Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052881
CDS Infomation

pacid=37469354 polypeptide=PGSC0003DMP400035657 locus=PGSC0003DMG400020517 ID=PGSC0003DMT400052881.v4.03 annot-version=v4.03
Sequence

ATGGGAGGAGGATTTTCGCAGCTGTTTCCATGTCTTGACCCGGCGGTGAACCGGGGTGAA
CCGGAGGTGATCTTTACCGGAAGTGAACCGCTTGATGAAACACTTGGTCATTCCTTCTGC
TATGTGAGGTCGTCAGCCCGGTTAGTTTCTCCGACCAATTCAGATCGATTTGTTTCACCT
TCTCAGTCACTCCGGTTTGATGAACCGGGGAGGAACAGACTGACCGGTTCGGCGGAAACC
GGATTCAGAGCGATTTCCGGTGCTTCTGTAAGTGCAAATACCTCGACTCCTAGAACTGTC
CTCCAACTTGACAATATTTACGATGATGCCACTGGTAGTGATGGGAGTGTTGTGGGTTTT
GCTTGTGGTGTAAAGGGTAGTGTTGTCAATGGGTTTGAAAGTACGTCGTCGTTTTGTGCT
TTACCTCTTCAACCGGTTCCTCGCGGCGGCGAACCATCCGGTCCAATGGAAAGAGCGTTT
TTTATGTCCGGTCCAATTGAGCGAGGTGCTCTATCTGGACCGCTAGACACTGCTGCTAGC
TCCGATGGCGGCGGTGGAGTTCCCTTCTCAGCTCCATTAGGTGGAGCTTATGTAAAAAAG
AGAAGGAAGAATGGCATTGCAGGAATTAGGAAGGCATTCTACCGGAGCTTCTCTGAGAAA
AAGCGGCCTTGGGTGGTTCCGGTGAGAAACTTCATTGGGAGAAAGGAAATGACAGCTGCC
GGAAACTGTACTCGTGATTCGGATGCAGGGAGTGATTCAAATGTTCAATGGGCATTGGGA
AAAGCCGGTGAGGATCGTGTGCATGTGGTCGTATCGGAAGAGCATGGATGGCTCTTTGTT
GGGATTTATGATGGTTTTAATGGCCCAGATGGACCTGAATTCTTGATGAGTCATCTGTAC
AAAGCAATGTACAAAGAATTAGAGGGTTTGTTTTGGGATAGTGAAGAAACTAGTAATCAG
GAAGCAGAAAATGCAGGTTTAGAAAACGAAGTGATCACTGAGGACTCGAACGAACCAAAT
TCAAATCGAGAAGCTAACCCCACAAATAGGGGAGTTGAAGAAGGTGGAAATGAGGTTAAT
TTGGAACATCCAGATAAAGGGTCGGAAAAGAAGGTGACATTTCAATCAGGGGAAATAGTG
GTTAGGAGGAGGAGATTGTGGGAATACTTAGCAGAAGCTGAGACAGAGGATGGTCTTGAT
CTTTCGGGTTCGGATAGATTTGCATTTTCAGTAGATGACGCGTTAAGTGTAAATAGTGCA
GGTTCAGCAGTTAATAGGAGGTCGTTGTTGTTGTCGAAGTTGAAACACGGATTGTTAATT
AAGCATAAAGAGAGTAAGAGGTTATTTCCATGGAAATTTGGATTGCAAGCTAAAGAGAAA
GTTGAAGTAGGGGAGAATAGAGTAGAAGAAAGGACTAATAGAAGTGAACGGAGGCGTAAG
GTGGGCCCGGTTGACCATGAGTTAGTTTTGAGAGCAATGTCAAGAGCTCTCGAATTCACT
GAACTCGCATACTTGGATATGACAGATAAAGTTCTTGATCGGTATCCTGAGCTTGCATTA
ATGGGTTCATGTTTGTTGGTTGCTCTGATGAGAGATGAAGATGTGTATGTAATGAATGCG
GGAGATAGTCGTGCTATTGTGGCACAGTACGAGCCTGAGGAGGTTAGTTGTAGTTCAGAA
TCAAGAGGTCCATGTAACAGTGAGTTGGCCGTTGAGGGCATTGTTGAAGAACCCATAGTT
GCCGGCGATGAGGAAAGTAGGGTGATGAATGATATACCTATTCAAGCTGCTAAGCTGACT
GCCTTGCAATTGTCTACCGATCACAGCACCAGCATTGAGGAAGAAGTTACTAGAATTAAG
AATGAACACCCAGATGACAGCAACTGCATTATTAATGATAGAGTGAAAGGCCGTCTAAAG
GTCACTCGTGCTTTTGGAGCGGGCTTCCTTAAAAAGCCTAAATTGAATGAGCCATTGCTA
GAAATGTTTCGGAACGAGTATATTGGGGATGCTCCTTATCTGTCTTGTACGCCTTCGCTG
CGACATCATAAACTGTGTCCTAGAGATCAGTTTTTGGTGCTCTCCTCTGATGGCTTATAC
CAATATTTGAGCAATCTGGAGGTTGTTTGTCATATTGAGAATTTCATGGAGAAATTTCCT
GATGGGGATCCTGCTCAGCATCTGATTGAGGAGCTCTTATTCCGTGCAGCCAAGAAAGCT
GGAATGGATTTACATGAATTACTGGACATCCCCCAAGGAGATCGTAGGAAGTACCACGAT
GATGTTACAGTTATGGTGGTATCTCTAGAAGGAAGAATTTGGAAGTCGTCTGGGAAGTAC
CTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035657
PEP Infomation

pacid=37469354 transcript=PGSC0003DMT400052881 locus=PGSC0003DMG400020517 ID=PGSC0003DMT400052881.v4.03 annot-version=v4.03
Sequence

MGGGFSQLFPCLDPAVNRGEPEVIFTGSEPLDETLGHSFCYVRSSARLVSPTNSDRFVSP
SQSLRFDEPGRNRLTGSAETGFRAISGASVSANTSTPRTVLQLDNIYDDATGSDGSVVGF
ACGVKGSVVNGFESTSSFCALPLQPVPRGGEPSGPMERAFFMSGPIERGALSGPLDTAAS
SDGGGGVPFSAPLGGAYVKKRRKNGIAGIRKAFYRSFSEKKRPWVVPVRNFIGRKEMTAA
GNCTRDSDAGSDSNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDGPEFLMSHLY
KAMYKELEGLFWDSEETSNQEAENAGLENEVITEDSNEPNSNREANPTNRGVEEGGNEVN
LEHPDKGSEKKVTFQSGEIVVRRRRLWEYLAEAETEDGLDLSGSDRFAFSVDDALSVNSA
GSAVNRRSLLLSKLKHGLLIKHKESKRLFPWKFGLQAKEKVEVGENRVEERTNRSERRRK
VGPVDHELVLRAMSRALEFTELAYLDMTDKVLDRYPELALMGSCLLVALMRDEDVYVMNA
GDSRAIVAQYEPEEVSCSSESRGPCNSELAVEGIVEEPIVAGDEESRVMNDIPIQAAKLT
ALQLSTDHSTSIEEEVTRIKNEHPDDSNCIINDRVKGRLKVTRAFGAGFLKKPKLNEPLL
EMFRNEYIGDAPYLSCTPSLRHHKLCPRDQFLVLSSDGLYQYLSNLEVVCHIENFMEKFP
DGDPAQHLIEELLFRAAKKAGMDLHELLDIPQGDRRKYHDDVTVMVVSLEGRIWKSSGKY
L*

Transcript Sequence

Transcript ID

PGSC0003DMT400052881
Transcript Infomation

pacid=37469354 locus=PGSC0003DMG400020517 ID=PGSC0003DMT400052881.v4.03 annot-version=v4.03
Sequence

ATGGGAGGAGGATTTTCGCAGCTGTTTCCATGTCTTGACCCGGCGGTGAACCGGGGTGAA
CCGGAGGTGATCTTTACCGGAAGTGAACCGCTTGATGAAACACTTGGTCATTCCTTCTGC
TATGTGAGGTCGTCAGCCCGGTTAGTTTCTCCGACCAATTCAGATCGATTTGTTTCACCT
TCTCAGTCACTCCGGTTTGATGAACCGGGGAGGAACAGACTGACCGGTTCGGCGGAAACC
GGATTCAGAGCGATTTCCGGTGCTTCTGTAAGTGCAAATACCTCGACTCCTAGAACTGTC
CTCCAACTTGACAATATTTACGATGATGCCACTGGTAGTGATGGGAGTGTTGTGGGTTTT
GCTTGTGGTGTAAAGGGTAGTGTTGTCAATGGGTTTGAAAGTACGTCGTCGTTTTGTGCT
TTACCTCTTCAACCGGTTCCTCGCGGCGGCGAACCATCCGGTCCAATGGAAAGAGCGTTT
TTTATGTCCGGTCCAATTGAGCGAGGTGCTCTATCTGGACCGCTAGACACTGCTGCTAGC
TCCGATGGCGGCGGTGGAGTTCCCTTCTCAGCTCCATTAGGTGGAGCTTATGTAAAAAAG
AGAAGGAAGAATGGCATTGCAGGAATTAGGAAGGCATTCTACCGGAGCTTCTCTGAGAAA
AAGCGGCCTTGGGTGGTTCCGGTGAGAAACTTCATTGGGAGAAAGGAAATGACAGCTGCC
GGAAACTGTACTCGTGATTCGGATGCAGGGAGTGATTCAAATGTTCAATGGGCATTGGGA
AAAGCCGGTGAGGATCGTGTGCATGTGGTCGTATCGGAAGAGCATGGATGGCTCTTTGTT
GGGATTTATGATGGTTTTAATGGCCCAGATGGACCTGAATTCTTGATGAGTCATCTGTAC
AAAGCAATGTACAAAGAATTAGAGGGTTTGTTTTGGGATAGTGAAGAAACTAGTAATCAG
GAAGCAGAAAATGCAGGTTTAGAAAACGAAGTGATCACTGAGGACTCGAACGAACCAAAT
TCAAATCGAGAAGCTAACCCCACAAATAGGGGAGTTGAAGAAGGTGGAAATGAGGTTAAT
TTGGAACATCCAGATAAAGGGTCGGAAAAGAAGGTGACATTTCAATCAGGGGAAATAGTG
GTTAGGAGGAGGAGATTGTGGGAATACTTAGCAGAAGCTGAGACAGAGGATGGTCTTGAT
CTTTCGGGTTCGGATAGATTTGCATTTTCAGTAGATGACGCGTTAAGTGTAAATAGTGCA
GGTTCAGCAGTTAATAGGAGGTCGTTGTTGTTGTCGAAGTTGAAACACGGATTGTTAATT
AAGCATAAAGAGAGTAAGAGGTTATTTCCATGGAAATTTGGATTGCAAGCTAAAGAGAAA
GTTGAAGTAGGGGAGAATAGAGTAGAAGAAAGGACTAATAGAAGTGAACGGAGGCGTAAG
GTGGGCCCGGTTGACCATGAGTTAGTTTTGAGAGCAATGTCAAGAGCTCTCGAATTCACT
GAACTCGCATACTTGGATATGACAGATAAAGTTCTTGATCGGTATCCTGAGCTTGCATTA
ATGGGTTCATGTTTGTTGGTTGCTCTGATGAGAGATGAAGATGTGTATGTAATGAATGCG
GGAGATAGTCGTGCTATTGTGGCACAGTACGAGCCTGAGGAGGTTAGTTGTAGTTCAGAA
TCAAGAGGTCCATGTAACAGTGAGTTGGCCGTTGAGGGCATTGTTGAAGAACCCATAGTT
GCCGGCGATGAGGAAAGTAGGGTGATGAATGATATACCTATTCAAGCTGCTAAGCTGACT
GCCTTGCAATTGTCTACCGATCACAGCACCAGCATTGAGGAAGAAGTTACTAGAATTAAG
AATGAACACCCAGATGACAGCAACTGCATTATTAATGATAGAGTGAAAGGCCGTCTAAAG
GTCACTCGTGCTTTTGGAGCGGGCTTCCTTAAAAAGCCTAAATTGAATGAGCCATTGCTA
GAAATGTTTCGGAACGAGTATATTGGGGATGCTCCTTATCTGTCTTGTACGCCTTCGCTG
CGACATCATAAACTGTGTCCTAGAGATCAGTTTTTGGTGCTCTCCTCTGATGGCTTATAC
CAATATTTGAGCAATCTGGAGGTTGTTTGTCATATTGAGAATTTCATGGAGAAATTTCCT
GATGGGGATCCTGCTCAGCATCTGATTGAGGAGCTCTTATTCCGTGCAGCCAAGAAAGCT
GGAATGGATTTACATGAATTACTGGACATCCCCCAAGGAGATCGTAGGAAGTACCACGAT
GATGTTACAGTTATGGTGGTATCTCTAGAAGGAAGAATTTGGAAGTCGTCTGGGAAGTAC
CTCTAA