Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052839
CDS Infomation

pacid=37470844 polypeptide=PGSC0003DMP400035625 locus=PGSC0003DMG402020509 ID=PGSC0003DMT400052839.v4.03 annot-version=v4.03
Sequence

ATGGCTTTAACACCTTGTTCTTCAACTTCTTTTATCAATAAAAAAGAAAGAAAAAATTAT
AGAACACATGATGATATCTCAAGCATGATTTGCTTTGCTAAAATCAATCCACCATCATGC
AATCTCAAAGCAAAAAGTTCCAATCAAGAAGTTCAATTTTTGAATCCCAATATGGAAGAG
AAAGAGAAATTCCATATGCTCACAAGTGGTACTCATAGCAACAATAGTAGTACAAAAGTG
CCTGTTTTTGTGATGTTACCACTTGACACTATATCAATTGGAGGTAATATGAACAAGCCA
AGAGCTATGAATGCTAGTTTGATGGCATTAAAAAGTGCTGGAGTTGAAGGGGTAATGGTG
GATTGTTGGTGGGGTTTGGTTGAAAAAGATGGACCTTTGAAGTATAACTGGGAAGGATAT
GATGAACTTGTCAAGATGGTTCAAGCTAATGGATTGAAGCTTCAAGTTGTCATGTCTTTT
CATCAGTGTGGTGGTAACGTCGGAGATTCCTGCAGCATCCCTCTACCTCCATGGGTACTT
GAAGAAATTAGCAAAAACCCAGATCTTGTGTATACAGATAGATCAGGCAGGAGAAATCCT
GAGTACATTTCTTTAGGTTGTGATCAATTACCAGTACTTAGAGGAAGAACACCAATTCAA
GTCTACACTGATTATATGAGAAGCTTTAGAGAAAGATTCAAGAATTACTTAGGAGATGTT
ATAGTGGAAATACAAGTGGGAATGGGTCCTTGTGGTGAACTAAGATATCCATCTTATCCA
GAAAGCAATGGTACTTGGAGATTTCCTGGTATTGGTGAATTCCAATGCTATGACAAGTAC
ATGAAGGCTTCACTAGCAGCATCAGCAGATGCAATGGGAAACGAATCGTGGGGCCGAGGT
GGGCCCCACGATTCTGGTCAGTACAACCAGTTTCCAGAGGAAACTGGTTTTTTCAAAAAG
GATGGAACATGGAATAGTGAATATGGACAATTTTTCCTAGAATGGTATTCAAGAAAGTTA
TTAGAACATGGAGACAATATCCTAGCATCAGCAGAAGGCATATTCAAAGGAACAAGTTGT
AAATTATCAGGCAAAGTAGCTGGAATTCATTGGCATTATAACACAAGATCACATGCAGCA
GAGTTAACAGCAGGGTACTATAACACAAGGAACAAAGATGGTTATTTACCAATAGCACGT
ATGTTCGTGAAACGTGGGGTTGTTTTTAACTTTACTTGTATGGAAATGAGGGATGGAGAG
CAGCCACATAGCGCGAATTGCTCACCAGAAGGTTTGGTTCGACAAGTGAAAAACGCGACT
AGAAATGTTGGAGTAGAACTAGCTGGAGAAAACGCGTTAGAGAGGTATGATGGAGGAGGA
TATGCACAAGTTTTGAGTACAAGCAGAGCAGACTCTGGAAATGGATTGAGTGCATTTACA
TATTTGAGATTGAACAAAAGGTTGTTCGAGCCCGAGAATTGGAGAAATCTCGTTGAGTTT
GTGAAGAACATGTCCGAAGGAGGTAACACGAGGCTTCCAGAATGCGATTCGAGTAGGACA
GACTTGTATGTTAGATTTGTCAAACAGAGTCGTGCTAAGAAAAATGCAGAGGTTGCAGTT
GTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400035625
PEP Infomation

pacid=37470844 transcript=PGSC0003DMT400052839 locus=PGSC0003DMG402020509 ID=PGSC0003DMT400052839.v4.03 annot-version=v4.03
Sequence

MALTPCSSTSFINKKERKNYRTHDDISSMICFAKINPPSCNLKAKSSNQEVQFLNPNMEE
KEKFHMLTSGTHSNNSSTKVPVFVMLPLDTISIGGNMNKPRAMNASLMALKSAGVEGVMV
DCWWGLVEKDGPLKYNWEGYDELVKMVQANGLKLQVVMSFHQCGGNVGDSCSIPLPPWVL
EEISKNPDLVYTDRSGRRNPEYISLGCDQLPVLRGRTPIQVYTDYMRSFRERFKNYLGDV
IVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLAASADAMGNESWGRG
GPHDSGQYNQFPEETGFFKKDGTWNSEYGQFFLEWYSRKLLEHGDNILASAEGIFKGTSC
KLSGKVAGIHWHYNTRSHAAELTAGYYNTRNKDGYLPIARMFVKRGVVFNFTCMEMRDGE
QPHSANCSPEGLVRQVKNATRNVGVELAGENALERYDGGGYAQVLSTSRADSGNGLSAFT
YLRLNKRLFEPENWRNLVEFVKNMSEGGNTRLPECDSSRTDLYVRFVKQSRAKKNAEVAV
V*

Transcript Sequence

Transcript ID

PGSC0003DMT400052839
Transcript Infomation

pacid=37470844 locus=PGSC0003DMG402020509 ID=PGSC0003DMT400052839.v4.03 annot-version=v4.03
Sequence

ATGGCTTTAACACCTTGTTCTTCAACTTCTTTTATCAATAAAAAAGAAAGAAAAAATTAT
AGAACACATGATGATATCTCAAGCATGATTTGCTTTGCTAAAATCAATCCACCATCATGC
AATCTCAAAGCAAAAAGTTCCAATCAAGAAGTTCAATTTTTGAATCCCAATATGGAAGAG
AAAGAGAAATTCCATATGCTCACAAGTGGTACTCATAGCAACAATAGTAGTACAAAAGTG
CCTGTTTTTGTGATGTTACCACTTGACACTATATCAATTGGAGGTAATATGAACAAGCCA
AGAGCTATGAATGCTAGTTTGATGGCATTAAAAAGTGCTGGAGTTGAAGGGGTAATGGTG
GATTGTTGGTGGGGTTTGGTTGAAAAAGATGGACCTTTGAAGTATAACTGGGAAGGATAT
GATGAACTTGTCAAGATGGTTCAAGCTAATGGATTGAAGCTTCAAGTTGTCATGTCTTTT
CATCAGTGTGGTGGTAACGTCGGAGATTCCTGCAGCATCCCTCTACCTCCATGGGTACTT
GAAGAAATTAGCAAAAACCCAGATCTTGTGTATACAGATAGATCAGGCAGGAGAAATCCT
GAGTACATTTCTTTAGGTTGTGATCAATTACCAGTACTTAGAGGAAGAACACCAATTCAA
GTCTACACTGATTATATGAGAAGCTTTAGAGAAAGATTCAAGAATTACTTAGGAGATGTT
ATAGTGGAAATACAAGTGGGAATGGGTCCTTGTGGTGAACTAAGATATCCATCTTATCCA
GAAAGCAATGGTACTTGGAGATTTCCTGGTATTGGTGAATTCCAATGCTATGACAAGTAC
ATGAAGGCTTCACTAGCAGCATCAGCAGATGCAATGGGAAACGAATCGTGGGGCCGAGGT
GGGCCCCACGATTCTGGTCAGTACAACCAGTTTCCAGAGGAAACTGGTTTTTTCAAAAAG
GATGGAACATGGAATAGTGAATATGGACAATTTTTCCTAGAATGGTATTCAAGAAAGTTA
TTAGAACATGGAGACAATATCCTAGCATCAGCAGAAGGCATATTCAAAGGAACAAGTTGT
AAATTATCAGGCAAAGTAGCTGGAATTCATTGGCATTATAACACAAGATCACATGCAGCA
GAGTTAACAGCAGGGTACTATAACACAAGGAACAAAGATGGTTATTTACCAATAGCACGT
ATGTTCGTGAAACGTGGGGTTGTTTTTAACTTTACTTGTATGGAAATGAGGGATGGAGAG
CAGCCACATAGCGCGAATTGCTCACCAGAAGGTTTGGTTCGACAAGTGAAAAACGCGACT
AGAAATGTTGGAGTAGAACTAGCTGGAGAAAACGCGTTAGAGAGGTATGATGGAGGAGGA
TATGCACAAGTTTTGAGTACAAGCAGAGCAGACTCTGGAAATGGATTGAGTGCATTTACA
TATTTGAGATTGAACAAAAGGTTGTTCGAGCCCGAGAATTGGAGAAATCTCGTTGAGTTT
GTGAAGAACATGTCCGAAGGAGGTAACACGAGGCTTCCAGAATGCGATTCGAGTAGGACA
GACTTGTATGTTAGATTTGTCAAACAGAGTCGTGCTAAGAAAAATGCAGAGGTTGCAGTT
GTGTAG