAA
CTGTTAGATAAGAAGGTTTCTCATAAATCCTCTGAAAATGCAAATCAGGATTTTACTGCT
GTAAACAAGTATGATTTAGGTGCTGTATCTATCAAATCTTCAGGCCTGAAGGAACAGAGT
GTGTCATTTGAATCTGTAAAACCAGGATTAGCCAATTCTAAAGCTAAAGGGTTATCCATT
CCTTTGCTAGACCTCCATAAGGACCATGATGAAGATACTCTTCCGTCGCCTACACGAGAG
ATTGGACCACAGTTCCCTGTTGCAAAAGCTACACAGGCTCATGGAATGGTGAAACTGGAC
TTGCCTATTTTTGCGGGTTCTCTTGAGAAAGGGAATTCTTTATTGCATCCTTATGAAACT
GATGCCCTTAAAGCTGTTTCCTCTTATCAACAAAAATTTGGTCGAAGTTCCCTTTTTGTT
AGTGAAAACCTTCCAAGTCCAACTCCGTCTGAAGAGGGTGATAGTGGCAAAGGGGACATT
GGTGGGGAGGTCACCAGTCTTGATGTTGTACATAATGCTAGCCATCTGAATGAATCTAGC
ATGGGGCAACCAATATTGTCTTCTGTTCCCCAGACCAATATTCTTGATGGACAAGGACTG
GGAACTGCTCGGACTGCAGATCCTCTGAGTTTTCTGCCAAATCCTTCTTTGCGATCTTCT
ACAGCAAAAAGTAGAGATCCCAGACTCAGACTGGCAACCAGCGATGCAGTTGCTCAGAAC
ACGAATAAAAATATCTTGCCTATCCCAGACATTGATTTGAAATTGGAGGCTTCTTTAGAG
ATGATTGGTTCAAAAAAGCAGAAGACAGTAGACCTACCAGTCTTTGGTGCTCCATTGCCG
AAAAGACAAAGAAGTGAACAGACTGATTCAATCATTGTGAGTGATGTGCGTCCTTCGACT
GGAAATGGTGGTTGGTTAGAGGATAGAGGGACTGCTGGGTTGCCAATTACGAGTAGTAAC
TGTGCTACAGATAGCAGTGACAATGATATTAGGAAATTGGAGCAAGTAACAGCTACTATC
GCTACTATACCTAGTGTCATAGTTAATGCTGCTGAGAACTTTCCAGTGACTGGCATTAGC
ACGTCAACAACTTTGCATTCTTTGTTAAAAGATATAGCTATAAATCCATCGATATGGATG
AATATAATCAAGATGGAACAGCAGAAATCTGCTGATGCTTCTAGAACTACTACAGCACAA
GCTTCAAGTTCTAAATCTATTCTTGGAGCAGTTCCATCAACGGATGCAATAGCTCCCAGA
TCTTCTGCTATTGGCCAGAGATCAGTAGGAATACTTCAGACTCCTACACACACAGCATCA
GCGGATGAAGTGGCTATAGTCCGCATGAAACCTCGTGACCCTCGGCGTGTTCTTCATAAT
ACTGCAGTTCTAAAGGGTGGTAATGTTGGATCAGATCAATGTAAAACTGGTGTAGCAGGC
ACACACGCAACGATAAGCAATCTTGGTTTCCAAAGTCAAGAGGACCAGTTGGATAGGAAG
TCAGCTGTGACTCTTTCGACTACACCACCAGACATTGCTCGCCAATTCACCAAAAATTTG
AAAAATATTGCTGACATGATCTCTGTTTCACCATCCACATCACTGTCTGCTGCTTCTCAA
ACTCAGACACAATGCCTACAATCTCATCAGAGTAGATCGGAAGGTAAGGAAGCAGTTTCT
GAACCAAGTGAACGGGTGAATGATGCTGGCTTAGCTTCTGAAAAAGGTTCTCCTGGTTCA
TTGCAACCACAGATCTCTTGGGGAGATGTTGAGCATCTATTTGAGGGGTACAGCGACCAA
CAGAGAGCTGATATCCAGAGAGAAAGGGCTAGGAGGCTTGAGGAACAGAAAAAAATGTTT
TCTGTTCGGAAGCTCTGTCTCGTCTTGGACTTGGACCATACTCTTCTGAATTCAGCAAAG
TTTGTTGAAATCGACCCAGTTCATGAAGAGATATTGAGGAAGAAAGAGGAACAAGACCGT
GAAAAGCCGTGTAGGCACCTATTCCGGTTTCCACACATGGGAATGTGGACCAAGTTACGG
CCTGGGATTTGGAATTTCTTGGAAAAGGCTAGCAATCTTTTTGAGCTGCATCTCTATACC
ATGGGTAACAAGCTATATGCCACGGAGATGGCCAAATTGCTAGATCCAAAAGGGGATCTG
TTTGCTGGACGAGTGATCTCCAGGGGTGACGATGGAGATCCATTTGATGGGGATGAAAGG
GTTCCTAAGAGTAAGGACTTGGAGGGGGTTTTGGGCATGGAGTCAGCTGTTGTGATTATT
GATGATTCTGTGAGAGTCTGGCCACATAACAAGCTAAATTTGATTGTTGTAGAGAGGTAT
ATTTACTTTCCTTGCAGTAGACGGCAATTTGGTCTCCCTGGTCCTTCTCTTCTTGAGATT
GATCATGATGAAAGACCAGAAGATGGGACATTGGCCTCTTGTTTGGGGGTTATTCAAAGA
ATACATCAGAATTTTTTCGCACATCGGTCCATAGATGAAGCTGATGTTAGGAACATTTTA
GCGACAGAACAAAAAAAGATTCTGGCAGGTTGCCGTATTGTCTTCAGCAGAGTGTTCCCT
GTTGGTGAAGCCAATCCTCATTTGCATCCTCTGTGGCAGACAGCTGAACAGTTTGGTGCT
GTCTGCACTAGTCAAATTGATGATCAGGTTACCCATGTGGTTGCAAATTCTCTTGGGACG
GATAAGGTTAATTGGGCACTTTCCACCGGACGATTTGTTGTTCATCCTGGCTGGGTGGAG
GCATCAGCTTTACTTTATCGGAGGGCAAATGAGCATGATTTTGCTATTAAATCTTAA